Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC5.62□□□□□ -1.51
Sdc1P18828 Gm28124-202ENSMUST00000191099 1498 ntTSL 5 BASIC5.62□□□□□ -1.51
Sdc1P18828 Gm29217-202ENSMUST00000191270 1498 ntTSL 5 BASIC5.62□□□□□ -1.51
Sdc1P18828 Gm28332-203ENSMUST00000191389 1498 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Sdc1P18828 Gm37346-201ENSMUST00000191665 1498 ntTSL 5 BASIC5.62□□□□□ -1.51
Sdc1P18828 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC5.62□□□□□ -1.51
Sdc1P18828 Gm38371-202ENSMUST00000193996 1498 ntTSL 5 BASIC5.62□□□□□ -1.51
Sdc1P18828 Gm37434-203ENSMUST00000194239 1498 ntTSL 5 BASIC5.62□□□□□ -1.51
Sdc1P18828 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC5.62□□□□□ -1.51
Sdc1P18828 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC5.62□□□□□ -1.51
Sdc1P18828 Gm37071-203ENSMUST00000195814 1498 ntTSL 5 BASIC5.62□□□□□ -1.51
Sdc1P18828 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Sdc1P18828 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC5.62□□□□□ -1.51
Sdc1P18828 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Sdc1P18828 8430437L04Rik-201ENSMUST00000124829 1663 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Sdc1P18828 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Sdc1P18828 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
Sdc1P18828 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sdc1P18828 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC5.62□□□□□ -1.51
Sdc1P18828 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Sdc1P18828 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sdc1P18828 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC5.61□□□□□ -1.51
Sdc1P18828 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC5.61□□□□□ -1.51
Sdc1P18828 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Sdc1P18828 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Sdc1P18828 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sdc1P18828 Gm26146-201ENSMUST00000104478 185 ntBASIC5.61□□□□□ -1.51
Sdc1P18828 Gstm7-203ENSMUST00000106688 783 ntTSL 2 BASIC5.61□□□□□ -1.51
Sdc1P18828 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Sdc1P18828 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
Sdc1P18828 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sdc1P18828 Gm6743-201ENSMUST00000117345 1066 ntBASIC5.61□□□□□ -1.51
Sdc1P18828 Gm13929-201ENSMUST00000117553 1125 ntBASIC5.61□□□□□ -1.51
Sdc1P18828 Gm15203-201ENSMUST00000117668 455 ntBASIC5.61□□□□□ -1.51
Sdc1P18828 Gm6630-201ENSMUST00000119199 454 ntBASIC5.61□□□□□ -1.51
Sdc1P18828 Gm15712-201ENSMUST00000120369 1156 ntBASIC5.61□□□□□ -1.51
Sdc1P18828 Gm14048-201ENSMUST00000121864 1268 ntBASIC5.61□□□□□ -1.51
Sdc1P18828 Gm24597-201ENSMUST00000122503 300 ntBASIC5.61□□□□□ -1.51
Sdc1P18828 Rps12-ps9-201ENSMUST00000139165 399 ntBASIC5.61□□□□□ -1.51
Sdc1P18828 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC5.61□□□□□ -1.51
Sdc1P18828 Gm26048-201ENSMUST00000157305 142 ntBASIC5.61□□□□□ -1.51
Sdc1P18828 Gm26486-201ENSMUST00000158021 110 ntBASIC5.61□□□□□ -1.51
Sdc1P18828 Gm4868-201ENSMUST00000164138 789 ntBASIC5.61□□□□□ -1.51
Sdc1P18828 5730435O14Rik-202ENSMUST00000170047 617 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Sdc1P18828 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Sdc1P18828 Gm4246-201ENSMUST00000172822 216 ntBASIC5.61□□□□□ -1.51
Sdc1P18828 Cyp2c53-ps-201ENSMUST00000175649 897 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Sdc1P18828 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC5.61□□□□□ -1.51
Sdc1P18828 Trav9d-2-201ENSMUST00000178824 337 ntAPPRIS ALT2 BASIC5.61□□□□□ -1.51
Sdc1P18828 Trav9n-2-201ENSMUST00000180097 337 ntAPPRIS ALT2 BASIC5.61□□□□□ -1.51
Sdc1P18828 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Sdc1P18828 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Sdc1P18828 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC5.61□□□□□ -1.51
Sdc1P18828 Gm29041-201ENSMUST00000189199 380 ntBASIC5.61□□□□□ -1.51
Sdc1P18828 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC5.61□□□□□ -1.51
Sdc1P18828 Gm28644-201ENSMUST00000191364 585 ntTSL 2 BASIC5.61□□□□□ -1.51
Sdc1P18828 Gm38105-201ENSMUST00000192112 2621 ntBASIC5.61□□□□□ -1.51
Sdc1P18828 Gm37469-201ENSMUST00000193728 890 ntBASIC5.61□□□□□ -1.51
Sdc1P18828 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC5.61□□□□□ -1.51
Sdc1P18828 Gm44356-201ENSMUST00000196731 111 ntBASIC5.61□□□□□ -1.51
Sdc1P18828 Gm43647-201ENSMUST00000198142 486 ntTSL 5 BASIC5.61□□□□□ -1.51
Sdc1P18828 Gm43699-201ENSMUST00000201312 818 ntTSL 3 BASIC5.61□□□□□ -1.51
Sdc1P18828 Gm6375-201ENSMUST00000205201 1145 ntBASIC5.61□□□□□ -1.51
Sdc1P18828 Gm18537-202ENSMUST00000206215 1503 ntBASIC5.61□□□□□ -1.51
Sdc1P18828 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC5.61□□□□□ -1.51
Sdc1P18828 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC5.61□□□□□ -1.51
Sdc1P18828 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
Sdc1P18828 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Sdc1P18828 AC154646.1-201ENSMUST00000225011 1092 ntBASIC5.61□□□□□ -1.51
Sdc1P18828 AC122774.1-201ENSMUST00000227703 762 ntBASIC5.61□□□□□ -1.51
Sdc1P18828 AC125405.2-201ENSMUST00000227862 383 ntBASIC5.61□□□□□ -1.51
Sdc1P18828 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Sdc1P18828 AC162301.1-201ENSMUST00000228785 1542 ntBASIC5.61□□□□□ -1.51
Sdc1P18828 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sdc1P18828 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sdc1P18828 Rhox11-201ENSMUST00000054147 811 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sdc1P18828 Apol10a-201ENSMUST00000060551 3033 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sdc1P18828 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sdc1P18828 Tatdn3-202ENSMUST00000085633 1089 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Sdc1P18828 Vmn1r42-201ENSMUST00000089419 1098 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Sdc1P18828 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Sdc1P18828 Car1-201ENSMUST00000094365 1180 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sdc1P18828 Gm16410-201ENSMUST00000094550 774 ntBASIC5.61□□□□□ -1.51
Sdc1P18828 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sdc1P18828 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Sdc1P18828 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Sdc1P18828 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Sdc1P18828 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC5.61□□□□□ -1.51
Sdc1P18828 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Sdc1P18828 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sdc1P18828 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sdc1P18828 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC5.61□□□□□ -1.51
Sdc1P18828 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
Sdc1P18828 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
Sdc1P18828 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Sdc1P18828 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Sdc1P18828 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Sdc1P18828 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Sdc1P18828 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Sdc1P18828 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms