Protein–RNA interactions for Protein: P33215

Nedd1, Protein NEDD1, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd1P33215 Akap2-205ENSMUST00000102903 6650 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Nedd1P33215 Vmn1r16-202ENSMUST00000227283 5813 ntAPPRIS P2 BASIC8.59□□□□□ -1.03
Nedd1P33215 A530017D24Rik-201ENSMUST00000101077 2315 ntTSL 5 BASIC8.59□□□□□ -1.03
Nedd1P33215 Tcf4-207ENSMUST00000114985 8577 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Nedd1P33215 Gm46123-201ENSMUST00000217447 6424 ntTSL 5 BASIC8.59□□□□□ -1.03
Nedd1P33215 Gm18908-201ENSMUST00000207125 1483 ntBASIC8.59□□□□□ -1.03
Nedd1P33215 Gm7086-201ENSMUST00000219083 1482 ntTSL 5 BASIC8.59□□□□□ -1.03
Nedd1P33215 Gm38155-201ENSMUST00000192285 2763 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Nedd1P33215 E030022I16Rik-201ENSMUST00000215131 2766 ntBASIC8.59□□□□□ -1.03
Nedd1P33215 Gm29617-206ENSMUST00000187759 1600 ntTSL 5 BASIC8.59□□□□□ -1.03
Nedd1P33215 Gm28749-205ENSMUST00000187886 1600 ntTSL 3 BASIC8.59□□□□□ -1.03
Nedd1P33215 Gm29000-208ENSMUST00000190932 1600 ntTSL 3 BASIC8.59□□□□□ -1.03
Nedd1P33215 9030607J07Rik-201ENSMUST00000202228 1622 ntBASIC8.59□□□□□ -1.03
Nedd1P33215 Ppp2r3c-201ENSMUST00000021410 4216 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Nedd1P33215 Cdk1-201ENSMUST00000020099 4375 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Nedd1P33215 Mtif2-201ENSMUST00000020749 2425 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Nedd1P33215 Vmn1r37-205ENSMUST00000227923 1773 ntAPPRIS P2 BASIC8.59□□□□□ -1.03
Nedd1P33215 Pum1-203ENSMUST00000097864 4017 ntAPPRIS ALT1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Nedd1P33215 Myt1-203ENSMUST00000108757 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Nedd1P33215 Gm22426-201ENSMUST00000103811 96 ntBASIC8.59□□□□□ -1.03
Nedd1P33215 Gm25773-201ENSMUST00000116718 127 ntBASIC8.59□□□□□ -1.03
Nedd1P33215 Gm15185-201ENSMUST00000117397 746 ntBASIC8.59□□□□□ -1.03
Nedd1P33215 Gm5759-201ENSMUST00000119203 811 ntBASIC8.59□□□□□ -1.03
Nedd1P33215 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC8.59□□□□□ -1.03
Nedd1P33215 Gm15507-203ENSMUST00000140958 658 ntTSL 3 BASIC8.59□□□□□ -1.03
Nedd1P33215 Gm14319-201ENSMUST00000142937 703 ntTSL 2 BASIC8.59□□□□□ -1.03
Nedd1P33215 Gm14009-201ENSMUST00000152439 656 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Nedd1P33215 Gm9286-201ENSMUST00000173586 508 ntBASIC8.59□□□□□ -1.03
Nedd1P33215 Gm24824-201ENSMUST00000175097 78 ntBASIC8.59□□□□□ -1.03
Nedd1P33215 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC8.59□□□□□ -1.03
Nedd1P33215 Gm28894-201ENSMUST00000185214 615 ntBASIC8.59□□□□□ -1.03
Nedd1P33215 2010308F09Rik-202ENSMUST00000186931 578 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Nedd1P33215 Gm28661-201ENSMUST00000188231 681 ntBASIC8.59□□□□□ -1.03
Nedd1P33215 Trbv28-201ENSMUST00000192804 264 ntBASIC8.59□□□□□ -1.03
Nedd1P33215 Gm37369-201ENSMUST00000194179 615 ntBASIC8.59□□□□□ -1.03
Nedd1P33215 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC8.59□□□□□ -1.03
Nedd1P33215 Gm43810-201ENSMUST00000201018 232 ntBASIC8.59□□□□□ -1.03
Nedd1P33215 Gm43232-201ENSMUST00000201346 364 ntBASIC8.59□□□□□ -1.03
Nedd1P33215 Gm45008-201ENSMUST00000206420 493 ntBASIC8.59□□□□□ -1.03
Nedd1P33215 5930435M05Rik-202ENSMUST00000207936 414 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Nedd1P33215 Gm4972-201ENSMUST00000211108 1254 ntBASIC8.59□□□□□ -1.03
Nedd1P33215 Gm45900-201ENSMUST00000211879 409 ntBASIC8.59□□□□□ -1.03
Nedd1P33215 Gm5176-201ENSMUST00000218244 1227 ntBASIC8.59□□□□□ -1.03
Nedd1P33215 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC8.59□□□□□ -1.03
Nedd1P33215 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC8.59□□□□□ -1.03
Nedd1P33215 AC139941.1-201ENSMUST00000221517 478 ntBASIC8.59□□□□□ -1.03
Nedd1P33215 AC156790.3-201ENSMUST00000226200 254 ntBASIC8.59□□□□□ -1.03
Nedd1P33215 AC161877.2-201ENSMUST00000226248 545 ntBASIC8.59□□□□□ -1.03
Nedd1P33215 AC154738.1-201ENSMUST00000227054 368 ntBASIC8.59□□□□□ -1.03
Nedd1P33215 AC102603.1-201ENSMUST00000227481 584 ntBASIC8.59□□□□□ -1.03
Nedd1P33215 Il1f6-201ENSMUST00000028361 883 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Nedd1P33215 Gm20302-201ENSMUST00000080671 275 ntBASIC8.59□□□□□ -1.03
Nedd1P33215 Gm24613-201ENSMUST00000083266 130 ntBASIC8.59□□□□□ -1.03
Nedd1P33215 Ttll4-201ENSMUST00000042125 10019 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Nedd1P33215 Vmn1r50-203ENSMUST00000226577 2240 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Nedd1P33215 Gm16072-201ENSMUST00000119574 2377 ntBASIC8.59□□□□□ -1.03
Nedd1P33215 Slc43a2-211ENSMUST00000169547 7145 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Nedd1P33215 Zfp825-202ENSMUST00000202645 1406 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Nedd1P33215 Ctxn3-201ENSMUST00000091892 1441 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Nedd1P33215 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Nedd1P33215 Trappc13-201ENSMUST00000022224 2342 ntAPPRIS P4 TSL 1 (best) BASIC8.59□□□□□ -1.03
Nedd1P33215 Arl15-201ENSMUST00000091201 3364 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Nedd1P33215 Zfp652-202ENSMUST00000107717 10433 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Nedd1P33215 Prepl-202ENSMUST00000171795 3830 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Nedd1P33215 Virma-201ENSMUST00000055372 3954 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Nedd1P33215 1700031F05Rik-201ENSMUST00000048061 1361 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Nedd1P33215 Rai14-207ENSMUST00000227506 4732 ntAPPRIS ALT2 BASIC8.59□□□□□ -1.03
Nedd1P33215 Gm44581-201ENSMUST00000206227 1693 ntTSL 5 BASIC8.59□□□□□ -1.03
Nedd1P33215 Sipa1l1-201ENSMUST00000053969 7488 ntAPPRIS P3 TSL 5 BASIC8.58□□□□□ -1.04
Nedd1P33215 Ttc38-203ENSMUST00000146088 3749 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Nedd1P33215 Ncald-203ENSMUST00000119730 3295 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Nedd1P33215 A430110L20Rik-202ENSMUST00000181680 2513 ntBASIC8.58□□□□□ -1.04
Nedd1P33215 Gm28240-201ENSMUST00000187560 2053 ntBASIC8.58□□□□□ -1.04
Nedd1P33215 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Nedd1P33215 AI182371-207ENSMUST00000226972 1642 ntAPPRIS ALT2 BASIC8.58□□□□□ -1.04
Nedd1P33215 Cts7-203ENSMUST00000224986 1349 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Nedd1P33215 Atp6v0a1-202ENSMUST00000092663 3813 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Nedd1P33215 Sorbs2-215ENSMUST00000135336 6307 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Nedd1P33215 Gm16204-201ENSMUST00000117864 1897 ntBASIC8.58□□□□□ -1.04
Nedd1P33215 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC8.58□□□□□ -1.04
Nedd1P33215 AC159886.2-201ENSMUST00000214737 2740 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Nedd1P33215 Gm10778-202ENSMUST00000189672 4735 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Nedd1P33215 Gm42546-201ENSMUST00000201584 2592 ntBASIC8.58□□□□□ -1.04
Nedd1P33215 AL589871.1-201ENSMUST00000221299 3561 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Nedd1P33215 Arhgap12-212ENSMUST00000182559 4265 ntAPPRIS P4 TSL 1 (best) BASIC8.58□□□□□ -1.04
Nedd1P33215 Gm10376-201ENSMUST00000100694 555 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Nedd1P33215 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC8.58□□□□□ -1.04
Nedd1P33215 Gm17132-201ENSMUST00000109542 1158 ntBASIC8.58□□□□□ -1.04
Nedd1P33215 Fate1-202ENSMUST00000114569 1053 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Nedd1P33215 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC8.58□□□□□ -1.04
Nedd1P33215 Gm11810-201ENSMUST00000118311 333 ntBASIC8.58□□□□□ -1.04
Nedd1P33215 Gm12401-201ENSMUST00000118435 228 ntBASIC8.58□□□□□ -1.04
Nedd1P33215 Gm12525-201ENSMUST00000125412 554 ntTSL 2 BASIC8.58□□□□□ -1.04
Nedd1P33215 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC8.58□□□□□ -1.04
Nedd1P33215 Plxna4os3-202ENSMUST00000143328 277 ntTSL 3 BASIC8.58□□□□□ -1.04
Nedd1P33215 Gm12868-201ENSMUST00000143801 417 ntTSL 3 BASIC8.58□□□□□ -1.04
Nedd1P33215 4930599N23Rik-201ENSMUST00000146981 880 ntTSL 2 BASIC8.58□□□□□ -1.04
Nedd1P33215 Gm25271-201ENSMUST00000157273 290 ntBASIC8.58□□□□□ -1.04
Nedd1P33215 Gm24211-201ENSMUST00000158264 107 ntBASIC8.58□□□□□ -1.04
Nedd1P33215 Clec2i-204ENSMUST00000160867 933 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms