Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hmgn1P18608 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Hmgn1P18608 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC6.29□□□□□ -1.4
Hmgn1P18608 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC6.29□□□□□ -1.4
Hmgn1P18608 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hmgn1P18608 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Hmgn1P18608 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hmgn1P18608 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hmgn1P18608 Gm37967-201ENSMUST00000195634 2665 ntBASIC6.29□□□□□ -1.4
Hmgn1P18608 Gm10376-201ENSMUST00000100694 555 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Hmgn1P18608 Trbv1-201ENSMUST00000103262 417 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Hmgn1P18608 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Hmgn1P18608 Gm11833-201ENSMUST00000118393 853 ntBASIC6.29□□□□□ -1.4
Hmgn1P18608 Gm11558-201ENSMUST00000118454 459 ntBASIC6.29□□□□□ -1.4
Hmgn1P18608 Gm15665-201ENSMUST00000119116 847 ntBASIC6.29□□□□□ -1.4
Hmgn1P18608 Gm10639-201ENSMUST00000119823 993 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Hmgn1P18608 4930483K19Rik-201ENSMUST00000127576 1237 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Hmgn1P18608 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Hmgn1P18608 Rpl36-ps2-201ENSMUST00000136893 311 ntBASIC6.29□□□□□ -1.4
Hmgn1P18608 Gm11789-205ENSMUST00000148579 649 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Hmgn1P18608 Tvp23bos-201ENSMUST00000148598 1011 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Hmgn1P18608 Gm23497-201ENSMUST00000157738 130 ntBASIC6.29□□□□□ -1.4
Hmgn1P18608 Trav9d-4-201ENSMUST00000167409 307 ntAPPRIS ALT2 BASIC6.29□□□□□ -1.4
Hmgn1P18608 Gm7991-201ENSMUST00000168668 591 ntBASIC6.29□□□□□ -1.4
Hmgn1P18608 Gm6536-201ENSMUST00000171180 615 ntBASIC6.29□□□□□ -1.4
Hmgn1P18608 Gm20655-201ENSMUST00000176132 473 ntTSL 3 BASIC6.29□□□□□ -1.4
Hmgn1P18608 Gm20797-201ENSMUST00000177894 383 ntBASIC6.29□□□□□ -1.4
Hmgn1P18608 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hmgn1P18608 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Hmgn1P18608 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC6.29□□□□□ -1.4
Hmgn1P18608 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Hmgn1P18608 Gm37729-201ENSMUST00000194761 1172 ntBASIC6.29□□□□□ -1.4
Hmgn1P18608 Gm38079-201ENSMUST00000195603 154 ntBASIC6.29□□□□□ -1.4
Hmgn1P18608 Gm24826-202ENSMUST00000197298 216 ntBASIC6.29□□□□□ -1.4
Hmgn1P18608 AC137678.1-201ENSMUST00000198370 118 ntBASIC6.29□□□□□ -1.4
Hmgn1P18608 Gm43750-201ENSMUST00000199027 2493 ntBASIC6.29□□□□□ -1.4
Hmgn1P18608 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
Hmgn1P18608 Mrpl22-201ENSMUST00000020820 722 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hmgn1P18608 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Hmgn1P18608 Gm45338-205ENSMUST00000210795 728 ntTSL 5 BASIC6.29□□□□□ -1.4
Hmgn1P18608 AC132954.2-201ENSMUST00000222400 403 ntBASIC6.29□□□□□ -1.4
Hmgn1P18608 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hmgn1P18608 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hmgn1P18608 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hmgn1P18608 Cldn10-202ENSMUST00000071546 1031 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Hmgn1P18608 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
Hmgn1P18608 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hmgn1P18608 Mbnl2-203ENSMUST00000226800 3328 ntBASIC6.29□□□□□ -1.4
Hmgn1P18608 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hmgn1P18608 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC6.29□□□□□ -1.4
Hmgn1P18608 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC6.29□□□□□ -1.4
Hmgn1P18608 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Hmgn1P18608 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Hmgn1P18608 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC6.29□□□□□ -1.4
Hmgn1P18608 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hmgn1P18608 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Hmgn1P18608 Gm19024-201ENSMUST00000194681 1319 ntBASIC6.28□□□□□ -1.4
Hmgn1P18608 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Hmgn1P18608 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Hmgn1P18608 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Hmgn1P18608 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Hmgn1P18608 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Hmgn1P18608 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Hmgn1P18608 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Hmgn1P18608 AC117608.1-201ENSMUST00000225500 3418 ntBASIC6.28□□□□□ -1.4
Hmgn1P18608 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC6.28□□□□□ -1.4
Hmgn1P18608 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC6.28□□□□□ -1.4
Hmgn1P18608 Wdr83os-202ENSMUST00000140621 630 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Hmgn1P18608 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Hmgn1P18608 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Hmgn1P18608 Esd-203ENSMUST00000175887 809 ntTSL 5 BASIC6.28□□□□□ -1.4
Hmgn1P18608 Mir378d-201ENSMUST00000184232 110 ntBASIC6.28□□□□□ -1.4
Hmgn1P18608 BC065403-202ENSMUST00000184796 1043 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Hmgn1P18608 Gm37669-201ENSMUST00000192184 820 ntBASIC6.28□□□□□ -1.4
Hmgn1P18608 Gm43539-201ENSMUST00000196190 363 ntTSL 3 BASIC6.28□□□□□ -1.4
Hmgn1P18608 Gm43160-201ENSMUST00000196453 421 ntBASIC6.28□□□□□ -1.4
Hmgn1P18608 Gm36448-201ENSMUST00000199916 438 ntBASIC6.28□□□□□ -1.4
Hmgn1P18608 Gm30708-201ENSMUST00000202183 312 ntBASIC6.28□□□□□ -1.4
Hmgn1P18608 Gm42883-201ENSMUST00000202594 222 ntBASIC6.28□□□□□ -1.4
Hmgn1P18608 Gm18655-201ENSMUST00000214802 1090 ntBASIC6.28□□□□□ -1.4
Hmgn1P18608 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC6.28□□□□□ -1.4
Hmgn1P18608 AC105167.1-201ENSMUST00000219966 253 ntTSL 5 BASIC6.28□□□□□ -1.4
Hmgn1P18608 AC187103.4-201ENSMUST00000225399 300 ntBASIC6.28□□□□□ -1.4
Hmgn1P18608 AC164436.1-201ENSMUST00000227074 772 ntBASIC6.28□□□□□ -1.4
Hmgn1P18608 AC125087.1-201ENSMUST00000227552 514 ntBASIC6.28□□□□□ -1.4
Hmgn1P18608 Gm5815-201ENSMUST00000050706 1185 ntBASIC6.28□□□□□ -1.4
Hmgn1P18608 Olfr1262-201ENSMUST00000061701 1024 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Hmgn1P18608 AC103672.2-201ENSMUST00000228146 1687 ntBASIC6.28□□□□□ -1.4
Hmgn1P18608 Gm43221-201ENSMUST00000197612 2071 ntBASIC6.28□□□□□ -1.4
Hmgn1P18608 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Hmgn1P18608 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Hmgn1P18608 CT010577.1-202ENSMUST00000226187 1903 ntBASIC6.28□□□□□ -1.4
Hmgn1P18608 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC6.28□□□□□ -1.4
Hmgn1P18608 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
Hmgn1P18608 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Hmgn1P18608 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
Hmgn1P18608 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Hmgn1P18608 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Hmgn1P18608 AC107763.1-202ENSMUST00000225021 2663 ntBASIC6.27□□□□□ -1.41
Hmgn1P18608 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 137.1 ms