Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC7.41□□□□□ -1.22
Ccdc40Q8BI79 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC7.41□□□□□ -1.22
Ccdc40Q8BI79 AC154487.1-201ENSMUST00000224649 226 ntBASIC7.41□□□□□ -1.22
Ccdc40Q8BI79 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ccdc40Q8BI79 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Ccdc40Q8BI79 Gm28819-202ENSMUST00000187416 1335 ntTSL 5 BASIC7.41□□□□□ -1.22
Ccdc40Q8BI79 Zranb1-205ENSMUST00000215716 2205 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Ccdc40Q8BI79 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Ccdc40Q8BI79 Ermap-206ENSMUST00000138395 4551 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ccdc40Q8BI79 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC7.41□□□□□ -1.22
Ccdc40Q8BI79 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ccdc40Q8BI79 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC7.41□□□□□ -1.22
Ccdc40Q8BI79 Aadat-202ENSMUST00000209338 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ccdc40Q8BI79 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ccdc40Q8BI79 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC7.41□□□□□ -1.22
Ccdc40Q8BI79 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ccdc40Q8BI79 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ccdc40Q8BI79 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Ccdc40Q8BI79 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Ccdc40Q8BI79 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Ccdc40Q8BI79 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Ccdc40Q8BI79 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Ccdc40Q8BI79 Mcm4-201ENSMUST00000023353 3589 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Ccdc40Q8BI79 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
Ccdc40Q8BI79 Hipk3-203ENSMUST00000111125 3651 ntTSL 5 BASIC7.4□□□□□ -1.22
Ccdc40Q8BI79 n-R5s9-201ENSMUST00000104432 117 ntBASIC7.4□□□□□ -1.22
Ccdc40Q8BI79 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Ccdc40Q8BI79 Gm14248-201ENSMUST00000117790 544 ntBASIC7.4□□□□□ -1.22
Ccdc40Q8BI79 Gm14480-201ENSMUST00000118521 433 ntBASIC7.4□□□□□ -1.22
Ccdc40Q8BI79 Gm11383-201ENSMUST00000121346 807 ntBASIC7.4□□□□□ -1.22
Ccdc40Q8BI79 Tvp23bos-201ENSMUST00000148598 1011 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Ccdc40Q8BI79 Gm12484-201ENSMUST00000156311 581 ntTSL 5 BASIC7.4□□□□□ -1.22
Ccdc40Q8BI79 Gm22948-201ENSMUST00000158561 243 ntBASIC7.4□□□□□ -1.22
Ccdc40Q8BI79 Scgb1b28-ps-201ENSMUST00000163647 290 ntBASIC7.4□□□□□ -1.22
Ccdc40Q8BI79 Esd-203ENSMUST00000175887 809 ntTSL 5 BASIC7.4□□□□□ -1.22
Ccdc40Q8BI79 Gm7481-201ENSMUST00000182020 995 ntBASIC7.4□□□□□ -1.22
Ccdc40Q8BI79 Gm5272-201ENSMUST00000182730 982 ntBASIC7.4□□□□□ -1.22
Ccdc40Q8BI79 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC7.4□□□□□ -1.22
Ccdc40Q8BI79 Gm4870-201ENSMUST00000198525 1251 ntBASIC7.4□□□□□ -1.22
Ccdc40Q8BI79 Gm2505-201ENSMUST00000200413 825 ntBASIC7.4□□□□□ -1.22
Ccdc40Q8BI79 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC7.4□□□□□ -1.22
Ccdc40Q8BI79 AC118476.2-201ENSMUST00000215206 757 ntTSL 3 BASIC7.4□□□□□ -1.22
Ccdc40Q8BI79 CT009738.1-201ENSMUST00000219031 809 ntBASIC7.4□□□□□ -1.22
Ccdc40Q8BI79 6030440G07Rik-201ENSMUST00000221849 1090 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Ccdc40Q8BI79 AC146596.1-201ENSMUST00000223507 223 ntBASIC7.4□□□□□ -1.22
Ccdc40Q8BI79 Rpsa-ps2-201ENSMUST00000059546 880 ntBASIC7.4□□□□□ -1.22
Ccdc40Q8BI79 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Ccdc40Q8BI79 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC7.4□□□□□ -1.22
Ccdc40Q8BI79 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Ccdc40Q8BI79 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Ccdc40Q8BI79 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Ccdc40Q8BI79 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.23
Ccdc40Q8BI79 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC7.4□□□□□ -1.23
Ccdc40Q8BI79 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
Ccdc40Q8BI79 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.23
Ccdc40Q8BI79 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Ccdc40Q8BI79 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC7.4□□□□□ -1.23
Ccdc40Q8BI79 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Ccdc40Q8BI79 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Ccdc40Q8BI79 Pls3-204ENSMUST00000114059 3149 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Ccdc40Q8BI79 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC7.4□□□□□ -1.23
Ccdc40Q8BI79 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Ccdc40Q8BI79 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC7.4□□□□□ -1.23
Ccdc40Q8BI79 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC7.4□□□□□ -1.23
Ccdc40Q8BI79 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 Gm45174-201ENSMUST00000208884 3065 ntBASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 Gm15930-201ENSMUST00000156603 2037 ntBASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 Gm26856-201ENSMUST00000181919 1349 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 Gm37891-201ENSMUST00000195585 1326 ntBASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 Serpina3a-202ENSMUST00000109965 1204 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 Gm13525-201ENSMUST00000120607 478 ntBASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 Gm22275-201ENSMUST00000122470 310 ntBASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 Gm24893-201ENSMUST00000122745 369 ntBASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 9530046B11Rik-201ENSMUST00000149413 1157 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 Fcor-201ENSMUST00000159364 392 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 Gm21182-201ENSMUST00000178899 794 ntBASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 Gm18709-201ENSMUST00000180564 489 ntBASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 Gm28285-204ENSMUST00000187793 601 ntAPPRIS P5 TSL 5 BASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 Gm22149-202ENSMUST00000196259 137 ntBASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 Gm42581-201ENSMUST00000201774 966 ntBASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 Gm44760-201ENSMUST00000206375 1173 ntBASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 Olfr674-ps1-201ENSMUST00000209383 946 ntBASIC7.39□□□□□ -1.23
Ccdc40Q8BI79 Olfr1345-ps1-201ENSMUST00000210627 244 ntBASIC7.39□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms