Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Atp8a1-207ENSMUST00000135930 8069 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Nphp4P59240 Ptk2b-208ENSMUST00000178730 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Nphp4P59240 Casr-203ENSMUST00000172826 3659 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Nphp4P59240 Gm39041-201ENSMUST00000205557 3902 ntBASIC9.46□□□□□ -0.9
Nphp4P59240 Gm12447-201ENSMUST00000119110 470 ntBASIC9.46□□□□□ -0.9
Nphp4P59240 Olfr1017-ps1-201ENSMUST00000121263 664 ntBASIC9.46□□□□□ -0.9
Nphp4P59240 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Nphp4P59240 Gm14747-201ENSMUST00000149888 984 ntBASIC9.46□□□□□ -0.9
Nphp4P59240 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC9.46□□□□□ -0.9
Nphp4P59240 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC9.46□□□□□ -0.9
Nphp4P59240 AC117240.1-201ENSMUST00000199436 61 ntBASIC9.46□□□□□ -0.9
Nphp4P59240 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC9.46□□□□□ -0.9
Nphp4P59240 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC9.46□□□□□ -0.9
Nphp4P59240 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC9.46□□□□□ -0.9
Nphp4P59240 Gm17950-201ENSMUST00000214617 646 ntBASIC9.46□□□□□ -0.9
Nphp4P59240 AC156016.2-201ENSMUST00000228200 525 ntBASIC9.46□□□□□ -0.9
Nphp4P59240 AC158954.1-201ENSMUST00000228272 1006 ntBASIC9.46□□□□□ -0.9
Nphp4P59240 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Nphp4P59240 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC9.46□□□□□ -0.9
Nphp4P59240 Gm24621-201ENSMUST00000082679 140 ntBASIC9.46□□□□□ -0.9
Nphp4P59240 Gm44745-201ENSMUST00000206563 2723 ntBASIC9.46□□□□□ -0.9
Nphp4P59240 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Nphp4P59240 Cstf2t-201ENSMUST00000066039 3750 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Nphp4P59240 Gm16123-201ENSMUST00000118647 1517 ntBASIC9.46□□□□□ -0.9
Nphp4P59240 Gm43029-201ENSMUST00000201829 1535 ntBASIC9.46□□□□□ -0.9
Nphp4P59240 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nphp4P59240 Slc12a1-201ENSMUST00000028630 4645 ntAPPRIS P5 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nphp4P59240 6530403H02Rik-202ENSMUST00000182124 3191 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Nphp4P59240 Srcap-206ENSMUST00000186954 9345 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Nphp4P59240 Gm15413-201ENSMUST00000155101 1935 ntTSL 2 BASIC9.45□□□□□ -0.9
Nphp4P59240 Gm37755-201ENSMUST00000195880 2179 ntBASIC9.45□□□□□ -0.9
Nphp4P59240 AC124516.2-201ENSMUST00000221455 1829 ntBASIC9.45□□□□□ -0.9
Nphp4P59240 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nphp4P59240 Dclre1b-204ENSMUST00000106834 3705 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Nphp4P59240 Cyp2c55-201ENSMUST00000025966 1995 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nphp4P59240 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nphp4P59240 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nphp4P59240 Gm26340-201ENSMUST00000102365 99 ntBASIC9.45□□□□□ -0.9
Nphp4P59240 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Nphp4P59240 Gm12842-201ENSMUST00000117298 476 ntBASIC9.45□□□□□ -0.9
Nphp4P59240 Gm11609-201ENSMUST00000121926 793 ntBASIC9.45□□□□□ -0.9
Nphp4P59240 Gm14613-201ENSMUST00000122239 752 ntBASIC9.45□□□□□ -0.9
Nphp4P59240 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC9.45□□□□□ -0.9
Nphp4P59240 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC9.45□□□□□ -0.9
Nphp4P59240 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC9.45□□□□□ -0.9
Nphp4P59240 Gm7270-201ENSMUST00000195818 1128 ntBASIC9.45□□□□□ -0.9
Nphp4P59240 Gm42443-201ENSMUST00000198084 1155 ntBASIC9.45□□□□□ -0.9
Nphp4P59240 Gm20223-201ENSMUST00000199932 805 ntBASIC9.45□□□□□ -0.9
Nphp4P59240 Gm44911-201ENSMUST00000208436 1062 ntBASIC9.45□□□□□ -0.9
Nphp4P59240 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Nphp4P59240 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC9.45□□□□□ -0.9
Nphp4P59240 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Nphp4P59240 AC154757.2-201ENSMUST00000228885 743 ntBASIC9.45□□□□□ -0.9
Nphp4P59240 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nphp4P59240 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nphp4P59240 Itih3-201ENSMUST00000006697 2992 ntAPPRIS P2 TSL 5 BASIC9.45□□□□□ -0.9
Nphp4P59240 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Nphp4P59240 Fam160a2-208ENSMUST00000179474 10853 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nphp4P59240 Gm17638-201ENSMUST00000181255 4343 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Nphp4P59240 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
Nphp4P59240 Luzp4-201ENSMUST00000101185 2023 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Nphp4P59240 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Nphp4P59240 Ppp2r3c-201ENSMUST00000021410 4216 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nphp4P59240 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nphp4P59240 Gm45297-201ENSMUST00000209893 3483 ntBASIC9.44□□□□□ -0.9
Nphp4P59240 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nphp4P59240 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Nphp4P59240 Slc38a1-203ENSMUST00000100262 7752 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nphp4P59240 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nphp4P59240 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Nphp4P59240 Gm37924-201ENSMUST00000195470 3647 ntBASIC9.44□□□□□ -0.9
Nphp4P59240 Zfp455-202ENSMUST00000120861 2712 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
Nphp4P59240 Myt1-203ENSMUST00000108757 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nphp4P59240 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nphp4P59240 Cdh9-201ENSMUST00000026432 2892 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Nphp4P59240 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC9.44□□□□□ -0.9
Nphp4P59240 Gm11370-201ENSMUST00000120583 260 ntBASIC9.44□□□□□ -0.9
Nphp4P59240 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC9.44□□□□□ -0.9
Nphp4P59240 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Nphp4P59240 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Nphp4P59240 Gm3140-201ENSMUST00000163523 481 ntBASIC9.44□□□□□ -0.9
Nphp4P59240 Gm20615-201ENSMUST00000177503 705 ntBASIC9.44□□□□□ -0.9
Nphp4P59240 Gm43235-201ENSMUST00000200121 297 ntBASIC9.44□□□□□ -0.9
Nphp4P59240 Gm44705-201ENSMUST00000206719 339 ntBASIC9.44□□□□□ -0.9
Nphp4P59240 AC133203.1-201ENSMUST00000228241 301 ntBASIC9.44□□□□□ -0.9
Nphp4P59240 Gm6563-201ENSMUST00000056396 869 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Nphp4P59240 Olfr448-201ENSMUST00000058668 933 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Nphp4P59240 4930511E03Rik-201ENSMUST00000203778 2232 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Nphp4P59240 Ice1-201ENSMUST00000043493 7667 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Nphp4P59240 Gm42679-201ENSMUST00000197086 2906 ntBASIC9.44□□□□□ -0.9
Nphp4P59240 AC123738.2-201ENSMUST00000223791 1899 ntBASIC9.44□□□□□ -0.9
Nphp4P59240 Fbxw10-203ENSMUST00000150989 3267 ntAPPRIS P3 TSL 5 BASIC9.44□□□□□ -0.9
Nphp4P59240 Trim66-203ENSMUST00000106741 4417 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nphp4P59240 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nphp4P59240 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC9.43□□□□□ -0.9
Nphp4P59240 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Nphp4P59240 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nphp4P59240 Rgs8-202ENSMUST00000111810 5614 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nphp4P59240 Gm44704-201ENSMUST00000208963 1990 ntBASIC9.43□□□□□ -0.9
Nphp4P59240 Ank3-247ENSMUST00000218680 5500 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms