Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gm10826-201ENSMUST00000215366 3304 ntBASIC5.09□□□□□ -1.59
TcraP01849 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
TcraP01849 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
TcraP01849 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
TcraP01849 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
TcraP01849 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
TcraP01849 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
TcraP01849 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
TcraP01849 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
TcraP01849 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TcraP01849 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
TcraP01849 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC5.08□□□□□ -1.6
TcraP01849 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TcraP01849 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TcraP01849 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC5.08□□□□□ -1.6
TcraP01849 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TcraP01849 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TcraP01849 Gm45786-201ENSMUST00000213021 2278 ntBASIC5.08□□□□□ -1.6
TcraP01849 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
TcraP01849 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
TcraP01849 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC5.08□□□□□ -1.6
TcraP01849 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TcraP01849 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TcraP01849 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TcraP01849 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC5.08□□□□□ -1.6
TcraP01849 Gm43502-201ENSMUST00000200263 2596 ntBASIC5.08□□□□□ -1.6
TcraP01849 Gm10401-201ENSMUST00000100848 607 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
TcraP01849 Pex3-203ENSMUST00000105541 1072 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TcraP01849 Gm24195-201ENSMUST00000116804 137 ntBASIC5.08□□□□□ -1.6
TcraP01849 Gm13929-201ENSMUST00000117553 1125 ntBASIC5.08□□□□□ -1.6
TcraP01849 Gm11295-201ENSMUST00000121379 803 ntBASIC5.08□□□□□ -1.6
TcraP01849 Gm13282-201ENSMUST00000121577 545 ntBASIC5.08□□□□□ -1.6
TcraP01849 Gm22275-201ENSMUST00000122470 310 ntBASIC5.08□□□□□ -1.6
TcraP01849 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
TcraP01849 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC5.08□□□□□ -1.6
TcraP01849 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TcraP01849 Gm24994-201ENSMUST00000157414 121 ntBASIC5.08□□□□□ -1.6
TcraP01849 Gm25266-201ENSMUST00000158521 304 ntBASIC5.08□□□□□ -1.6
TcraP01849 Gm6428-201ENSMUST00000161062 345 ntBASIC5.08□□□□□ -1.6
TcraP01849 Gm4781-201ENSMUST00000167995 781 ntBASIC5.08□□□□□ -1.6
TcraP01849 Scgb2b20-201ENSMUST00000179248 523 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TcraP01849 Mir6415-201ENSMUST00000184064 100 ntBASIC5.08□□□□□ -1.6
TcraP01849 Gm27675-201ENSMUST00000184527 94 ntBASIC5.08□□□□□ -1.6
TcraP01849 Gm27595-201ENSMUST00000184579 112 ntBASIC5.08□□□□□ -1.6
TcraP01849 Scgb2b18-201ENSMUST00000186529 523 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
TcraP01849 Gm29357-201ENSMUST00000186877 698 ntBASIC5.08□□□□□ -1.6
TcraP01849 Scgb2b11-201ENSMUST00000188293 523 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
TcraP01849 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TcraP01849 Slamf6-204ENSMUST00000194561 984 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
TcraP01849 Gm10416-201ENSMUST00000197379 645 ntBASIC5.08□□□□□ -1.6
TcraP01849 Gm42808-201ENSMUST00000198212 285 ntTSL 5 BASIC5.08□□□□□ -1.6
TcraP01849 Gm42752-201ENSMUST00000198394 1106 ntBASIC5.08□□□□□ -1.6
TcraP01849 Gm43699-201ENSMUST00000201312 818 ntTSL 3 BASIC5.08□□□□□ -1.6
TcraP01849 Gm33926-201ENSMUST00000208755 357 ntTSL 2 BASIC5.08□□□□□ -1.6
TcraP01849 Gm45145-203ENSMUST00000208872 958 ntTSL 5 BASIC5.08□□□□□ -1.6
TcraP01849 Gm45509-201ENSMUST00000209624 1229 ntBASIC5.08□□□□□ -1.6
TcraP01849 Gm8168-201ENSMUST00000209631 948 ntBASIC5.08□□□□□ -1.6
TcraP01849 Gm18192-201ENSMUST00000210174 941 ntBASIC5.08□□□□□ -1.6
TcraP01849 Gm5119-201ENSMUST00000215858 634 ntBASIC5.08□□□□□ -1.6
TcraP01849 AC153864.1-201ENSMUST00000218482 523 ntBASIC5.08□□□□□ -1.6
TcraP01849 Gm4898-201ENSMUST00000218519 832 ntBASIC5.08□□□□□ -1.6
TcraP01849 Gm7762-201ENSMUST00000220595 604 ntTSL 3 BASIC5.08□□□□□ -1.6
TcraP01849 Gm18629-201ENSMUST00000222496 884 ntBASIC5.08□□□□□ -1.6
TcraP01849 Gm2915-201ENSMUST00000222565 787 ntBASIC5.08□□□□□ -1.6
TcraP01849 Msmb-201ENSMUST00000022464 562 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TcraP01849 AC163638.1-201ENSMUST00000224818 392 ntBASIC5.08□□□□□ -1.6
TcraP01849 Lyzl1-201ENSMUST00000025076 846 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TcraP01849 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
TcraP01849 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC5.08□□□□□ -1.6
TcraP01849 Olfr530-201ENSMUST00000074177 1080 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
TcraP01849 Defa30-201ENSMUST00000098898 398 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TcraP01849 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC5.08□□□□□ -1.6
TcraP01849 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
TcraP01849 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
TcraP01849 Glra4-201ENSMUST00000018739 1831 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TcraP01849 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
TcraP01849 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
TcraP01849 Gm43360-201ENSMUST00000197656 2887 ntBASIC5.08□□□□□ -1.6
TcraP01849 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
TcraP01849 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
TcraP01849 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TcraP01849 Gm42541-201ENSMUST00000199871 2249 ntBASIC5.08□□□□□ -1.6
TcraP01849 Gm43282-201ENSMUST00000201848 2157 ntBASIC5.08□□□□□ -1.6
TcraP01849 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TcraP01849 Gm20644-201ENSMUST00000176721 2063 ntBASIC5.08□□□□□ -1.6
TcraP01849 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC5.08□□□□□ -1.6
TcraP01849 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TcraP01849 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
TcraP01849 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TcraP01849 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TcraP01849 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
TcraP01849 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TcraP01849 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC5.07□□□□□ -1.6
TcraP01849 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TcraP01849 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
TcraP01849 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TcraP01849 Gm6767-201ENSMUST00000118650 1381 ntBASIC5.07□□□□□ -1.6
TcraP01849 Ldhc-201ENSMUST00000014545 1370 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TcraP01849 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC5.07□□□□□ -1.6
TcraP01849 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms