Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Usp47Q8BY87 Gm13732-201ENSMUST00000117753 535 ntBASIC9.86□□□□□ -0.83
Usp47Q8BY87 Gm14745-201ENSMUST00000118480 1096 ntBASIC9.86□□□□□ -0.83
Usp47Q8BY87 Gm14489-201ENSMUST00000120868 901 ntBASIC9.86□□□□□ -0.83
Usp47Q8BY87 Olfr1017-ps1-201ENSMUST00000121263 664 ntBASIC9.86□□□□□ -0.83
Usp47Q8BY87 Gm14847-201ENSMUST00000121978 519 ntBASIC9.86□□□□□ -0.83
Usp47Q8BY87 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC9.86□□□□□ -0.83
Usp47Q8BY87 Gm26357-201ENSMUST00000158218 115 ntBASIC9.86□□□□□ -0.83
Usp47Q8BY87 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC9.86□□□□□ -0.83
Usp47Q8BY87 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC9.86□□□□□ -0.83
Usp47Q8BY87 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC9.86□□□□□ -0.83
Usp47Q8BY87 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Usp47Q8BY87 Gm42752-201ENSMUST00000198394 1106 ntBASIC9.86□□□□□ -0.83
Usp47Q8BY87 Gm44411-201ENSMUST00000204172 349 ntBASIC9.86□□□□□ -0.83
Usp47Q8BY87 Gm8168-201ENSMUST00000209631 948 ntBASIC9.86□□□□□ -0.83
Usp47Q8BY87 AC154618.2-201ENSMUST00000228299 452 ntBASIC9.86□□□□□ -0.83
Usp47Q8BY87 AW822073-201ENSMUST00000075305 555 ntBASIC9.86□□□□□ -0.83
Usp47Q8BY87 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC9.86□□□□□ -0.83
Usp47Q8BY87 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Usp47Q8BY87 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
Usp47Q8BY87 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC9.86□□□□□ -0.83
Usp47Q8BY87 Gm43335-201ENSMUST00000198299 3276 ntBASIC9.86□□□□□ -0.83
Usp47Q8BY87 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Usp47Q8BY87 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Usp47Q8BY87 Gm42568-201ENSMUST00000195639 1841 ntBASIC9.85□□□□□ -0.83
Usp47Q8BY87 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC9.85□□□□□ -0.83
Usp47Q8BY87 Tnik-203ENSMUST00000159680 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Usp47Q8BY87 Gm36380-201ENSMUST00000210339 4379 ntTSL 5 BASIC9.85□□□□□ -0.83
Usp47Q8BY87 Kcnj15-203ENSMUST00000113855 5128 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Usp47Q8BY87 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Usp47Q8BY87 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC9.85□□□□□ -0.83
Usp47Q8BY87 Dcaf1-201ENSMUST00000055009 4967 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Usp47Q8BY87 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Usp47Q8BY87 Gm36527-201ENSMUST00000195500 3029 ntBASIC9.85□□□□□ -0.83
Usp47Q8BY87 AC124680.1-201ENSMUST00000223923 1585 ntBASIC9.85□□□□□ -0.83
Usp47Q8BY87 Trpm3-206ENSMUST00000099569 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Usp47Q8BY87 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Usp47Q8BY87 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Usp47Q8BY87 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Usp47Q8BY87 Gm9144-201ENSMUST00000101625 1008 ntBASIC9.85□□□□□ -0.83
Usp47Q8BY87 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Usp47Q8BY87 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC9.85□□□□□ -0.83
Usp47Q8BY87 Gm13754-201ENSMUST00000120486 998 ntBASIC9.85□□□□□ -0.83
Usp47Q8BY87 Gm4886-201ENSMUST00000121874 1176 ntBASIC9.85□□□□□ -0.83
Usp47Q8BY87 Mir1900-201ENSMUST00000122714 78 ntBASIC9.85□□□□□ -0.83
Usp47Q8BY87 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Usp47Q8BY87 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC9.85□□□□□ -0.83
Usp47Q8BY87 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC9.85□□□□□ -0.83
Usp47Q8BY87 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Usp47Q8BY87 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC9.85□□□□□ -0.83
Usp47Q8BY87 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC9.85□□□□□ -0.83
Usp47Q8BY87 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Usp47Q8BY87 Cyp2c53-ps-201ENSMUST00000175649 897 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Usp47Q8BY87 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC9.85□□□□□ -0.83
Usp47Q8BY87 Gm8609-201ENSMUST00000182967 998 ntBASIC9.85□□□□□ -0.83
Usp47Q8BY87 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Usp47Q8BY87 Gm37689-201ENSMUST00000193139 275 ntBASIC9.85□□□□□ -0.83
Usp47Q8BY87 Gm36965-201ENSMUST00000193797 394 ntBASIC9.85□□□□□ -0.83
Usp47Q8BY87 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Usp47Q8BY87 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Usp47Q8BY87 Gm43063-201ENSMUST00000198198 1081 ntBASIC9.85□□□□□ -0.83
Usp47Q8BY87 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC9.85□□□□□ -0.83
Usp47Q8BY87 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Usp47Q8BY87 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Usp47Q8BY87 Gm2754-201ENSMUST00000223383 589 ntBASIC9.85□□□□□ -0.83
Usp47Q8BY87 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC9.85□□□□□ -0.83
Usp47Q8BY87 Ccser1-201ENSMUST00000045522 2688 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Usp47Q8BY87 Olfr1320-203ENSMUST00000214375 1831 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Usp47Q8BY87 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Usp47Q8BY87 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC9.85□□□□□ -0.83
Usp47Q8BY87 Gmeb1-203ENSMUST00000105965 4632 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Usp47Q8BY87 Kdm5d-207ENSMUST00000189069 2177 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Usp47Q8BY87 Gm10693-201ENSMUST00000144146 2037 ntBASIC9.84□□□□□ -0.83
Usp47Q8BY87 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Usp47Q8BY87 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Usp47Q8BY87 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Usp47Q8BY87 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Usp47Q8BY87 4930511E03Rik-201ENSMUST00000203778 2232 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Usp47Q8BY87 Gm42490-201ENSMUST00000198595 2064 ntBASIC9.84□□□□□ -0.83
Usp47Q8BY87 Snord88a-201ENSMUST00000116723 90 ntBASIC9.84□□□□□ -0.83
Usp47Q8BY87 Gm6987-201ENSMUST00000119319 428 ntBASIC9.84□□□□□ -0.83
Usp47Q8BY87 Gm12175-201ENSMUST00000122081 345 ntBASIC9.84□□□□□ -0.83
Usp47Q8BY87 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC9.84□□□□□ -0.83
Usp47Q8BY87 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC9.84□□□□□ -0.83
Usp47Q8BY87 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Usp47Q8BY87 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC9.84□□□□□ -0.83
Usp47Q8BY87 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC9.84□□□□□ -0.83
Usp47Q8BY87 Gm43033-201ENSMUST00000199682 425 ntBASIC9.84□□□□□ -0.83
Usp47Q8BY87 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC9.84□□□□□ -0.83
Usp47Q8BY87 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC9.84□□□□□ -0.83
Usp47Q8BY87 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC9.84□□□□□ -0.83
Usp47Q8BY87 AC123917.1-201ENSMUST00000228063 1048 ntBASIC9.84□□□□□ -0.83
Usp47Q8BY87 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Usp47Q8BY87 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Usp47Q8BY87 Kif24-201ENSMUST00000030148 4333 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Usp47Q8BY87 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Usp47Q8BY87 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Usp47Q8BY87 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Usp47Q8BY87 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC9.84□□□□□ -0.83
Usp47Q8BY87 Adgrl3-205ENSMUST00000117985 4974 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms