Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC6.99□□□□□ -1.29
BdnfP21237 Gm29555-201ENSMUST00000188620 1497 ntTSL 5 BASIC6.99□□□□□ -1.29
BdnfP21237 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC6.99□□□□□ -1.29
BdnfP21237 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC6.99□□□□□ -1.29
BdnfP21237 AC164437.5-201ENSMUST00000227235 4414 ntBASIC6.99□□□□□ -1.29
BdnfP21237 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
BdnfP21237 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
BdnfP21237 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC6.99□□□□□ -1.29
BdnfP21237 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
BdnfP21237 Gm37347-201ENSMUST00000193969 3071 ntBASIC6.99□□□□□ -1.29
BdnfP21237 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
BdnfP21237 Rps27a-201ENSMUST00000102844 637 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
BdnfP21237 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
BdnfP21237 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
BdnfP21237 Lair1-204ENSMUST00000108600 742 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
BdnfP21237 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC6.99□□□□□ -1.29
BdnfP21237 Mobp-203ENSMUST00000111627 481 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
BdnfP21237 Vps29-202ENSMUST00000117868 720 ntTSL 2 BASIC6.99□□□□□ -1.29
BdnfP21237 Gm15000-201ENSMUST00000118275 1243 ntBASIC6.99□□□□□ -1.29
BdnfP21237 Gm12710-201ENSMUST00000119011 216 ntBASIC6.99□□□□□ -1.29
BdnfP21237 Gm11203-201ENSMUST00000122169 741 ntBASIC6.99□□□□□ -1.29
BdnfP21237 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
BdnfP21237 Gm12243-201ENSMUST00000128521 821 ntTSL 3 BASIC6.99□□□□□ -1.29
BdnfP21237 Klra13-ps-202ENSMUST00000144414 769 ntTSL 5 BASIC6.99□□□□□ -1.29
BdnfP21237 4933427D06Rik-202ENSMUST00000153517 522 ntTSL 5 BASIC6.99□□□□□ -1.29
BdnfP21237 Gm23007-201ENSMUST00000158951 177 ntBASIC6.99□□□□□ -1.29
BdnfP21237 Rpl29-ps1-201ENSMUST00000161849 508 ntBASIC6.99□□□□□ -1.29
BdnfP21237 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
BdnfP21237 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
BdnfP21237 4930426I24Rik-201ENSMUST00000180709 601 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
BdnfP21237 Mir6239-201ENSMUST00000183564 105 ntBASIC6.99□□□□□ -1.29
BdnfP21237 Mir6415-201ENSMUST00000184064 100 ntBASIC6.99□□□□□ -1.29
BdnfP21237 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
BdnfP21237 Gm20918-202ENSMUST00000188637 1227 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
BdnfP21237 Mrgprc3-ps-201ENSMUST00000189876 955 ntBASIC6.99□□□□□ -1.29
BdnfP21237 Gm38203-201ENSMUST00000191815 245 ntBASIC6.99□□□□□ -1.29
BdnfP21237 Gm37825-201ENSMUST00000193141 904 ntTSL 5 BASIC6.99□□□□□ -1.29
BdnfP21237 Gm35108-201ENSMUST00000194321 699 ntBASIC6.99□□□□□ -1.29
BdnfP21237 Gm33191-201ENSMUST00000195604 699 ntBASIC6.99□□□□□ -1.29
BdnfP21237 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC6.99□□□□□ -1.29
BdnfP21237 Gm42161-201ENSMUST00000196278 726 ntTSL 5 BASIC6.99□□□□□ -1.29
BdnfP21237 Gm3321-201ENSMUST00000200603 1129 ntBASIC6.99□□□□□ -1.29
BdnfP21237 Gm44603-201ENSMUST00000206820 367 ntBASIC6.99□□□□□ -1.29
BdnfP21237 Gm4972-201ENSMUST00000211108 1254 ntBASIC6.99□□□□□ -1.29
BdnfP21237 4930555F03Rik-205ENSMUST00000212179 1257 ntTSL 5 BASIC6.99□□□□□ -1.29
BdnfP21237 Gm2089-201ENSMUST00000218294 479 ntBASIC6.99□□□□□ -1.29
BdnfP21237 Gm33684-201ENSMUST00000221119 263 ntTSL 3 BASIC6.99□□□□□ -1.29
BdnfP21237 AC154785.1-201ENSMUST00000223280 572 ntBASIC6.99□□□□□ -1.29
BdnfP21237 AC118249.1-201ENSMUST00000224822 608 ntBASIC6.99□□□□□ -1.29
BdnfP21237 AC130673.1-201ENSMUST00000227992 435 ntBASIC6.99□□□□□ -1.29
BdnfP21237 Spink6-201ENSMUST00000068473 587 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
BdnfP21237 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
BdnfP21237 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
BdnfP21237 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
BdnfP21237 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
BdnfP21237 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC6.99□□□□□ -1.29
BdnfP21237 Slc17a3-202ENSMUST00000091698 1759 ntTSL 5 BASIC6.99□□□□□ -1.29
BdnfP21237 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
BdnfP21237 Gm37076-201ENSMUST00000192033 2294 ntBASIC6.99□□□□□ -1.29
BdnfP21237 Gm39465-201ENSMUST00000213810 9813 ntTSL 3 BASIC6.99□□□□□ -1.29
BdnfP21237 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC6.99□□□□□ -1.29
BdnfP21237 4933406G16Rik-201ENSMUST00000144854 1415 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
BdnfP21237 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
BdnfP21237 Gm42577-201ENSMUST00000201367 3211 ntBASIC6.99□□□□□ -1.29
BdnfP21237 Gm12021-201ENSMUST00000121061 1746 ntBASIC6.98□□□□□ -1.29
BdnfP21237 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC6.98□□□□□ -1.29
BdnfP21237 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
BdnfP21237 Gm21036-201ENSMUST00000207544 2611 ntBASIC6.98□□□□□ -1.29
BdnfP21237 Gm14035-201ENSMUST00000117596 1475 ntBASIC6.98□□□□□ -1.29
BdnfP21237 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
BdnfP21237 Zfp846-202ENSMUST00000115557 12974 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
BdnfP21237 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
BdnfP21237 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
BdnfP21237 Wdr19-201ENSMUST00000041892 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
BdnfP21237 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
BdnfP21237 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
BdnfP21237 8430437L04Rik-201ENSMUST00000124829 1663 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
BdnfP21237 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
BdnfP21237 Mup1-202ENSMUST00000103012 927 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
BdnfP21237 Gm22438-201ENSMUST00000104049 132 ntBASIC6.98□□□□□ -1.29
BdnfP21237 Gm24071-201ENSMUST00000104520 132 ntBASIC6.98□□□□□ -1.29
BdnfP21237 Lrrc51-206ENSMUST00000106966 821 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
BdnfP21237 Mup16-202ENSMUST00000107483 927 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
BdnfP21237 Mup17-201ENSMUST00000107484 927 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
BdnfP21237 Prh1-202ENSMUST00000111972 870 ntAPPRIS P2 TSL 5 BASIC6.98□□□□□ -1.29
BdnfP21237 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
BdnfP21237 Gm13858-201ENSMUST00000118862 671 ntBASIC6.98□□□□□ -1.29
BdnfP21237 Gm12593-201ENSMUST00000120981 743 ntBASIC6.98□□□□□ -1.29
BdnfP21237 Gm5270-201ENSMUST00000121506 1002 ntBASIC6.98□□□□□ -1.29
BdnfP21237 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC6.98□□□□□ -1.29
BdnfP21237 Gm25845-201ENSMUST00000122588 310 ntBASIC6.98□□□□□ -1.29
BdnfP21237 Gm11491-201ENSMUST00000129441 1118 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
BdnfP21237 Gm15668-201ENSMUST00000140506 678 ntTSL 3 BASIC6.98□□□□□ -1.29
BdnfP21237 Gm14024-201ENSMUST00000141964 560 ntTSL 2 BASIC6.98□□□□□ -1.29
BdnfP21237 Gm11948-201ENSMUST00000142322 539 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
BdnfP21237 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
BdnfP21237 Gm7281-201ENSMUST00000160010 543 ntBASIC6.98□□□□□ -1.29
BdnfP21237 Gm4340-201ENSMUST00000163113 807 ntAPPRIS ALT2 BASIC6.98□□□□□ -1.29
BdnfP21237 Gm17223-201ENSMUST00000171413 481 ntBASIC6.98□□□□□ -1.29
BdnfP21237 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms