Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm14677-201ENSMUST00000117866 486 ntBASIC8.79□□□□□ -1
Trim47Q8C0E3 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC8.79□□□□□ -1
Trim47Q8C0E3 Gm12067-201ENSMUST00000119755 1148 ntBASIC8.79□□□□□ -1
Trim47Q8C0E3 Gm4914-201ENSMUST00000119757 459 ntBASIC8.79□□□□□ -1
Trim47Q8C0E3 Gm15730-201ENSMUST00000121828 415 ntBASIC8.79□□□□□ -1
Trim47Q8C0E3 Gm8080-201ENSMUST00000122046 1155 ntBASIC8.79□□□□□ -1
Trim47Q8C0E3 Gm13649-201ENSMUST00000122325 606 ntBASIC8.79□□□□□ -1
Trim47Q8C0E3 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC8.79□□□□□ -1
Trim47Q8C0E3 Fbxl12-210ENSMUST00000155301 476 ntTSL 3 BASIC8.79□□□□□ -1
Trim47Q8C0E3 Paip1-206ENSMUST00000173627 1233 ntTSL 5 BASIC8.79□□□□□ -1
Trim47Q8C0E3 Gm20432-201ENSMUST00000173716 250 ntBASIC8.79□□□□□ -1
Trim47Q8C0E3 Gm8167-201ENSMUST00000183320 958 ntBASIC8.79□□□□□ -1
Trim47Q8C0E3 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC8.79□□□□□ -1
Trim47Q8C0E3 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC8.79□□□□□ -1
Trim47Q8C0E3 Gm28864-201ENSMUST00000189251 644 ntBASIC8.79□□□□□ -1
Trim47Q8C0E3 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trim47Q8C0E3 Gm18775-201ENSMUST00000190763 586 ntBASIC8.79□□□□□ -1
Trim47Q8C0E3 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC8.79□□□□□ -1
Trim47Q8C0E3 Mir1897-202ENSMUST00000198006 79 ntBASIC8.79□□□□□ -1
Trim47Q8C0E3 Gm42808-201ENSMUST00000198212 285 ntTSL 5 BASIC8.79□□□□□ -1
Trim47Q8C0E3 Gm42760-201ENSMUST00000199814 311 ntBASIC8.79□□□□□ -1
Trim47Q8C0E3 Gm17995-201ENSMUST00000209266 530 ntBASIC8.79□□□□□ -1
Trim47Q8C0E3 Gm7419-201ENSMUST00000209962 925 ntBASIC8.79□□□□□ -1
Trim47Q8C0E3 Gm45388-202ENSMUST00000211101 815 ntTSL 5 BASIC8.79□□□□□ -1
Trim47Q8C0E3 Gm4977-201ENSMUST00000215709 1262 ntBASIC8.79□□□□□ -1
Trim47Q8C0E3 AC112274.2-201ENSMUST00000218436 170 ntBASIC8.79□□□□□ -1
Trim47Q8C0E3 Gm4898-201ENSMUST00000218519 832 ntBASIC8.79□□□□□ -1
Trim47Q8C0E3 Gm35035-201ENSMUST00000218838 628 ntTSL 3 BASIC8.79□□□□□ -1
Trim47Q8C0E3 Gm18510-201ENSMUST00000219335 1096 ntBASIC8.79□□□□□ -1
Trim47Q8C0E3 Gm40538-201ENSMUST00000220610 578 ntTSL 5 BASIC8.79□□□□□ -1
Trim47Q8C0E3 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC8.79□□□□□ -1
Trim47Q8C0E3 4933409F18Rik-201ENSMUST00000221910 1267 ntTSL 5 BASIC8.79□□□□□ -1
Trim47Q8C0E3 AC174082.2-201ENSMUST00000222094 543 ntBASIC8.79□□□□□ -1
Trim47Q8C0E3 CT030170.6-202ENSMUST00000223186 544 ntBASIC8.79□□□□□ -1
Trim47Q8C0E3 Cst11-201ENSMUST00000028934 615 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trim47Q8C0E3 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC8.79□□□□□ -1
Trim47Q8C0E3 Olfr530-201ENSMUST00000074177 1080 ntAPPRIS P1 BASIC8.79□□□□□ -1
Trim47Q8C0E3 Tcl1b2-201ENSMUST00000081379 1009 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trim47Q8C0E3 Tmem265-201ENSMUST00000084563 1054 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trim47Q8C0E3 Olfr958-202ENSMUST00000215505 3514 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Trim47Q8C0E3 Musk-203ENSMUST00000098057 3422 ntTSL 1 (best) BASIC8.79□□□□□ -1
Trim47Q8C0E3 Mre11a-202ENSMUST00000115632 5660 ntTSL 1 (best) BASIC8.79□□□□□ -1
Trim47Q8C0E3 Mkl2-201ENSMUST00000009713 5815 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Trim47Q8C0E3 Adam18-201ENSMUST00000033957 2361 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trim47Q8C0E3 BC106179-201ENSMUST00000055369 4128 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trim47Q8C0E3 Cd247-208ENSMUST00000178336 2807 ntTSL 5 BASIC8.79□□□□□ -1
Trim47Q8C0E3 Fnbp1-207ENSMUST00000113559 4378 ntTSL 1 (best) BASIC8.79□□□□□ -1
Trim47Q8C0E3 Wdhd1-204ENSMUST00000187531 4260 ntAPPRIS P5 TSL 5 BASIC8.79□□□□□ -1
Trim47Q8C0E3 Gm10419-204ENSMUST00000198585 4059 ntTSL 2 BASIC8.79□□□□□ -1
Trim47Q8C0E3 Slc43a2-201ENSMUST00000042561 6891 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trim47Q8C0E3 Mas1-206ENSMUST00000162333 1750 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trim47Q8C0E3 AC125020.1-201ENSMUST00000220137 2225 ntTSL 1 (best) BASIC8.78□□□□□ -1
Trim47Q8C0E3 Psma8-201ENSMUST00000040860 1693 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trim47Q8C0E3 Bcorl1-201ENSMUST00000037596 7360 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Trim47Q8C0E3 Sbno1-216ENSMUST00000199808 10161 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trim47Q8C0E3 Ugt2a3-201ENSMUST00000031195 2117 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trim47Q8C0E3 Gm5182-201ENSMUST00000217708 6092 ntBASIC8.78□□□□□ -1
Trim47Q8C0E3 Gm11412-201ENSMUST00000144875 2800 ntTSL 1 (best) BASIC8.78□□□□□ -1
Trim47Q8C0E3 Gm37980-201ENSMUST00000194420 1910 ntBASIC8.78□□□□□ -1
Trim47Q8C0E3 Tnfrsf23-202ENSMUST00000152703 1476 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trim47Q8C0E3 Gm38189-201ENSMUST00000194495 1457 ntBASIC8.78□□□□□ -1
Trim47Q8C0E3 Zfp963-201ENSMUST00000130458 2291 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trim47Q8C0E3 Gm35172-201ENSMUST00000196037 2649 ntBASIC8.78□□□□□ -1
Trim47Q8C0E3 Fam160a2-208ENSMUST00000179474 10853 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Trim47Q8C0E3 Olfr619-202ENSMUST00000215732 1370 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Trim47Q8C0E3 Ankef1-202ENSMUST00000121717 2875 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trim47Q8C0E3 Gm6913-201ENSMUST00000100019 348 ntBASIC8.78□□□□□ -1
Trim47Q8C0E3 Gstm7-203ENSMUST00000106688 783 ntTSL 2 BASIC8.78□□□□□ -1
Trim47Q8C0E3 Tsacc-201ENSMUST00000010682 481 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trim47Q8C0E3 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC8.78□□□□□ -1
Trim47Q8C0E3 Smco3-202ENSMUST00000111894 1069 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trim47Q8C0E3 Gm14466-201ENSMUST00000119028 451 ntBASIC8.78□□□□□ -1
Trim47Q8C0E3 Gm4918-201ENSMUST00000119420 1084 ntBASIC8.78□□□□□ -1
Trim47Q8C0E3 Gm15049-201ENSMUST00000120474 463 ntBASIC8.78□□□□□ -1
Trim47Q8C0E3 Gm12967-201ENSMUST00000122147 289 ntBASIC8.78□□□□□ -1
Trim47Q8C0E3 Gm25052-201ENSMUST00000122661 158 ntBASIC8.78□□□□□ -1
Trim47Q8C0E3 Tsc22d1-205ENSMUST00000133224 786 ntTSL 2 BASIC8.78□□□□□ -1
Trim47Q8C0E3 1700125H03Rik-202ENSMUST00000139265 637 ntTSL 1 (best) BASIC8.78□□□□□ -1
Trim47Q8C0E3 Gm15389-201ENSMUST00000153774 666 ntTSL 3 BASIC8.78□□□□□ -1
Trim47Q8C0E3 Mir1962-201ENSMUST00000157516 121 ntBASIC8.78□□□□□ -1
Trim47Q8C0E3 Gm22670-201ENSMUST00000158724 143 ntBASIC8.78□□□□□ -1
Trim47Q8C0E3 Ggact-204ENSMUST00000161322 524 ntTSL 2 BASIC8.78□□□□□ -1
Trim47Q8C0E3 Gm16573-203ENSMUST00000162231 807 ntTSL 2 BASIC8.78□□□□□ -1
Trim47Q8C0E3 Gm5973-201ENSMUST00000178542 496 ntBASIC8.78□□□□□ -1
Trim47Q8C0E3 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC8.78□□□□□ -1
Trim47Q8C0E3 4930526L06Rik-201ENSMUST00000181137 1022 ntTSL 1 (best) BASIC8.78□□□□□ -1
Trim47Q8C0E3 D430018E03Rik-201ENSMUST00000181842 3832 ntTSL 1 (best) BASIC8.78□□□□□ -1
Trim47Q8C0E3 1700021A07Rik-202ENSMUST00000187763 485 ntTSL 1 (best) BASIC8.78□□□□□ -1
Trim47Q8C0E3 Gm9451-201ENSMUST00000188491 604 ntBASIC8.78□□□□□ -1
Trim47Q8C0E3 Gm37383-201ENSMUST00000191750 745 ntBASIC8.78□□□□□ -1
Trim47Q8C0E3 Gm40319-201ENSMUST00000199785 481 ntBASIC8.78□□□□□ -1
Trim47Q8C0E3 Gm44727-201ENSMUST00000204225 451 ntBASIC8.78□□□□□ -1
Trim47Q8C0E3 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC8.78□□□□□ -1
Trim47Q8C0E3 Gm40418-201ENSMUST00000218806 1013 ntTSL 5 BASIC8.78□□□□□ -1
Trim47Q8C0E3 CT030166.1-201ENSMUST00000222654 357 ntBASIC8.78□□□□□ -1
Trim47Q8C0E3 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC8.78□□□□□ -1
Trim47Q8C0E3 AC125019.1-201ENSMUST00000224809 908 ntBASIC8.78□□□□□ -1
Trim47Q8C0E3 AC124103.1-201ENSMUST00000227564 1027 ntBASIC8.78□□□□□ -1
Trim47Q8C0E3 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trim47Q8C0E3 Fgf21-201ENSMUST00000033099 951 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms