Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm42462-201ENSMUST00000196543 1363 ntBASIC8.28□□□□□ -1.08
Nup88Q8CEC0 CT025639.1-201ENSMUST00000223906 1375 ntBASIC8.28□□□□□ -1.08
Nup88Q8CEC0 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
Nup88Q8CEC0 Gm13423-201ENSMUST00000117205 888 ntBASIC8.28□□□□□ -1.08
Nup88Q8CEC0 Gm6743-201ENSMUST00000117345 1066 ntBASIC8.28□□□□□ -1.08
Nup88Q8CEC0 Gm13260-201ENSMUST00000117797 1264 ntBASIC8.28□□□□□ -1.08
Nup88Q8CEC0 Gm15484-201ENSMUST00000118871 828 ntBASIC8.28□□□□□ -1.08
Nup88Q8CEC0 Gm12104-201ENSMUST00000120359 979 ntBASIC8.28□□□□□ -1.08
Nup88Q8CEC0 Olfr1017-ps1-201ENSMUST00000121263 664 ntBASIC8.28□□□□□ -1.08
Nup88Q8CEC0 Gm15096-201ENSMUST00000121918 878 ntBASIC8.28□□□□□ -1.08
Nup88Q8CEC0 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC8.28□□□□□ -1.08
Nup88Q8CEC0 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC8.28□□□□□ -1.08
Nup88Q8CEC0 9530046B11Rik-201ENSMUST00000149413 1157 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Nup88Q8CEC0 Gm26671-201ENSMUST00000180423 1157 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Nup88Q8CEC0 Gm17750-201ENSMUST00000182477 529 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Nup88Q8CEC0 Mir7084-201ENSMUST00000183876 70 ntBASIC8.28□□□□□ -1.08
Nup88Q8CEC0 Gm9127-201ENSMUST00000188041 985 ntBASIC8.28□□□□□ -1.08
Nup88Q8CEC0 Gm38373-201ENSMUST00000192042 288 ntBASIC8.28□□□□□ -1.08
Nup88Q8CEC0 Gm42650-201ENSMUST00000197038 575 ntTSL 2 BASIC8.28□□□□□ -1.08
Nup88Q8CEC0 Gm8182-201ENSMUST00000197863 769 ntBASIC8.28□□□□□ -1.08
Nup88Q8CEC0 Ltf-209ENSMUST00000198884 616 ntTSL 5 BASIC8.28□□□□□ -1.08
Nup88Q8CEC0 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Nup88Q8CEC0 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC8.28□□□□□ -1.08
Nup88Q8CEC0 Gm18655-201ENSMUST00000214802 1090 ntBASIC8.28□□□□□ -1.08
Nup88Q8CEC0 AC124778.1-201ENSMUST00000216013 162 ntBASIC8.28□□□□□ -1.08
Nup88Q8CEC0 AC132239.1-201ENSMUST00000223157 773 ntTSL 5 BASIC8.28□□□□□ -1.08
Nup88Q8CEC0 CT030182.4-201ENSMUST00000223647 645 ntBASIC8.28□□□□□ -1.08
Nup88Q8CEC0 Gm21762-202ENSMUST00000225881 830 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Nup88Q8CEC0 Olfr735-201ENSMUST00000049729 1065 ntAPPRIS P2 BASIC8.28□□□□□ -1.08
Nup88Q8CEC0 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Nup88Q8CEC0 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC8.28□□□□□ -1.08
Nup88Q8CEC0 Gm44121-201ENSMUST00000205169 2006 ntBASIC8.28□□□□□ -1.08
Nup88Q8CEC0 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Nup88Q8CEC0 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
Nup88Q8CEC0 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Nup88Q8CEC0 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Nup88Q8CEC0 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Nup88Q8CEC0 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Nup88Q8CEC0 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Nup88Q8CEC0 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Nup88Q8CEC0 Tor1aip2-202ENSMUST00000065648 2529 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Nup88Q8CEC0 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Nup88Q8CEC0 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Nup88Q8CEC0 Gm28379-202ENSMUST00000187676 2896 ntBASIC8.28□□□□□ -1.08
Nup88Q8CEC0 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Nup88Q8CEC0 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.08
Nup88Q8CEC0 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC8.27□□□□□ -1.08
Nup88Q8CEC0 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
Nup88Q8CEC0 Gm26945-201ENSMUST00000183191 2011 ntBASIC8.27□□□□□ -1.09
Nup88Q8CEC0 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC8.27□□□□□ -1.09
Nup88Q8CEC0 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Nup88Q8CEC0 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Nup88Q8CEC0 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Nup88Q8CEC0 Gm44093-201ENSMUST00000204381 1802 ntBASIC8.27□□□□□ -1.09
Nup88Q8CEC0 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Nup88Q8CEC0 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Nup88Q8CEC0 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Nup88Q8CEC0 Gm37138-201ENSMUST00000194564 2089 ntBASIC8.27□□□□□ -1.09
Nup88Q8CEC0 Gm43181-201ENSMUST00000197001 2072 ntBASIC8.27□□□□□ -1.09
Nup88Q8CEC0 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
Nup88Q8CEC0 Ptprg-202ENSMUST00000119888 2787 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Nup88Q8CEC0 Tmem167-203ENSMUST00000161568 8689 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Nup88Q8CEC0 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC8.27□□□□□ -1.09
Nup88Q8CEC0 Olfr1062-201ENSMUST00000105213 956 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Nup88Q8CEC0 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC8.27□□□□□ -1.09
Nup88Q8CEC0 Gm12903-201ENSMUST00000121015 544 ntBASIC8.27□□□□□ -1.09
Nup88Q8CEC0 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Nup88Q8CEC0 Gm14503-201ENSMUST00000130337 1164 ntBASIC8.27□□□□□ -1.09
Nup88Q8CEC0 Gm26025-201ENSMUST00000158655 271 ntBASIC8.27□□□□□ -1.09
Nup88Q8CEC0 Gm24680-201ENSMUST00000158759 126 ntBASIC8.27□□□□□ -1.09
Nup88Q8CEC0 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Nup88Q8CEC0 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Nup88Q8CEC0 Gm17786-201ENSMUST00000182000 427 ntBASIC8.27□□□□□ -1.09
Nup88Q8CEC0 Gm28952-201ENSMUST00000189285 681 ntBASIC8.27□□□□□ -1.09
Nup88Q8CEC0 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Nup88Q8CEC0 Gm7412-201ENSMUST00000191692 605 ntBASIC8.27□□□□□ -1.09
Nup88Q8CEC0 Gm5154-201ENSMUST00000203971 399 ntBASIC8.27□□□□□ -1.09
Nup88Q8CEC0 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC8.27□□□□□ -1.09
Nup88Q8CEC0 Gm45345-201ENSMUST00000211427 555 ntTSL 2 BASIC8.27□□□□□ -1.09
Nup88Q8CEC0 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC8.27□□□□□ -1.09
Nup88Q8CEC0 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC8.27□□□□□ -1.09
Nup88Q8CEC0 AC159205.2-201ENSMUST00000223759 816 ntBASIC8.27□□□□□ -1.09
Nup88Q8CEC0 Olfr159-201ENSMUST00000053931 960 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Nup88Q8CEC0 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC8.27□□□□□ -1.09
Nup88Q8CEC0 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Nup88Q8CEC0 Klf8-202ENSMUST00000112574 4752 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Nup88Q8CEC0 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC8.27□□□□□ -1.09
Nup88Q8CEC0 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Nup88Q8CEC0 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Nup88Q8CEC0 Gm29571-201ENSMUST00000191547 1909 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Nup88Q8CEC0 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Nup88Q8CEC0 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
Nup88Q8CEC0 Gm43189-201ENSMUST00000196040 3069 ntBASIC8.26□□□□□ -1.09
Nup88Q8CEC0 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Nup88Q8CEC0 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Nup88Q8CEC0 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Nup88Q8CEC0 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC8.26□□□□□ -1.09
Nup88Q8CEC0 Gm38200-201ENSMUST00000192083 2111 ntBASIC8.26□□□□□ -1.09
Nup88Q8CEC0 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC8.26□□□□□ -1.09
Nup88Q8CEC0 Gm42648-201ENSMUST00000200774 2505 ntBASIC8.26□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms