Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Rfx1P48377 C87499-201ENSMUST00000053304 1901 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Rfx1P48377 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC8.88□□□□□ -0.99
Rfx1P48377 Olfr1239-202ENSMUST00000216762 1643 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Rfx1P48377 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC8.88□□□□□ -0.99
Rfx1P48377 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Rfx1P48377 Olfr1393-202ENSMUST00000213323 3010 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Rfx1P48377 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Rfx1P48377 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Rfx1P48377 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Rfx1P48377 Gm2654-201ENSMUST00000221381 1592 ntBASIC8.88□□□□□ -0.99
Rfx1P48377 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Rfx1P48377 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Rfx1P48377 Gm13732-201ENSMUST00000117753 535 ntBASIC8.88□□□□□ -0.99
Rfx1P48377 Gm13622-201ENSMUST00000120658 433 ntBASIC8.88□□□□□ -0.99
Rfx1P48377 Gm12222-201ENSMUST00000121368 260 ntBASIC8.88□□□□□ -0.99
Rfx1P48377 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC8.88□□□□□ -0.99
Rfx1P48377 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC8.88□□□□□ -0.99
Rfx1P48377 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC8.88□□□□□ -0.99
Rfx1P48377 Gm14547-201ENSMUST00000138341 371 ntTSL 5 BASIC8.88□□□□□ -0.99
Rfx1P48377 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Rfx1P48377 BC016548-201ENSMUST00000144657 640 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Rfx1P48377 Gm16026-202ENSMUST00000159695 772 ntBASIC8.88□□□□□ -0.99
Rfx1P48377 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC8.88□□□□□ -0.99
Rfx1P48377 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC8.88□□□□□ -0.99
Rfx1P48377 Gm9381-201ENSMUST00000182285 1012 ntBASIC8.88□□□□□ -0.99
Rfx1P48377 Gm26977-201ENSMUST00000183151 996 ntBASIC8.88□□□□□ -0.99
Rfx1P48377 Gm18303-201ENSMUST00000190055 1176 ntBASIC8.88□□□□□ -0.99
Rfx1P48377 Gm28294-201ENSMUST00000191154 386 ntTSL 2 BASIC8.88□□□□□ -0.99
Rfx1P48377 Gm29462-201ENSMUST00000191458 288 ntBASIC8.88□□□□□ -0.99
Rfx1P48377 Gm7285-201ENSMUST00000198801 580 ntBASIC8.88□□□□□ -0.99
Rfx1P48377 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Rfx1P48377 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC8.88□□□□□ -0.99
Rfx1P48377 Gm45795-201ENSMUST00000211847 400 ntBASIC8.88□□□□□ -0.99
Rfx1P48377 AC158518.1-201ENSMUST00000216435 320 ntTSL 5 BASIC8.88□□□□□ -0.99
Rfx1P48377 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC8.88□□□□□ -0.99
Rfx1P48377 Gm46323-201ENSMUST00000223136 628 ntTSL 5 BASIC8.88□□□□□ -0.99
Rfx1P48377 CT030732.1-201ENSMUST00000226885 246 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Rfx1P48377 AC132918.1-201ENSMUST00000227877 925 ntBASIC8.88□□□□□ -0.99
Rfx1P48377 Olfr13-201ENSMUST00000059512 1054 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Rfx1P48377 Trex1-201ENSMUST00000061973 1084 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Rfx1P48377 Gm25129-201ENSMUST00000082651 133 ntBASIC8.88□□□□□ -0.99
Rfx1P48377 Vcan-206ENSMUST00000159910 8332 ntTSL 5 BASIC8.88□□□□□ -0.99
Rfx1P48377 Gm37968-201ENSMUST00000195131 3201 ntBASIC8.88□□□□□ -0.99
Rfx1P48377 Gm31614-201ENSMUST00000215504 3231 ntTSL 5 BASIC8.88□□□□□ -0.99
Rfx1P48377 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Rfx1P48377 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Rfx1P48377 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Rfx1P48377 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Rfx1P48377 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC8.88□□□□□ -0.99
Rfx1P48377 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Rfx1P48377 Gm43022-201ENSMUST00000197067 4268 ntBASIC8.88□□□□□ -0.99
Rfx1P48377 Gm45887-201ENSMUST00000212672 2998 ntBASIC8.88□□□□□ -0.99
Rfx1P48377 AC138284.1-201ENSMUST00000214258 3236 ntBASIC8.88□□□□□ -0.99
Rfx1P48377 Mbd5-201ENSMUST00000047413 8543 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
Rfx1P48377 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Rfx1P48377 Olfr975-202ENSMUST00000216647 2848 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Rfx1P48377 Gm43497-201ENSMUST00000201137 2316 ntBASIC8.87□□□□□ -0.99
Rfx1P48377 Gm16421-201ENSMUST00000117616 1557 ntBASIC8.87□□□□□ -0.99
Rfx1P48377 Gm44130-201ENSMUST00000205157 3004 ntBASIC8.87□□□□□ -0.99
Rfx1P48377 Gm7869-201ENSMUST00000121457 1322 ntBASIC8.87□□□□□ -0.99
Rfx1P48377 Olfr15-202ENSMUST00000214238 6135 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Rfx1P48377 Gm44014-201ENSMUST00000205150 1509 ntBASIC8.87□□□□□ -0.99
Rfx1P48377 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Rfx1P48377 4930471M09Rik-202ENSMUST00000206475 1990 ntBASIC8.87□□□□□ -0.99
Rfx1P48377 Atp5h-203ENSMUST00000106537 682 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Rfx1P48377 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC8.87□□□□□ -0.99
Rfx1P48377 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC8.87□□□□□ -0.99
Rfx1P48377 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC8.87□□□□□ -0.99
Rfx1P48377 Rgs8-204ENSMUST00000111814 678 ntTSL 3 BASIC8.87□□□□□ -0.99
Rfx1P48377 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Rfx1P48377 Gm12604-201ENSMUST00000118382 380 ntBASIC8.87□□□□□ -0.99
Rfx1P48377 Gm11295-201ENSMUST00000121379 803 ntBASIC8.87□□□□□ -0.99
Rfx1P48377 Gm15989-201ENSMUST00000121895 498 ntBASIC8.87□□□□□ -0.99
Rfx1P48377 Gm13269-201ENSMUST00000143458 655 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Rfx1P48377 Gm24994-201ENSMUST00000157414 121 ntBASIC8.87□□□□□ -0.99
Rfx1P48377 Gm24236-201ENSMUST00000157794 134 ntBASIC8.87□□□□□ -0.99
Rfx1P48377 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC8.87□□□□□ -0.99
Rfx1P48377 Gm8902-201ENSMUST00000174341 1096 ntBASIC8.87□□□□□ -0.99
Rfx1P48377 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC8.87□□□□□ -0.99
Rfx1P48377 Gm19705-204ENSMUST00000181524 413 ntTSL 2 BASIC8.87□□□□□ -0.99
Rfx1P48377 Mir6912-201ENSMUST00000184456 70 ntBASIC8.87□□□□□ -0.99
Rfx1P48377 Gm8307-201ENSMUST00000187682 1150 ntBASIC8.87□□□□□ -0.99
Rfx1P48377 4930449E01Rik-202ENSMUST00000188698 532 ntTSL 3 BASIC8.87□□□□□ -0.99
Rfx1P48377 Gm29562-201ENSMUST00000190113 904 ntBASIC8.87□□□□□ -0.99
Rfx1P48377 Tmem265-202ENSMUST00000190278 587 ntTSL 3 BASIC8.87□□□□□ -0.99
Rfx1P48377 1700016D06Rik-202ENSMUST00000190741 604 ntTSL 2 BASIC8.87□□□□□ -0.99
Rfx1P48377 Pdc-204ENSMUST00000191228 1235 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Rfx1P48377 Gm37481-201ENSMUST00000195176 403 ntBASIC8.87□□□□□ -0.99
Rfx1P48377 Gm37989-201ENSMUST00000195202 803 ntBASIC8.87□□□□□ -0.99
Rfx1P48377 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Rfx1P48377 Gm5857-201ENSMUST00000198953 493 ntBASIC8.87□□□□□ -0.99
Rfx1P48377 Gm43008-201ENSMUST00000202346 286 ntBASIC8.87□□□□□ -0.99
Rfx1P48377 Gm19254-201ENSMUST00000204828 294 ntBASIC8.87□□□□□ -0.99
Rfx1P48377 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Rfx1P48377 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC8.87□□□□□ -0.99
Rfx1P48377 AC119987.1-201ENSMUST00000212316 848 ntBASIC8.87□□□□□ -0.99
Rfx1P48377 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC8.87□□□□□ -0.99
Rfx1P48377 Gm18972-201ENSMUST00000218873 630 ntBASIC8.87□□□□□ -0.99
Rfx1P48377 AC129975.2-201ENSMUST00000223705 775 ntBASIC8.87□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms