Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Mir1900-201ENSMUST00000122714 78 ntBASIC8.15□□□□□ -1.1
Nup98Q6PFD9 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC8.15□□□□□ -1.1
Nup98Q6PFD9 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC8.15□□□□□ -1.1
Nup98Q6PFD9 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Nup98Q6PFD9 Gm11107-201ENSMUST00000165414 505 ntBASIC8.15□□□□□ -1.1
Nup98Q6PFD9 Gm6726-201ENSMUST00000172786 681 ntBASIC8.15□□□□□ -1.1
Nup98Q6PFD9 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC8.15□□□□□ -1.1
Nup98Q6PFD9 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC8.15□□□□□ -1.1
Nup98Q6PFD9 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Nup98Q6PFD9 Gm29663-201ENSMUST00000186962 853 ntBASIC8.15□□□□□ -1.1
Nup98Q6PFD9 Gm37809-201ENSMUST00000195050 931 ntBASIC8.15□□□□□ -1.1
Nup98Q6PFD9 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC8.15□□□□□ -1.1
Nup98Q6PFD9 Gm43048-201ENSMUST00000196101 388 ntBASIC8.15□□□□□ -1.1
Nup98Q6PFD9 Gm43748-201ENSMUST00000202329 1233 ntBASIC8.15□□□□□ -1.1
Nup98Q6PFD9 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Nup98Q6PFD9 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Nup98Q6PFD9 AC154806.1-203ENSMUST00000227370 1032 ntBASIC8.15□□□□□ -1.1
Nup98Q6PFD9 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Nup98Q6PFD9 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Nup98Q6PFD9 Mir3068-201ENSMUST00000083004 136 ntBASIC8.15□□□□□ -1.1
Nup98Q6PFD9 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Nup98Q6PFD9 Olfr1254-201ENSMUST00000099764 945 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Nup98Q6PFD9 Gm43221-201ENSMUST00000197612 2071 ntBASIC8.15□□□□□ -1.1
Nup98Q6PFD9 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC8.15□□□□□ -1.1
Nup98Q6PFD9 3632451O06Rik-201ENSMUST00000036972 8831 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Nup98Q6PFD9 Umodl1-202ENSMUST00000066981 4662 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Nup98Q6PFD9 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Nup98Q6PFD9 Gm43496-201ENSMUST00000201682 3001 ntBASIC8.15□□□□□ -1.1
Nup98Q6PFD9 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Nup98Q6PFD9 Lyrm9-203ENSMUST00000147875 8035 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Nup98Q6PFD9 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC8.15□□□□□ -1.1
Nup98Q6PFD9 Cacna1c-210ENSMUST00000187474 6911 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Nup98Q6PFD9 Amy2b-201ENSMUST00000120184 1577 ntBASIC8.15□□□□□ -1.1
Nup98Q6PFD9 Med1-203ENSMUST00000107545 8024 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Nup98Q6PFD9 Tdrd1-201ENSMUST00000078723 4887 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Nup98Q6PFD9 Pogz-201ENSMUST00000042402 4775 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
Nup98Q6PFD9 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Nup98Q6PFD9 Slc16a14-201ENSMUST00000027422 3207 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Nup98Q6PFD9 Gm31049-201ENSMUST00000201516 1302 ntBASIC8.15□□□□□ -1.11
Nup98Q6PFD9 Olfr1512-202ENSMUST00000214980 2082 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
Nup98Q6PFD9 Zfp451-202ENSMUST00000044455 11876 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
Nup98Q6PFD9 Olfr130-203ENSMUST00000217390 5959 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
Nup98Q6PFD9 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.11
Nup98Q6PFD9 Tlk2-203ENSMUST00000106939 5494 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.11
Nup98Q6PFD9 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
Nup98Q6PFD9 Gm24473-201ENSMUST00000104483 131 ntBASIC8.15□□□□□ -1.11
Nup98Q6PFD9 Gm25346-201ENSMUST00000104509 128 ntBASIC8.15□□□□□ -1.11
Nup98Q6PFD9 Gm11370-201ENSMUST00000120583 260 ntBASIC8.15□□□□□ -1.11
Nup98Q6PFD9 Olfr1017-ps1-201ENSMUST00000121263 664 ntBASIC8.15□□□□□ -1.11
Nup98Q6PFD9 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC8.15□□□□□ -1.11
Nup98Q6PFD9 Gm26357-201ENSMUST00000158218 115 ntBASIC8.15□□□□□ -1.11
Nup98Q6PFD9 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC8.15□□□□□ -1.11
Nup98Q6PFD9 Scgb2b33-201ENSMUST00000187413 334 ntBASIC8.15□□□□□ -1.11
Nup98Q6PFD9 Gm37189-201ENSMUST00000192131 298 ntBASIC8.15□□□□□ -1.11
Nup98Q6PFD9 Gm37223-206ENSMUST00000195070 699 ntTSL 3 BASIC8.15□□□□□ -1.11
Nup98Q6PFD9 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC8.15□□□□□ -1.11
Nup98Q6PFD9 Gm43762-201ENSMUST00000201521 295 ntBASIC8.15□□□□□ -1.11
Nup98Q6PFD9 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC8.15□□□□□ -1.11
Nup98Q6PFD9 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Nup98Q6PFD9 Gm19340-201ENSMUST00000221995 345 ntBASIC8.15□□□□□ -1.11
Nup98Q6PFD9 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Nup98Q6PFD9 Olfr523-205ENSMUST00000215785 4165 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.11
Nup98Q6PFD9 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Nup98Q6PFD9 Gm7961-201ENSMUST00000201338 1436 ntBASIC8.14□□□□□ -1.11
Nup98Q6PFD9 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Nup98Q6PFD9 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Nup98Q6PFD9 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Nup98Q6PFD9 Gm45767-201ENSMUST00000212778 4561 ntBASIC8.14□□□□□ -1.11
Nup98Q6PFD9 Gm15834-202ENSMUST00000139825 2613 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Nup98Q6PFD9 Star-201ENSMUST00000033979 4046 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Nup98Q6PFD9 Tsc1-202ENSMUST00000113867 7682 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Nup98Q6PFD9 Tsc1-201ENSMUST00000028155 7674 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Nup98Q6PFD9 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Nup98Q6PFD9 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Nup98Q6PFD9 Gm44652-201ENSMUST00000208648 2854 ntBASIC8.14□□□□□ -1.11
Nup98Q6PFD9 Gm43507-202ENSMUST00000200281 2011 ntTSL 5 BASIC8.14□□□□□ -1.11
Nup98Q6PFD9 AC125409.2-201ENSMUST00000221888 2158 ntBASIC8.14□□□□□ -1.11
Nup98Q6PFD9 Pcdh15-225ENSMUST00000149977 5843 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Nup98Q6PFD9 Khdc1a-201ENSMUST00000088407 1987 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Nup98Q6PFD9 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Nup98Q6PFD9 Gm13490-201ENSMUST00000143870 2409 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Nup98Q6PFD9 Clasp2-207ENSMUST00000214522 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Nup98Q6PFD9 Smco3-201ENSMUST00000068293 2056 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Nup98Q6PFD9 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC8.14□□□□□ -1.11
Nup98Q6PFD9 Gm13400-201ENSMUST00000117436 380 ntBASIC8.14□□□□□ -1.11
Nup98Q6PFD9 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC8.14□□□□□ -1.11
Nup98Q6PFD9 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC8.14□□□□□ -1.11
Nup98Q6PFD9 Gm26557-201ENSMUST00000180756 493 ntBASIC8.14□□□□□ -1.11
Nup98Q6PFD9 Gm28586-201ENSMUST00000189857 456 ntBASIC8.14□□□□□ -1.11
Nup98Q6PFD9 Gm37177-201ENSMUST00000193768 417 ntBASIC8.14□□□□□ -1.11
Nup98Q6PFD9 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC8.14□□□□□ -1.11
Nup98Q6PFD9 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC8.14□□□□□ -1.11
Nup98Q6PFD9 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC8.14□□□□□ -1.11
Nup98Q6PFD9 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Nup98Q6PFD9 Erc1-201ENSMUST00000032279 8356 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Nup98Q6PFD9 AC158986.1-201ENSMUST00000228391 3455 ntBASIC8.14□□□□□ -1.11
Nup98Q6PFD9 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC8.14□□□□□ -1.11
Nup98Q6PFD9 Gm37783-201ENSMUST00000192025 1856 ntBASIC8.14□□□□□ -1.11
Nup98Q6PFD9 Arfgef1-203ENSMUST00000131556 3424 ntTSL 5 BASIC8.14□□□□□ -1.11
Nup98Q6PFD9 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms