Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Trbv1-201ENSMUST00000103262 417 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Atg4aQ8C9S8 Gm25311-201ENSMUST00000104136 132 ntBASIC8.41□□□□□ -1.06
Atg4aQ8C9S8 Gm12468-201ENSMUST00000116189 404 ntBASIC8.41□□□□□ -1.06
Atg4aQ8C9S8 Gm14070-201ENSMUST00000120773 428 ntBASIC8.41□□□□□ -1.06
Atg4aQ8C9S8 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Atg4aQ8C9S8 Gm22552-201ENSMUST00000157796 337 ntBASIC8.41□□□□□ -1.06
Atg4aQ8C9S8 Gm16138-201ENSMUST00000159341 821 ntBASIC8.41□□□□□ -1.06
Atg4aQ8C9S8 Gm20491-201ENSMUST00000173765 1241 ntBASIC8.41□□□□□ -1.06
Atg4aQ8C9S8 1700066J03Rik-201ENSMUST00000181908 444 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Atg4aQ8C9S8 Gm3841-201ENSMUST00000191399 451 ntBASIC8.41□□□□□ -1.06
Atg4aQ8C9S8 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC8.41□□□□□ -1.06
Atg4aQ8C9S8 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Atg4aQ8C9S8 Gm45282-201ENSMUST00000209439 681 ntTSL 3 BASIC8.41□□□□□ -1.06
Atg4aQ8C9S8 Gm8168-201ENSMUST00000209631 948 ntBASIC8.41□□□□□ -1.06
Atg4aQ8C9S8 Gm6145-202ENSMUST00000210292 787 ntTSL 5 BASIC8.41□□□□□ -1.06
Atg4aQ8C9S8 AC106830.2-201ENSMUST00000226624 943 ntBASIC8.41□□□□□ -1.06
Atg4aQ8C9S8 CT030238.3-201ENSMUST00000227352 875 ntBASIC8.41□□□□□ -1.06
Atg4aQ8C9S8 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC8.41□□□□□ -1.06
Atg4aQ8C9S8 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Atg4aQ8C9S8 Zfp27-201ENSMUST00000053521 3150 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Atg4aQ8C9S8 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Atg4aQ8C9S8 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Atg4aQ8C9S8 Adgrb3-201ENSMUST00000041838 5059 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Atg4aQ8C9S8 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Atg4aQ8C9S8 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Atg4aQ8C9S8 AC138765.2-202ENSMUST00000228418 3435 ntBASIC8.41□□□□□ -1.06
Atg4aQ8C9S8 Meiob-201ENSMUST00000024972 1703 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Atg4aQ8C9S8 Ttk-202ENSMUST00000185913 2731 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Atg4aQ8C9S8 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Atg4aQ8C9S8 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Atg4aQ8C9S8 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Atg4aQ8C9S8 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Atg4aQ8C9S8 Sec24c-202ENSMUST00000223751 4196 ntBASIC8.4□□□□□ -1.06
Atg4aQ8C9S8 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Atg4aQ8C9S8 AC153955.2-201ENSMUST00000216739 4129 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Atg4aQ8C9S8 Fetub-202ENSMUST00000116625 1338 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Atg4aQ8C9S8 Kcnk10-202ENSMUST00000221240 7460 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Atg4aQ8C9S8 Gm11864-201ENSMUST00000116179 1220 ntBASIC8.4□□□□□ -1.06
Atg4aQ8C9S8 Gm14503-201ENSMUST00000130337 1164 ntBASIC8.4□□□□□ -1.06
Atg4aQ8C9S8 E130111B04Rik-201ENSMUST00000156781 450 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Atg4aQ8C9S8 Gm26025-201ENSMUST00000158655 271 ntBASIC8.4□□□□□ -1.06
Atg4aQ8C9S8 Mir6769b-201ENSMUST00000184793 60 ntBASIC8.4□□□□□ -1.06
Atg4aQ8C9S8 Gm21292-202ENSMUST00000190329 1225 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Atg4aQ8C9S8 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC8.4□□□□□ -1.06
Atg4aQ8C9S8 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC8.4□□□□□ -1.06
Atg4aQ8C9S8 Gm29154-205ENSMUST00000213325 1112 ntTSL 5 BASIC8.4□□□□□ -1.06
Atg4aQ8C9S8 Gm18226-201ENSMUST00000215261 521 ntBASIC8.4□□□□□ -1.06
Atg4aQ8C9S8 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC8.4□□□□□ -1.06
Atg4aQ8C9S8 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC8.4□□□□□ -1.06
Atg4aQ8C9S8 AC155270.1-202ENSMUST00000221503 352 ntBASIC8.4□□□□□ -1.06
Atg4aQ8C9S8 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Atg4aQ8C9S8 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Atg4aQ8C9S8 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC8.4□□□□□ -1.06
Atg4aQ8C9S8 Mir138-2-201ENSMUST00000083578 71 ntBASIC8.4□□□□□ -1.06
Atg4aQ8C9S8 Gm43421-201ENSMUST00000200044 2905 ntBASIC8.4□□□□□ -1.06
Atg4aQ8C9S8 Fam126b-202ENSMUST00000097724 4581 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Atg4aQ8C9S8 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Atg4aQ8C9S8 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC8.4□□□□□ -1.07
Atg4aQ8C9S8 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC8.4□□□□□ -1.07
Atg4aQ8C9S8 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.07
Atg4aQ8C9S8 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Atg4aQ8C9S8 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Atg4aQ8C9S8 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.07
Atg4aQ8C9S8 Gm43557-201ENSMUST00000197100 2370 ntBASIC8.4□□□□□ -1.07
Atg4aQ8C9S8 Ryr2-202ENSMUST00000170156 16813 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.07
Atg4aQ8C9S8 Ryr2-201ENSMUST00000021750 16814 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.07
Atg4aQ8C9S8 Nlrc5-201ENSMUST00000053085 6945 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Atg4aQ8C9S8 Mxi1-203ENSMUST00000111737 4843 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Atg4aQ8C9S8 Gm37169-201ENSMUST00000195599 4161 ntBASIC8.4□□□□□ -1.07
Atg4aQ8C9S8 Gm43029-201ENSMUST00000201829 1535 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm15930-201ENSMUST00000156603 2037 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm7690-201ENSMUST00000190885 1399 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 AC154482.1-201ENSMUST00000223248 2483 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm11245-201ENSMUST00000119419 1037 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm15123-201ENSMUST00000138988 339 ntTSL 3 BASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm24176-201ENSMUST00000158928 121 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm27360-201ENSMUST00000183487 80 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Mir8120-201ENSMUST00000185035 139 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm29048-201ENSMUST00000185342 615 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm29403-201ENSMUST00000185491 615 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm28234-201ENSMUST00000185657 615 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm28248-201ENSMUST00000186093 615 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm29633-202ENSMUST00000186217 615 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm28829-201ENSMUST00000186231 615 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm28261-201ENSMUST00000186417 615 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm28815-201ENSMUST00000186751 615 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm28608-201ENSMUST00000186860 615 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm28122-201ENSMUST00000187088 615 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm28420-201ENSMUST00000187340 615 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm28106-201ENSMUST00000187640 615 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm28698-201ENSMUST00000187734 615 ntBASIC8.39□□□□□ -1.07
Atg4aQ8C9S8 Gm29224-201ENSMUST00000187965 615 ntBASIC8.39□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms