Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 4933407I05Rik-201ENSMUST00000213311 482 ntTSL 5 BASIC8.23□□□□□ -1.09
Pcdhb7Q8CDY9 Gm36550-201ENSMUST00000221947 416 ntTSL 3 BASIC8.23□□□□□ -1.09
Pcdhb7Q8CDY9 AC211878.7-201ENSMUST00000222851 661 ntBASIC8.23□□□□□ -1.09
Pcdhb7Q8CDY9 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC8.23□□□□□ -1.09
Pcdhb7Q8CDY9 AC118639.1-204ENSMUST00000226401 694 ntBASIC8.23□□□□□ -1.09
Pcdhb7Q8CDY9 Med6-201ENSMUST00000002756 1003 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdhb7Q8CDY9 Il1f8-201ENSMUST00000028363 1217 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdhb7Q8CDY9 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Pcdhb7Q8CDY9 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Pcdhb7Q8CDY9 Ocm-202ENSMUST00000085704 330 ntAPPRIS P1 TSL 3 BASIC8.23□□□□□ -1.09
Pcdhb7Q8CDY9 Bcl2a1d-201ENSMUST00000098486 863 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdhb7Q8CDY9 Siae-204ENSMUST00000215474 4947 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdhb7Q8CDY9 Cebpz-201ENSMUST00000024885 4074 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdhb7Q8CDY9 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdhb7Q8CDY9 Gm6150-202ENSMUST00000219888 2977 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdhb7Q8CDY9 Strn-201ENSMUST00000024881 2967 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdhb7Q8CDY9 Eps15l1-205ENSMUST00000212590 3376 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdhb7Q8CDY9 Gm37936-201ENSMUST00000194647 1322 ntBASIC8.23□□□□□ -1.09
Pcdhb7Q8CDY9 Gm17300-201ENSMUST00000172202 1527 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdhb7Q8CDY9 Gm17791-201ENSMUST00000185660 1501 ntBASIC8.23□□□□□ -1.09
Pcdhb7Q8CDY9 Bbs9-210ENSMUST00000147712 3495 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdhb7Q8CDY9 Tbc1d24-208ENSMUST00000201089 4081 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdhb7Q8CDY9 Tdrd1-201ENSMUST00000078723 4887 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdhb7Q8CDY9 Gm21719-202ENSMUST00000189073 1358 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 AC154738.6-201ENSMUST00000227225 1352 ntBASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Ube2v1-201ENSMUST00000060645 1586 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Zfp791-201ENSMUST00000098550 1587 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 AC138221.1-201ENSMUST00000216180 4944 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Gm29654-201ENSMUST00000186886 2169 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Gm28226-201ENSMUST00000186916 2169 ntTSL 5 BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Glt8d2-201ENSMUST00000020485 2153 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Slc44a1-202ENSMUST00000107645 2365 ntTSL 5 BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Gm36993-201ENSMUST00000192983 2980 ntBASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Ift81-201ENSMUST00000031426 2950 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Acsm5-201ENSMUST00000066465 2981 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Virma-201ENSMUST00000055372 3954 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Edar-201ENSMUST00000003312 3637 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Cwc22-205ENSMUST00000111824 2603 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Gm45292-201ENSMUST00000211232 2207 ntBASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 4933402N03Rik-201ENSMUST00000070980 1826 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Trim42-201ENSMUST00000035026 2463 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Zfp280d-217ENSMUST00000184517 3919 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Gm13535-201ENSMUST00000118714 1884 ntBASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Havcr1-201ENSMUST00000047568 1892 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Gm25594-201ENSMUST00000102274 82 ntBASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Inca1-204ENSMUST00000108543 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Gm8818-201ENSMUST00000110797 1047 ntBASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Cd59b-203ENSMUST00000111131 555 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 F730035M05Rik-201ENSMUST00000145871 1296 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Tle6-213ENSMUST00000151858 627 ntTSL 3 BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Gm8893-201ENSMUST00000172146 1242 ntBASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 H2-Aa-204ENSMUST00000174751 826 ntTSL 3 BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Gm19402-201ENSMUST00000180297 801 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Gm29460-201ENSMUST00000188607 714 ntBASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Gm37946-201ENSMUST00000192064 347 ntBASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Gm7142-201ENSMUST00000194232 586 ntBASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Gm43218-201ENSMUST00000196275 344 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Gm44449-201ENSMUST00000203610 153 ntBASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Gm44018-201ENSMUST00000204471 407 ntBASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Ceacam1-204ENSMUST00000205308 993 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Olfr65-202ENSMUST00000209528 1106 ntAPPRIS P2 BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 AC124585.1-201ENSMUST00000213334 953 ntTSL 5 BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Spata19-204ENSMUST00000214287 642 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Gm46210-201ENSMUST00000218800 577 ntTSL 3 BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Gm34278-201ENSMUST00000220534 622 ntTSL 5 BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 AC166358.1-201ENSMUST00000220677 105 ntBASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 AC153662.2-201ENSMUST00000221097 120 ntBASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 AC156037.2-201ENSMUST00000221284 112 ntBASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 AC166341.6-201ENSMUST00000221528 105 ntBASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 AC133183.2-201ENSMUST00000221543 280 ntBASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Gm18362-201ENSMUST00000221786 529 ntBASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 CT030242.1-201ENSMUST00000221945 125 ntBASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 AC124772.2-201ENSMUST00000222049 154 ntBASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 AC153663.1-201ENSMUST00000222165 120 ntBASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 CT030157.1-201ENSMUST00000222355 148 ntBASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 AC150661.2-201ENSMUST00000222418 105 ntBASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 AC127242.2-201ENSMUST00000223138 148 ntBASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 AC154506.3-201ENSMUST00000225417 213 ntBASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Tssk4-203ENSMUST00000226497 1235 ntBASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Gm5113-201ENSMUST00000085668 2955 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Gm10221-201ENSMUST00000088299 309 ntBASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Siah3-201ENSMUST00000164848 4472 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdhb7Q8CDY9 Specc1-203ENSMUST00000108709 6843 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms