Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Tnfsf4P43488 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Tnfsf4P43488 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Tnfsf4P43488 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Tnfsf4P43488 AC154642.2-201ENSMUST00000223657 2485 ntBASIC6.67□□□□□ -1.34
Tnfsf4P43488 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Tnfsf4P43488 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC6.67□□□□□ -1.34
Tnfsf4P43488 Dnase1-202ENSMUST00000120009 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Tnfsf4P43488 Gm11383-201ENSMUST00000121346 807 ntBASIC6.67□□□□□ -1.34
Tnfsf4P43488 Gm5809-201ENSMUST00000121854 529 ntBASIC6.67□□□□□ -1.34
Tnfsf4P43488 Mir1907-201ENSMUST00000122509 90 ntBASIC6.67□□□□□ -1.34
Tnfsf4P43488 Gm24782-201ENSMUST00000157641 132 ntBASIC6.67□□□□□ -1.34
Tnfsf4P43488 Clec2i-204ENSMUST00000160867 933 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Tnfsf4P43488 Clec2i-205ENSMUST00000162666 1091 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Tnfsf4P43488 Gm17217-201ENSMUST00000166613 469 ntBASIC6.67□□□□□ -1.34
Tnfsf4P43488 Gm6061-201ENSMUST00000175860 492 ntBASIC6.67□□□□□ -1.34
Tnfsf4P43488 Gm5261-201ENSMUST00000185860 713 ntBASIC6.67□□□□□ -1.34
Tnfsf4P43488 Gm28665-201ENSMUST00000189269 670 ntBASIC6.67□□□□□ -1.34
Tnfsf4P43488 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Tnfsf4P43488 C920008G01Rik-201ENSMUST00000196756 380 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Tnfsf4P43488 Gm43387-201ENSMUST00000196896 1066 ntBASIC6.67□□□□□ -1.34
Tnfsf4P43488 A330076H08Rik-203ENSMUST00000208822 1164 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Tnfsf4P43488 Gm7394-201ENSMUST00000209138 1032 ntBASIC6.67□□□□□ -1.34
Tnfsf4P43488 AC159462.2-201ENSMUST00000217559 463 ntTSL 5 BASIC6.67□□□□□ -1.34
Tnfsf4P43488 Gm6993-201ENSMUST00000219110 210 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Tnfsf4P43488 AC124715.1-201ENSMUST00000228480 754 ntBASIC6.67□□□□□ -1.34
Tnfsf4P43488 Clec2i-201ENSMUST00000032519 1014 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
Tnfsf4P43488 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Tnfsf4P43488 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC6.67□□□□□ -1.34
Tnfsf4P43488 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Tnfsf4P43488 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Tnfsf4P43488 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Tnfsf4P43488 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Tnfsf4P43488 AC107763.1-202ENSMUST00000225021 2663 ntBASIC6.67□□□□□ -1.34
Tnfsf4P43488 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Tnfsf4P43488 AC117608.1-201ENSMUST00000225500 3418 ntBASIC6.67□□□□□ -1.34
Tnfsf4P43488 AC107742.1-201ENSMUST00000227769 1390 ntBASIC6.67□□□□□ -1.34
Tnfsf4P43488 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC6.67□□□□□ -1.34
Tnfsf4P43488 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC6.67□□□□□ -1.34
Tnfsf4P43488 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Tnfsf4P43488 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Tnfsf4P43488 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Tnfsf4P43488 Dus4l-201ENSMUST00000020977 1773 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Tnfsf4P43488 Gm43953-201ENSMUST00000203709 2867 ntBASIC6.67□□□□□ -1.34
Tnfsf4P43488 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC6.67□□□□□ -1.34
Tnfsf4P43488 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Tnfsf4P43488 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC6.66□□□□□ -1.34
Tnfsf4P43488 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Tnfsf4P43488 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Tnfsf4P43488 AC162301.1-201ENSMUST00000228785 1542 ntBASIC6.66□□□□□ -1.34
Tnfsf4P43488 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Tnfsf4P43488 Gm43187-201ENSMUST00000200652 2397 ntBASIC6.66□□□□□ -1.34
Tnfsf4P43488 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC6.66□□□□□ -1.34
Tnfsf4P43488 Vmn2r45-201ENSMUST00000164845 3619 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Tnfsf4P43488 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Tnfsf4P43488 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Tnfsf4P43488 Gm9894-201ENSMUST00000171257 2904 ntBASIC6.66□□□□□ -1.34
Tnfsf4P43488 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Tnfsf4P43488 Gm22470-201ENSMUST00000104117 130 ntBASIC6.66□□□□□ -1.34
Tnfsf4P43488 n-R5s9-201ENSMUST00000104432 117 ntBASIC6.66□□□□□ -1.34
Tnfsf4P43488 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Tnfsf4P43488 Gm13196-201ENSMUST00000118297 379 ntBASIC6.66□□□□□ -1.34
Tnfsf4P43488 Gm4911-201ENSMUST00000119388 945 ntBASIC6.66□□□□□ -1.34
Tnfsf4P43488 Gm8916-201ENSMUST00000119732 949 ntBASIC6.66□□□□□ -1.34
Tnfsf4P43488 Gm11796-201ENSMUST00000120208 972 ntBASIC6.66□□□□□ -1.34
Tnfsf4P43488 Sh3d2c-ps1-201ENSMUST00000121498 904 ntBASIC6.66□□□□□ -1.34
Tnfsf4P43488 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC6.66□□□□□ -1.34
Tnfsf4P43488 Gm23031-201ENSMUST00000157998 119 ntBASIC6.66□□□□□ -1.34
Tnfsf4P43488 Gm22948-201ENSMUST00000158561 243 ntBASIC6.66□□□□□ -1.34
Tnfsf4P43488 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC6.66□□□□□ -1.34
Tnfsf4P43488 Mir1231-201ENSMUST00000175639 81 ntBASIC6.66□□□□□ -1.34
Tnfsf4P43488 Hist2h2bb-201ENSMUST00000177113 381 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Tnfsf4P43488 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC6.66□□□□□ -1.34
Tnfsf4P43488 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC6.66□□□□□ -1.34
Tnfsf4P43488 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC6.66□□□□□ -1.34
Tnfsf4P43488 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC6.66□□□□□ -1.34
Tnfsf4P43488 1700039M15Rik-201ENSMUST00000195377 1120 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Tnfsf4P43488 Gm17833-201ENSMUST00000197629 1065 ntBASIC6.66□□□□□ -1.34
Tnfsf4P43488 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
Tnfsf4P43488 Gm18484-201ENSMUST00000204389 991 ntBASIC6.66□□□□□ -1.34
Tnfsf4P43488 Gm44111-201ENSMUST00000204649 399 ntBASIC6.66□□□□□ -1.34
Tnfsf4P43488 Rps25-205ENSMUST00000216867 577 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Tnfsf4P43488 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Tnfsf4P43488 AC127224.1-201ENSMUST00000218094 453 ntBASIC6.66□□□□□ -1.34
Tnfsf4P43488 CT009718.2-202ENSMUST00000222092 704 ntTSL 2 BASIC6.66□□□□□ -1.34
Tnfsf4P43488 AC157650.2-201ENSMUST00000224666 328 ntBASIC6.66□□□□□ -1.34
Tnfsf4P43488 Olfr1322-201ENSMUST00000070304 933 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Tnfsf4P43488 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Tnfsf4P43488 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Tnfsf4P43488 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Tnfsf4P43488 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Tnfsf4P43488 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC6.66□□□□□ -1.34
Tnfsf4P43488 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Tnfsf4P43488 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC6.66□□□□□ -1.34
Tnfsf4P43488 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC6.66□□□□□ -1.34
Tnfsf4P43488 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Tnfsf4P43488 Gm5361-201ENSMUST00000211041 1498 ntBASIC6.66□□□□□ -1.34
Tnfsf4P43488 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Tnfsf4P43488 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Tnfsf4P43488 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms