Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm29659-201ENSMUST00000187063 696 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm28473-201ENSMUST00000187325 696 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm28558-201ENSMUST00000187373 696 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm28682-201ENSMUST00000187430 696 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm28738-201ENSMUST00000187480 696 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm28949-201ENSMUST00000187805 696 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm28773-201ENSMUST00000187925 696 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm29319-201ENSMUST00000188060 696 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm29422-201ENSMUST00000188062 694 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm28734-201ENSMUST00000188104 696 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm28787-201ENSMUST00000188357 696 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm29312-201ENSMUST00000188724 696 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm29451-201ENSMUST00000188862 696 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm29637-201ENSMUST00000188877 696 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm29033-201ENSMUST00000189114 696 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm29614-201ENSMUST00000189263 694 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm28751-201ENSMUST00000189287 696 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm29559-201ENSMUST00000189412 696 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm28272-201ENSMUST00000189512 696 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm28483-201ENSMUST00000189519 696 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm28123-201ENSMUST00000189725 696 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm28368-201ENSMUST00000189804 696 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm29119-201ENSMUST00000189973 696 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm28716-201ENSMUST00000190217 696 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm29239-201ENSMUST00000190304 696 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm28837-201ENSMUST00000190397 696 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm28968-201ENSMUST00000190413 696 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm28531-201ENSMUST00000190529 696 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm28165-201ENSMUST00000190669 694 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm29181-201ENSMUST00000191288 696 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm38229-201ENSMUST00000191931 696 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm32347-201ENSMUST00000192944 696 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm38121-201ENSMUST00000193213 696 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Ighv5-5-201ENSMUST00000193826 329 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm38035-201ENSMUST00000194427 696 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm38350-201ENSMUST00000194789 696 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm37990-201ENSMUST00000195821 696 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC8.37□□□□□ -1.07
Vps54Q5SPW0 AL713985.1-201ENSMUST00000219030 420 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm4808-201ENSMUST00000222283 1203 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 AC131029.2-203ENSMUST00000228116 1244 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm44178-201ENSMUST00000205229 2930 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Dcn-202ENSMUST00000163448 1758 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Arfgef3-202ENSMUST00000215836 14579 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Tll2-201ENSMUST00000025986 3369 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm5361-201ENSMUST00000211041 1498 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Camk2d-205ENSMUST00000106401 3059 ntTSL 5 BASIC8.37□□□□□ -1.07
Vps54Q5SPW0 A430110L20Rik-202ENSMUST00000181680 2513 ntBASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Cfap57-201ENSMUST00000071972 4020 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm8232-201ENSMUST00000164277 1402 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Vps54Q5SPW0 Gm43537-201ENSMUST00000199064 3110 ntBASIC8.36□□□□□ -1.07
Vps54Q5SPW0 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC8.36□□□□□ -1.07
Vps54Q5SPW0 Gm42568-201ENSMUST00000195639 1841 ntBASIC8.36□□□□□ -1.07
Vps54Q5SPW0 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Vps54Q5SPW0 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Vps54Q5SPW0 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Vps54Q5SPW0 Gm13877-201ENSMUST00000120614 417 ntBASIC8.36□□□□□ -1.07
Vps54Q5SPW0 Gm7746-201ENSMUST00000120966 503 ntBASIC8.36□□□□□ -1.07
Vps54Q5SPW0 Gm23888-201ENSMUST00000122690 253 ntBASIC8.36□□□□□ -1.07
Vps54Q5SPW0 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC8.36□□□□□ -1.07
Vps54Q5SPW0 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Vps54Q5SPW0 Gm25556-201ENSMUST00000158077 144 ntBASIC8.36□□□□□ -1.07
Vps54Q5SPW0 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC8.36□□□□□ -1.07
Vps54Q5SPW0 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC8.36□□□□□ -1.07
Vps54Q5SPW0 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Vps54Q5SPW0 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Vps54Q5SPW0 Akap13-205ENSMUST00000207750 12597 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Vps54Q5SPW0 Igsf1-201ENSMUST00000033442 4421 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Vps54Q5SPW0 Gm36930-201ENSMUST00000195431 2376 ntBASIC8.36□□□□□ -1.07
Vps54Q5SPW0 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Vps54Q5SPW0 Zmym5-202ENSMUST00000111285 5351 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Vps54Q5SPW0 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Vps54Q5SPW0 AC132596.1-201ENSMUST00000223043 2263 ntTSL 5 BASIC8.36□□□□□ -1.07
Vps54Q5SPW0 Grik1-209ENSMUST00000227986 2942 ntBASIC8.36□□□□□ -1.07
Vps54Q5SPW0 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Vps54Q5SPW0 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
Vps54Q5SPW0 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Vps54Q5SPW0 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Vps54Q5SPW0 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Vps54Q5SPW0 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Vps54Q5SPW0 C8a-202ENSMUST00000064873 3617 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
Vps54Q5SPW0 Focad-208ENSMUST00000159342 5456 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Vps54Q5SPW0 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Vps54Q5SPW0 Folh1-202ENSMUST00000107271 2516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Vps54Q5SPW0 Psma2-201ENSMUST00000170836 2911 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Vps54Q5SPW0 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Vps54Q5SPW0 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Vps54Q5SPW0 Gm9874-202ENSMUST00000194957 1464 ntBASIC8.35□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms