Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Fcrl5-204ENSMUST00000193229 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 4930578I07Rik-201ENSMUST00000193416 1372 ntBASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 BC106179-201ENSMUST00000055369 4128 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 Kidins220-210ENSMUST00000222941 6277 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 Fbxw10-205ENSMUST00000176577 3254 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 Phlpp2-203ENSMUST00000179721 7846 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 Gm37956-201ENSMUST00000195208 2010 ntBASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 Paqr5-202ENSMUST00000113990 1073 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 Rhox3c-201ENSMUST00000115188 1053 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 Gm12697-201ENSMUST00000118008 667 ntBASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 Gm14356-201ENSMUST00000118322 869 ntBASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 Gm13500-201ENSMUST00000119348 824 ntBASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 Gm15481-201ENSMUST00000120264 539 ntBASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 Gm15028-201ENSMUST00000120295 370 ntBASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 Pla2g2a-203ENSMUST00000135748 788 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 Phf11d-202ENSMUST00000160425 1281 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 Gm6264-201ENSMUST00000160802 624 ntBASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 Gm17655-201ENSMUST00000167969 255 ntBASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 Gm17572-201ENSMUST00000171455 420 ntBASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 Mthfr-ps1-201ENSMUST00000174153 601 ntBASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 Vmn2r-ps52-201ENSMUST00000176211 612 ntBASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 n-R5s115-201ENSMUST00000179019 119 ntBASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 Mir6357-201ENSMUST00000184246 104 ntBASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 Mir6398-201ENSMUST00000184541 102 ntBASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 9530018H14Rik-201ENSMUST00000192253 1243 ntBASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 Gm43245-201ENSMUST00000197603 468 ntBASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 Gm42625-201ENSMUST00000198611 922 ntBASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 Gm3604-203ENSMUST00000202194 736 ntTSL 3 BASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 Gm44018-201ENSMUST00000204471 407 ntBASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 Gm44788-201ENSMUST00000207605 385 ntTSL 5 BASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 Gm4977-201ENSMUST00000215709 1262 ntBASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 AC164116.2-201ENSMUST00000225398 1038 ntBASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 CT571256.1-201ENSMUST00000226045 585 ntBASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 Ifitm5-201ENSMUST00000026562 765 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 Rhox3h-201ENSMUST00000096457 1053 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 Fignl1-201ENSMUST00000047689 2961 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 Zfp426-210ENSMUST00000167457 4262 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 Nfkbiz-203ENSMUST00000114457 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 Bdnf-202ENSMUST00000111042 3905 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 Ube2v1-201ENSMUST00000060645 1586 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 Lrrc9-203ENSMUST00000161284 3817 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 E030022I16Rik-201ENSMUST00000215131 2766 ntBASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 Angpt2-201ENSMUST00000033846 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 Zscan26-202ENSMUST00000110485 4366 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 Gm5715-201ENSMUST00000196854 1465 ntBASIC8.26□□□□□ -1.09
Prpf38bQ80SY5 Trpm3-206ENSMUST00000099569 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Prpf38bQ80SY5 Gm45737-201ENSMUST00000208344 1612 ntBASIC8.25□□□□□ -1.09
Prpf38bQ80SY5 Gm38209-201ENSMUST00000192711 2169 ntTSL 5 BASIC8.25□□□□□ -1.09
Prpf38bQ80SY5 Gm37948-201ENSMUST00000192846 2169 ntTSL 5 BASIC8.25□□□□□ -1.09
Prpf38bQ80SY5 Gm37263-201ENSMUST00000195837 2169 ntTSL 5 BASIC8.25□□□□□ -1.09
Prpf38bQ80SY5 Tmem173-201ENSMUST00000115728 2302 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Prpf38bQ80SY5 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Prpf38bQ80SY5 Lars2-201ENSMUST00000038863 3894 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Prpf38bQ80SY5 Efl1-201ENSMUST00000039881 3610 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Prpf38bQ80SY5 Ctnnd1-213ENSMUST00000111687 6030 ntTSL 5 BASIC8.25□□□□□ -1.09
Prpf38bQ80SY5 Gm37552-201ENSMUST00000193939 2520 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Prpf38bQ80SY5 Klhl5-205ENSMUST00000204348 3380 ntTSL 5 BASIC8.25□□□□□ -1.09
Prpf38bQ80SY5 Mir503-201ENSMUST00000102168 71 ntBASIC8.25□□□□□ -1.09
Prpf38bQ80SY5 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC8.25□□□□□ -1.09
Prpf38bQ80SY5 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Prpf38bQ80SY5 Cd68-202ENSMUST00000108654 1008 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Prpf38bQ80SY5 Ola1-203ENSMUST00000112055 1251 ntTSL 5 BASIC8.25□□□□□ -1.09
Prpf38bQ80SY5 Lipo4-201ENSMUST00000112511 1188 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Prpf38bQ80SY5 Gm13195-201ENSMUST00000117229 261 ntBASIC8.25□□□□□ -1.09
Prpf38bQ80SY5 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC8.25□□□□□ -1.09
Prpf38bQ80SY5 Gm13038-201ENSMUST00000119886 459 ntBASIC8.25□□□□□ -1.09
Prpf38bQ80SY5 Gm12163-201ENSMUST00000121597 389 ntBASIC8.25□□□□□ -1.09
Prpf38bQ80SY5 Gm12929-201ENSMUST00000122406 370 ntBASIC8.25□□□□□ -1.09
Prpf38bQ80SY5 Gm15878-201ENSMUST00000127561 306 ntBASIC8.25□□□□□ -1.09
Prpf38bQ80SY5 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Prpf38bQ80SY5 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Prpf38bQ80SY5 Gm22186-201ENSMUST00000157822 122 ntBASIC8.25□□□□□ -1.09
Prpf38bQ80SY5 Gm24768-201ENSMUST00000158512 94 ntBASIC8.25□□□□□ -1.09
Prpf38bQ80SY5 Gm18560-201ENSMUST00000173463 1123 ntBASIC8.25□□□□□ -1.09
Prpf38bQ80SY5 Gm24155-201ENSMUST00000175259 110 ntBASIC8.25□□□□□ -1.09
Prpf38bQ80SY5 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC8.25□□□□□ -1.09
Prpf38bQ80SY5 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Prpf38bQ80SY5 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Prpf38bQ80SY5 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Prpf38bQ80SY5 Mir6989-201ENSMUST00000184812 65 ntBASIC8.25□□□□□ -1.09
Prpf38bQ80SY5 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC8.25□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 100.9 ms