Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Gm18451-201ENSMUST00000196759 1719 ntBASIC6.33□□□□□ -1.4
Rfx3P48381 Cmah-208ENSMUST00000224819 9482 ntBASIC6.33□□□□□ -1.4
Rfx3P48381 Gm38077-201ENSMUST00000193657 3245 ntBASIC6.33□□□□□ -1.4
Rfx3P48381 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rfx3P48381 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
Rfx3P48381 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
Rfx3P48381 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rfx3P48381 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Rfx3P48381 Gm28819-202ENSMUST00000187416 1335 ntTSL 5 BASIC6.33□□□□□ -1.4
Rfx3P48381 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Rfx3P48381 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rfx3P48381 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rfx3P48381 Gm36981-201ENSMUST00000192340 4485 ntBASIC6.33□□□□□ -1.4
Rfx3P48381 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Rfx3P48381 Gm24284-201ENSMUST00000104240 142 ntBASIC6.33□□□□□ -1.4
Rfx3P48381 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Rfx3P48381 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
Rfx3P48381 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rfx3P48381 Rhox4g-201ENSMUST00000115166 979 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rfx3P48381 Gm8624-201ENSMUST00000118083 432 ntBASIC6.33□□□□□ -1.4
Rfx3P48381 Gm11383-201ENSMUST00000121346 807 ntBASIC6.33□□□□□ -1.4
Rfx3P48381 Gm12630-201ENSMUST00000121575 784 ntBASIC6.33□□□□□ -1.4
Rfx3P48381 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC6.33□□□□□ -1.4
Rfx3P48381 Gm2709-201ENSMUST00000142979 350 ntBASIC6.33□□□□□ -1.4
Rfx3P48381 Lrrc51-210ENSMUST00000163903 939 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Rfx3P48381 Slc29a1-208ENSMUST00000164769 1226 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Rfx3P48381 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rfx3P48381 Gm26910-201ENSMUST00000180450 698 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Rfx3P48381 Gm5272-201ENSMUST00000182730 982 ntBASIC6.33□□□□□ -1.4
Rfx3P48381 Gm21430-201ENSMUST00000182998 998 ntBASIC6.33□□□□□ -1.4
Rfx3P48381 Mir7005-201ENSMUST00000185089 69 ntBASIC6.33□□□□□ -1.4
Rfx3P48381 Gm28087-201ENSMUST00000189195 767 ntTSL 5 BASIC6.33□□□□□ -1.4
Rfx3P48381 Gm38022-201ENSMUST00000191762 403 ntBASIC6.33□□□□□ -1.4
Rfx3P48381 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC6.33□□□□□ -1.4
Rfx3P48381 Gm9710-201ENSMUST00000198053 499 ntBASIC6.33□□□□□ -1.4
Rfx3P48381 Gm42734-201ENSMUST00000201656 878 ntBASIC6.33□□□□□ -1.4
Rfx3P48381 Gm43040-201ENSMUST00000202399 558 ntBASIC6.33□□□□□ -1.4
Rfx3P48381 Gm20274-201ENSMUST00000206967 584 ntBASIC6.33□□□□□ -1.4
Rfx3P48381 Gm7789-201ENSMUST00000210473 701 ntTSL 3 BASIC6.33□□□□□ -1.4
Rfx3P48381 Gm3428-204ENSMUST00000214488 1020 ntTSL 5 BASIC6.33□□□□□ -1.4
Rfx3P48381 RMST_1.1-213ENSMUST00000220288 792 ntTSL 5 BASIC6.33□□□□□ -1.4
Rfx3P48381 AC132590.1-201ENSMUST00000224374 1164 ntBASIC6.33□□□□□ -1.4
Rfx3P48381 Ropn1-201ENSMUST00000023530 875 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rfx3P48381 Mphosph6-201ENSMUST00000034303 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rfx3P48381 Ly6c1-201ENSMUST00000065408 844 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rfx3P48381 Gm20900-201ENSMUST00000078729 472 ntBASIC6.33□□□□□ -1.4
Rfx3P48381 Tcl1b2-201ENSMUST00000081379 1009 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rfx3P48381 Rhox4e-201ENSMUST00000089075 978 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rfx3P48381 Rhox4b-201ENSMUST00000096458 887 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rfx3P48381 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Rfx3P48381 Gm37525-201ENSMUST00000193499 2871 ntBASIC6.33□□□□□ -1.4
Rfx3P48381 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Rfx3P48381 Gm43279-201ENSMUST00000202376 2512 ntBASIC6.33□□□□□ -1.4
Rfx3P48381 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC6.33□□□□□ -1.4
Rfx3P48381 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
Rfx3P48381 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Rfx3P48381 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Rfx3P48381 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Rfx3P48381 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Rfx3P48381 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Rfx3P48381 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Rfx3P48381 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC6.32□□□□□ -1.4
Rfx3P48381 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Rfx3P48381 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Rfx3P48381 Slc25a53-214ENSMUST00000171738 2567 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
Rfx3P48381 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Rfx3P48381 Gm6567-201ENSMUST00000205529 2095 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Rfx3P48381 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Rfx3P48381 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Rfx3P48381 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC6.32□□□□□ -1.4
Rfx3P48381 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Rfx3P48381 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Rfx3P48381 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Rfx3P48381 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Rfx3P48381 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Rfx3P48381 Gm37945-201ENSMUST00000192536 4367 ntBASIC6.32□□□□□ -1.4
Rfx3P48381 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Rfx3P48381 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC6.32□□□□□ -1.4
Rfx3P48381 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC6.32□□□□□ -1.4
Rfx3P48381 Ceacam1-208ENSMUST00000206676 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Rfx3P48381 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Rfx3P48381 Gm22671-201ENSMUST00000104420 134 ntBASIC6.32□□□□□ -1.4
Rfx3P48381 Gm14745-201ENSMUST00000118480 1096 ntBASIC6.32□□□□□ -1.4
Rfx3P48381 Gm11987-201ENSMUST00000118524 381 ntBASIC6.32□□□□□ -1.4
Rfx3P48381 Rps8-ps3-201ENSMUST00000121011 650 ntBASIC6.32□□□□□ -1.4
Rfx3P48381 Gm12410-201ENSMUST00000124989 405 ntTSL 3 BASIC6.32□□□□□ -1.4
Rfx3P48381 Gm2735-201ENSMUST00000136133 277 ntBASIC6.32□□□□□ -1.4
Rfx3P48381 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Rfx3P48381 Tvp23bos-201ENSMUST00000148598 1011 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Rfx3P48381 Gm14241-201ENSMUST00000151260 264 ntTSL 5 BASIC6.32□□□□□ -1.4
Rfx3P48381 Gm12484-201ENSMUST00000156311 581 ntTSL 5 BASIC6.32□□□□□ -1.4
Rfx3P48381 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC6.32□□□□□ -1.4
Rfx3P48381 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Rfx3P48381 Gm4308-201ENSMUST00000179735 914 ntBASIC6.32□□□□□ -1.4
Rfx3P48381 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
Rfx3P48381 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
Rfx3P48381 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC6.32□□□□□ -1.4
Rfx3P48381 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC6.32□□□□□ -1.4
Rfx3P48381 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC6.32□□□□□ -1.4
Rfx3P48381 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC6.32□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms