Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm45408-201ENSMUST00000211080 390 ntTSL 5 BASIC5.78□□□□□ -1.48
Cdx1P18111 Gm45782-201ENSMUST00000212670 366 ntBASIC5.78□□□□□ -1.48
Cdx1P18111 Erh-204ENSMUST00000218364 665 ntTSL 3 BASIC5.78□□□□□ -1.48
Cdx1P18111 Gm33782-201ENSMUST00000218518 517 ntTSL 3 BASIC5.78□□□□□ -1.48
Cdx1P18111 Zp4-ps-201ENSMUST00000220980 1561 ntBASIC5.78□□□□□ -1.48
Cdx1P18111 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC5.78□□□□□ -1.48
Cdx1P18111 1700018F24Rik-201ENSMUST00000031624 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cdx1P18111 Gkn2-201ENSMUST00000032128 788 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cdx1P18111 Mphosph6-201ENSMUST00000034303 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cdx1P18111 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cdx1P18111 Gm25259-201ENSMUST00000083048 193 ntBASIC5.78□□□□□ -1.48
Cdx1P18111 B230118H07Rik-201ENSMUST00000090513 969 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cdx1P18111 Olfr665-201ENSMUST00000098165 951 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Cdx1P18111 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
Cdx1P18111 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cdx1P18111 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Cdx1P18111 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC5.78□□□□□ -1.48
Cdx1P18111 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cdx1P18111 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC5.78□□□□□ -1.48
Cdx1P18111 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Cdx1P18111 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Cdx1P18111 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Cdx1P18111 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cdx1P18111 Olfr101-202ENSMUST00000214376 2989 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Cdx1P18111 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Cdx1P18111 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC5.78□□□□□ -1.48
Cdx1P18111 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Cdx1P18111 A630001G21Rik-201ENSMUST00000064788 1353 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
Cdx1P18111 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cdx1P18111 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cdx1P18111 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cdx1P18111 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Cdx1P18111 Cast-207ENSMUST00000222588 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cdx1P18111 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cdx1P18111 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cdx1P18111 Igsf1-203ENSMUST00000114891 1761 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Cdx1P18111 Zscan4b-202ENSMUST00000210847 1779 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Cdx1P18111 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Cdx1P18111 AC152922.2-201ENSMUST00000213353 3879 ntBASIC5.77□□□□□ -1.49
Cdx1P18111 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Cdx1P18111 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Cdx1P18111 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Cdx1P18111 Gm43747-201ENSMUST00000201412 1330 ntBASIC5.77□□□□□ -1.49
Cdx1P18111 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Cdx1P18111 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Cdx1P18111 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Cdx1P18111 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC5.77□□□□□ -1.49
Cdx1P18111 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Cdx1P18111 BC147527-202ENSMUST00000225029 1595 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Cdx1P18111 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
Cdx1P18111 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Cdx1P18111 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC5.77□□□□□ -1.49
Cdx1P18111 Gm13106-201ENSMUST00000119045 1443 ntBASIC5.77□□□□□ -1.49
Cdx1P18111 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Cdx1P18111 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
Cdx1P18111 Gm38257-201ENSMUST00000195881 2761 ntBASIC5.77□□□□□ -1.49
Cdx1P18111 Gm43285-201ENSMUST00000196563 3592 ntBASIC5.77□□□□□ -1.49
Cdx1P18111 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Cdx1P18111 Gm14886-201ENSMUST00000117208 2629 ntBASIC5.77□□□□□ -1.49
Cdx1P18111 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Cdx1P18111 Igkv1-117-201ENSMUST00000103317 404 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Cdx1P18111 Igkv8-28-201ENSMUST00000103380 305 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Cdx1P18111 Pex3-203ENSMUST00000105541 1072 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Cdx1P18111 Gstm7-203ENSMUST00000106688 783 ntTSL 2 BASIC5.77□□□□□ -1.49
Cdx1P18111 Cypt3-202ENSMUST00000112573 669 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Cdx1P18111 Gm12611-201ENSMUST00000119452 1037 ntBASIC5.77□□□□□ -1.49
Cdx1P18111 Gm6798-201ENSMUST00000119961 360 ntBASIC5.77□□□□□ -1.49
Cdx1P18111 Gm12243-201ENSMUST00000128521 821 ntTSL 3 BASIC5.77□□□□□ -1.49
Cdx1P18111 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC5.77□□□□□ -1.49
Cdx1P18111 Fam229b-206ENSMUST00000136546 592 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
Cdx1P18111 Gm12911-201ENSMUST00000140639 703 ntTSL 3 BASIC5.77□□□□□ -1.49
Cdx1P18111 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Cdx1P18111 1700023C21Rik-201ENSMUST00000143247 389 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Cdx1P18111 Platr14-205ENSMUST00000146553 770 ntTSL 2 BASIC5.77□□□□□ -1.49
Cdx1P18111 Gm26046-201ENSMUST00000157312 166 ntBASIC5.77□□□□□ -1.49
Cdx1P18111 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC5.77□□□□□ -1.49
Cdx1P18111 Dctd-205ENSMUST00000174278 799 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
Cdx1P18111 Gm24824-201ENSMUST00000175097 78 ntBASIC5.77□□□□□ -1.49
Cdx1P18111 Trav7n-6-201ENSMUST00000178100 381 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Cdx1P18111 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC5.77□□□□□ -1.49
Cdx1P18111 Gm8167-201ENSMUST00000183320 958 ntBASIC5.77□□□□□ -1.49
Cdx1P18111 Gm3121-201ENSMUST00000187086 406 ntBASIC5.77□□□□□ -1.49
Cdx1P18111 4933417E11Rik-201ENSMUST00000188213 1093 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Cdx1P18111 Gm17867-201ENSMUST00000188981 391 ntBASIC5.77□□□□□ -1.49
Cdx1P18111 Gm29145-201ENSMUST00000189914 456 ntBASIC5.77□□□□□ -1.49
Cdx1P18111 Gm20690-202ENSMUST00000195126 355 ntBASIC5.77□□□□□ -1.49
Cdx1P18111 1700039M15Rik-201ENSMUST00000195377 1120 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Cdx1P18111 Gm42161-201ENSMUST00000196278 726 ntTSL 5 BASIC5.77□□□□□ -1.49
Cdx1P18111 Gm2287-201ENSMUST00000197417 1084 ntBASIC5.77□□□□□ -1.49
Cdx1P18111 Gm43287-201ENSMUST00000197747 600 ntBASIC5.77□□□□□ -1.49
Cdx1P18111 Gm43212-201ENSMUST00000198208 394 ntBASIC5.77□□□□□ -1.49
Cdx1P18111 Reg1-202ENSMUST00000204601 766 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Cdx1P18111 Reg1-203ENSMUST00000204687 904 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Cdx1P18111 Gm44448-201ENSMUST00000205104 393 ntTSL 5 BASIC5.77□□□□□ -1.49
Cdx1P18111 Tmem156-206ENSMUST00000212640 1271 ntTSL 5 BASIC5.77□□□□□ -1.49
Cdx1P18111 AC159462.2-201ENSMUST00000217559 463 ntTSL 5 BASIC5.77□□□□□ -1.49
Cdx1P18111 AC121788.2-201ENSMUST00000218284 1255 ntTSL 5 BASIC5.77□□□□□ -1.49
Cdx1P18111 Gm4898-201ENSMUST00000218519 832 ntBASIC5.77□□□□□ -1.49
Cdx1P18111 RMST_1.1-213ENSMUST00000220288 792 ntTSL 5 BASIC5.77□□□□□ -1.49
Cdx1P18111 AC157571.1-201ENSMUST00000222014 520 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms