Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
HttP42859 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
HttP42859 Gm14220-201ENSMUST00000118114 449 ntBASIC7.14□□□□□ -1.27
HttP42859 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC7.14□□□□□ -1.27
HttP42859 Gm25013-201ENSMUST00000158402 128 ntBASIC7.14□□□□□ -1.27
HttP42859 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
HttP42859 Mir6417-201ENSMUST00000183815 116 ntBASIC7.14□□□□□ -1.27
HttP42859 Gm27225-201ENSMUST00000183833 557 ntBASIC7.14□□□□□ -1.27
HttP42859 Gm7832-201ENSMUST00000202613 880 ntBASIC7.14□□□□□ -1.27
HttP42859 Gm45196-201ENSMUST00000206751 825 ntBASIC7.14□□□□□ -1.27
HttP42859 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
HttP42859 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC7.14□□□□□ -1.27
HttP42859 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
HttP42859 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC7.14□□□□□ -1.27
HttP42859 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC7.14□□□□□ -1.27
HttP42859 Gm11853-201ENSMUST00000119687 1384 ntBASIC7.14□□□□□ -1.27
HttP42859 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
HttP42859 C8a-203ENSMUST00000106808 3539 ntTSL 2 BASIC7.14□□□□□ -1.27
HttP42859 Gm44021-201ENSMUST00000203055 3516 ntBASIC7.14□□□□□ -1.27
HttP42859 Rbm12-201ENSMUST00000059647 6667 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
HttP42859 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
HttP42859 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
HttP42859 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
HttP42859 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
HttP42859 Gm22426-201ENSMUST00000103811 96 ntBASIC7.14□□□□□ -1.27
HttP42859 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
HttP42859 Gm3715-201ENSMUST00000172308 617 ntBASIC7.14□□□□□ -1.27
HttP42859 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC7.14□□□□□ -1.27
HttP42859 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
HttP42859 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC7.14□□□□□ -1.27
HttP42859 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC7.14□□□□□ -1.27
HttP42859 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
HttP42859 Gm20302-201ENSMUST00000080671 275 ntBASIC7.14□□□□□ -1.27
HttP42859 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
HttP42859 Ncor1-202ENSMUST00000037575 4246 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
HttP42859 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
HttP42859 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC7.14□□□□□ -1.27
HttP42859 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
HttP42859 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
HttP42859 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC7.14□□□□□ -1.27
HttP42859 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
HttP42859 Gm36527-201ENSMUST00000195500 3029 ntBASIC7.14□□□□□ -1.27
HttP42859 Olfr97-203ENSMUST00000213328 2168 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
HttP42859 Gm42572-201ENSMUST00000202292 3378 ntBASIC7.14□□□□□ -1.27
HttP42859 Gm22103-201ENSMUST00000116733 121 ntBASIC7.14□□□□□ -1.27
HttP42859 Gm26475-201ENSMUST00000116769 121 ntBASIC7.14□□□□□ -1.27
HttP42859 Gm23620-201ENSMUST00000116812 121 ntBASIC7.14□□□□□ -1.27
HttP42859 Gm25042-201ENSMUST00000116856 121 ntBASIC7.14□□□□□ -1.27
HttP42859 Gm25540-201ENSMUST00000116880 121 ntBASIC7.14□□□□□ -1.27
HttP42859 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
HttP42859 Gm13245-201ENSMUST00000119646 260 ntBASIC7.14□□□□□ -1.27
HttP42859 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
HttP42859 Gm23550-201ENSMUST00000179003 121 ntBASIC7.14□□□□□ -1.27
HttP42859 Gm25123-201ENSMUST00000179154 121 ntBASIC7.14□□□□□ -1.27
HttP42859 Gm25353-201ENSMUST00000179366 121 ntBASIC7.14□□□□□ -1.27
HttP42859 Gm22992-201ENSMUST00000179496 121 ntBASIC7.14□□□□□ -1.27
HttP42859 Gm25892-201ENSMUST00000179867 121 ntBASIC7.14□□□□□ -1.27
HttP42859 Gm24092-201ENSMUST00000180257 121 ntBASIC7.14□□□□□ -1.27
HttP42859 Gm6631-201ENSMUST00000193699 559 ntBASIC7.14□□□□□ -1.27
HttP42859 Gm44251-201ENSMUST00000204963 442 ntBASIC7.14□□□□□ -1.27
HttP42859 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
HttP42859 CT025616.1-201ENSMUST00000221158 412 ntBASIC7.14□□□□□ -1.27
HttP42859 Nlrp3-201ENSMUST00000079476 3933 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
HttP42859 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC7.14□□□□□ -1.27
HttP42859 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
HttP42859 Odf2-202ENSMUST00000046571 3959 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
HttP42859 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HttP42859 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
HttP42859 Grik2-205ENSMUST00000218598 3245 ntTSL 5 BASIC7.13□□□□□ -1.27
HttP42859 Fbxw7-202ENSMUST00000107675 3599 ntAPPRIS ALT1 TSL 5 BASIC7.13□□□□□ -1.27
HttP42859 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC7.13□□□□□ -1.27
HttP42859 Slco2b1-201ENSMUST00000032985 4381 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
HttP42859 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC7.13□□□□□ -1.27
HttP42859 Gm15149-201ENSMUST00000119370 360 ntBASIC7.13□□□□□ -1.27
HttP42859 Gm13007-201ENSMUST00000121866 365 ntBASIC7.13□□□□□ -1.27
HttP42859 Gm16060-201ENSMUST00000153140 478 ntBASIC7.13□□□□□ -1.27
HttP42859 Gm22895-201ENSMUST00000157508 308 ntBASIC7.13□□□□□ -1.27
HttP42859 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC7.13□□□□□ -1.27
HttP42859 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC7.13□□□□□ -1.27
HttP42859 Gm37784-201ENSMUST00000193233 189 ntBASIC7.13□□□□□ -1.27
HttP42859 Trim16-201ENSMUST00000055006 3906 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HttP42859 Luzp1-207ENSMUST00000170102 7526 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
HttP42859 Gm15097-201ENSMUST00000101180 2029 ntAPPRIS P2 TSL 5 BASIC7.13□□□□□ -1.27
HttP42859 Gm15080-201ENSMUST00000112804 2029 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HttP42859 Celf5-202ENSMUST00000119060 4166 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HttP42859 Bcl2l11-202ENSMUST00000089634 2301 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HttP42859 Patl2-201ENSMUST00000028665 2434 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HttP42859 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
HttP42859 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
HttP42859 Gbp7-202ENSMUST00000171263 2497 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HttP42859 Wdr44-202ENSMUST00000101670 4002 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HttP42859 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HttP42859 Gm7146-201ENSMUST00000116079 739 ntBASIC7.13□□□□□ -1.27
HttP42859 Gm13579-201ENSMUST00000118519 517 ntBASIC7.13□□□□□ -1.27
HttP42859 Gm21392-201ENSMUST00000182950 972 ntBASIC7.13□□□□□ -1.27
HttP42859 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HttP42859 Ighv5-21-201ENSMUST00000191935 295 ntBASIC7.13□□□□□ -1.27
HttP42859 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
HttP42859 Gm6477-201ENSMUST00000217098 764 ntBASIC7.13□□□□□ -1.27
HttP42859 AC154806.5-205ENSMUST00000228828 411 ntBASIC7.13□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms