Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Lrif1Q8CDD9 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Lrif1Q8CDD9 Gm45001-201ENSMUST00000208279 2515 ntBASIC6.92□□□□□ -1.3
Lrif1Q8CDD9 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Lrif1Q8CDD9 CT030170.4-203ENSMUST00000221062 1403 ntTSL 5 BASIC6.92□□□□□ -1.3
Lrif1Q8CDD9 Spp1-201ENSMUST00000031243 1410 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
Lrif1Q8CDD9 Gm8700-201ENSMUST00000222187 3054 ntBASIC6.92□□□□□ -1.3
Lrif1Q8CDD9 4833407H14Rik-201ENSMUST00000180442 1485 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Lrif1Q8CDD9 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Lrif1Q8CDD9 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC6.91□□□□□ -1.3
Lrif1Q8CDD9 Rnf24-204ENSMUST00000165420 5833 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
Lrif1Q8CDD9 Hipk3-203ENSMUST00000111125 3651 ntTSL 5 BASIC6.91□□□□□ -1.3
Lrif1Q8CDD9 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Lrif1Q8CDD9 Gm29617-206ENSMUST00000187759 1600 ntTSL 5 BASIC6.91□□□□□ -1.3
Lrif1Q8CDD9 Gm28749-205ENSMUST00000187886 1600 ntTSL 3 BASIC6.91□□□□□ -1.3
Lrif1Q8CDD9 Gm29000-208ENSMUST00000190932 1600 ntTSL 3 BASIC6.91□□□□□ -1.3
Lrif1Q8CDD9 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Lrif1Q8CDD9 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Lrif1Q8CDD9 Gm25546-201ENSMUST00000103977 132 ntBASIC6.91□□□□□ -1.3
Lrif1Q8CDD9 Gm22470-201ENSMUST00000104117 130 ntBASIC6.91□□□□□ -1.3
Lrif1Q8CDD9 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Lrif1Q8CDD9 Gm8812-201ENSMUST00000118496 412 ntBASIC6.91□□□□□ -1.3
Lrif1Q8CDD9 Gm12601-201ENSMUST00000118994 846 ntBASIC6.91□□□□□ -1.3
Lrif1Q8CDD9 Gm13545-201ENSMUST00000119044 482 ntBASIC6.91□□□□□ -1.3
Lrif1Q8CDD9 Gm15481-201ENSMUST00000120264 539 ntBASIC6.91□□□□□ -1.3
Lrif1Q8CDD9 Gm22915-201ENSMUST00000157615 136 ntBASIC6.91□□□□□ -1.3
Lrif1Q8CDD9 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Lrif1Q8CDD9 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Lrif1Q8CDD9 Gm5272-201ENSMUST00000182730 982 ntBASIC6.91□□□□□ -1.3
Lrif1Q8CDD9 Mir7058-201ENSMUST00000184637 75 ntBASIC6.91□□□□□ -1.3
Lrif1Q8CDD9 A930005N03Rik-201ENSMUST00000194920 1247 ntBASIC6.91□□□□□ -1.3
Lrif1Q8CDD9 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC6.91□□□□□ -1.3
Lrif1Q8CDD9 Gm31663-202ENSMUST00000208481 1190 ntBASIC6.91□□□□□ -1.3
Lrif1Q8CDD9 Gm35024-201ENSMUST00000213359 972 ntTSL 5 BASIC6.91□□□□□ -1.3
Lrif1Q8CDD9 AC163354.2-201ENSMUST00000221741 649 ntTSL 3 BASIC6.91□□□□□ -1.3
Lrif1Q8CDD9 AC130219.2-201ENSMUST00000228765 807 ntBASIC6.91□□□□□ -1.3
Lrif1Q8CDD9 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
Lrif1Q8CDD9 Cd40-203ENSMUST00000081310 668 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Lrif1Q8CDD9 Slxl1-201ENSMUST00000088740 730 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Lrif1Q8CDD9 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Lrif1Q8CDD9 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Lrif1Q8CDD9 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC6.91□□□□□ -1.3
Lrif1Q8CDD9 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Lrif1Q8CDD9 Olfr101-202ENSMUST00000214376 2989 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Lrif1Q8CDD9 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC6.91□□□□□ -1.3
Lrif1Q8CDD9 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Lrif1Q8CDD9 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC6.91□□□□□ -1.3
Lrif1Q8CDD9 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Lrif1Q8CDD9 Gm7265-201ENSMUST00000192735 3502 ntBASIC6.9□□□□□ -1.3
Lrif1Q8CDD9 Speer4e-201ENSMUST00000159973 1603 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Lrif1Q8CDD9 Gm38381-201ENSMUST00000193594 2275 ntBASIC6.9□□□□□ -1.3
Lrif1Q8CDD9 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Lrif1Q8CDD9 Gm42874-201ENSMUST00000198888 1774 ntBASIC6.9□□□□□ -1.3
Lrif1Q8CDD9 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC6.9□□□□□ -1.3
Lrif1Q8CDD9 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Lrif1Q8CDD9 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC6.9□□□□□ -1.3
Lrif1Q8CDD9 Mir503-201ENSMUST00000102168 71 ntBASIC6.9□□□□□ -1.3
Lrif1Q8CDD9 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Lrif1Q8CDD9 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC6.9□□□□□ -1.3
Lrif1Q8CDD9 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Lrif1Q8CDD9 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.3
Lrif1Q8CDD9 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Lrif1Q8CDD9 Gm26959-201ENSMUST00000182376 978 ntBASIC6.9□□□□□ -1.3
Lrif1Q8CDD9 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Lrif1Q8CDD9 Gm34583-203ENSMUST00000202586 454 ntBASIC6.9□□□□□ -1.3
Lrif1Q8CDD9 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Lrif1Q8CDD9 Gm44692-201ENSMUST00000207441 901 ntTSL 3 BASIC6.9□□□□□ -1.3
Lrif1Q8CDD9 Gm44566-201ENSMUST00000207638 304 ntBASIC6.9□□□□□ -1.3
Lrif1Q8CDD9 AC121793.1-201ENSMUST00000214211 633 ntTSL 5 BASIC6.9□□□□□ -1.3
Lrif1Q8CDD9 Gm5791-201ENSMUST00000220840 489 ntBASIC6.9□□□□□ -1.3
Lrif1Q8CDD9 AC116502.1-201ENSMUST00000220989 291 ntBASIC6.9□□□□□ -1.3
Lrif1Q8CDD9 CT009718.2-202ENSMUST00000222092 704 ntTSL 2 BASIC6.9□□□□□ -1.3
Lrif1Q8CDD9 Mylf-ps-201ENSMUST00000222174 421 ntBASIC6.9□□□□□ -1.3
Lrif1Q8CDD9 AC159205.2-201ENSMUST00000223759 816 ntBASIC6.9□□□□□ -1.3
Lrif1Q8CDD9 4933413J09Rik-201ENSMUST00000022427 899 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Lrif1Q8CDD9 AC158981.1-201ENSMUST00000226943 1205 ntBASIC6.9□□□□□ -1.3
Lrif1Q8CDD9 Ly6g-201ENSMUST00000023246 336 ntTSL 5 BASIC6.9□□□□□ -1.3
Lrif1Q8CDD9 Il1f6-201ENSMUST00000028361 883 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Lrif1Q8CDD9 Gm2840-201ENSMUST00000048361 411 ntBASIC6.9□□□□□ -1.3
Lrif1Q8CDD9 Rhox11-201ENSMUST00000054147 811 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Lrif1Q8CDD9 Ly6c1-201ENSMUST00000065408 844 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
Lrif1Q8CDD9 Hba-a2-201ENSMUST00000093207 554 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Lrif1Q8CDD9 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC6.9□□□□□ -1.3
Lrif1Q8CDD9 5330413P13Rik-203ENSMUST00000150466 2173 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Lrif1Q8CDD9 Kcne3-203ENSMUST00000178946 1323 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Lrif1Q8CDD9 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Lrif1Q8CDD9 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Lrif1Q8CDD9 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC6.9□□□□□ -1.31
Lrif1Q8CDD9 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Lrif1Q8CDD9 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.31
Lrif1Q8CDD9 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC6.9□□□□□ -1.31
Lrif1Q8CDD9 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
Lrif1Q8CDD9 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Lrif1Q8CDD9 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
Lrif1Q8CDD9 Gm37067-201ENSMUST00000195730 1628 ntBASIC6.9□□□□□ -1.31
Lrif1Q8CDD9 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Lrif1Q8CDD9 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Lrif1Q8CDD9 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Lrif1Q8CDD9 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.31
Lrif1Q8CDD9 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms