Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Tmc3-201ENSMUST00000039317 6221 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Gm38284-201ENSMUST00000194803 4539 ntBASIC7.19□□□□□ -1.26
Col4a6B1AVK5 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Zfyve26-201ENSMUST00000021547 9391 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Cyld-205ENSMUST00000209532 7990 ntAPPRIS ALT1 TSL 5 BASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Ptpn3-201ENSMUST00000075637 6369 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Gm24473-201ENSMUST00000104483 131 ntBASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Gm20620-201ENSMUST00000177528 168 ntBASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Gm17048-201ENSMUST00000179266 847 ntBASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Gm35323-201ENSMUST00000191836 499 ntBASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Gm43212-201ENSMUST00000198208 394 ntBASIC7.19□□□□□ -1.26
Col4a6B1AVK5 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Gm18009-201ENSMUST00000203239 1016 ntBASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Gm5324-201ENSMUST00000208115 476 ntBASIC7.19□□□□□ -1.26
Col4a6B1AVK5 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC7.19□□□□□ -1.26
Col4a6B1AVK5 4930553I21Rik-201ENSMUST00000214016 580 ntBASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC7.19□□□□□ -1.26
Col4a6B1AVK5 AC154834.1-201ENSMUST00000224697 358 ntBASIC7.19□□□□□ -1.26
Col4a6B1AVK5 AC122034.1-201ENSMUST00000227641 595 ntBASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Gm10205-201ENSMUST00000087431 234 ntBASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Nrp2-205ENSMUST00000114155 6534 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Col4a6B1AVK5 AC139750.1-201ENSMUST00000223962 1300 ntBASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Gm16123-201ENSMUST00000118647 1517 ntBASIC7.19□□□□□ -1.26
Col4a6B1AVK5 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Col4a6B1AVK5 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Col4a6B1AVK5 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Col4a6B1AVK5 Ankrd49-206ENSMUST00000216372 2679 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Col4a6B1AVK5 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Col4a6B1AVK5 Cpsf2-201ENSMUST00000047357 5732 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Col4a6B1AVK5 Eif2ak4-202ENSMUST00000102527 4906 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Col4a6B1AVK5 Extl2-203ENSMUST00000106502 2840 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Col4a6B1AVK5 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Col4a6B1AVK5 Tns1-208ENSMUST00000187584 9916 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
Col4a6B1AVK5 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC7.18□□□□□ -1.26
Col4a6B1AVK5 Gm11853-201ENSMUST00000119687 1384 ntBASIC7.18□□□□□ -1.26
Col4a6B1AVK5 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Col4a6B1AVK5 Rnu11-201ENSMUST00000104135 134 ntBASIC7.18□□□□□ -1.26
Col4a6B1AVK5 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC7.18□□□□□ -1.26
Col4a6B1AVK5 Gm13400-201ENSMUST00000117436 380 ntBASIC7.18□□□□□ -1.26
Col4a6B1AVK5 Rps29-ps-201ENSMUST00000122083 172 ntBASIC7.18□□□□□ -1.26
Col4a6B1AVK5 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC7.18□□□□□ -1.26
Col4a6B1AVK5 Gm43351-201ENSMUST00000198737 326 ntTSL 5 BASIC7.18□□□□□ -1.26
Col4a6B1AVK5 Gm46379-201ENSMUST00000222551 265 ntBASIC7.18□□□□□ -1.26
Col4a6B1AVK5 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Col4a6B1AVK5 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Col4a6B1AVK5 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Col4a6B1AVK5 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Col4a6B1AVK5 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Col4a6B1AVK5 Chordc1-201ENSMUST00000001825 5789 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Col4a6B1AVK5 Marf1-201ENSMUST00000090300 7765 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Col4a6B1AVK5 Foxn3-201ENSMUST00000046859 7705 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Col4a6B1AVK5 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Col4a6B1AVK5 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Col4a6B1AVK5 Gm44745-201ENSMUST00000206563 2723 ntBASIC7.18□□□□□ -1.26
Col4a6B1AVK5 Iars-201ENSMUST00000047363 4396 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Col4a6B1AVK5 Ankrd27-201ENSMUST00000040844 4284 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Col4a6B1AVK5 Zfp939-202ENSMUST00000186855 2480 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Col4a6B1AVK5 AC124516.2-201ENSMUST00000221455 1829 ntBASIC7.17□□□□□ -1.26
Col4a6B1AVK5 Slc26a1-201ENSMUST00000051757 3812 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
Col4a6B1AVK5 Lig3-201ENSMUST00000021039 5957 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Col4a6B1AVK5 4931406B18Rik-208ENSMUST00000191516 2566 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Col4a6B1AVK5 Gm973-201ENSMUST00000114243 3595 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Col4a6B1AVK5 Tirap-201ENSMUST00000175765 4589 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Col4a6B1AVK5 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC7.17□□□□□ -1.26
Col4a6B1AVK5 Gm37403-201ENSMUST00000193775 3521 ntBASIC7.17□□□□□ -1.26
Col4a6B1AVK5 Gm13083-201ENSMUST00000105773 2464 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Col4a6B1AVK5 Arfgef1-203ENSMUST00000131556 3424 ntTSL 5 BASIC7.17□□□□□ -1.26
Col4a6B1AVK5 CT009480.2-201ENSMUST00000225152 3369 ntBASIC7.17□□□□□ -1.26
Col4a6B1AVK5 Eml1-201ENSMUST00000054955 3879 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Col4a6B1AVK5 Gm5401-201ENSMUST00000122444 365 ntBASIC7.17□□□□□ -1.26
Col4a6B1AVK5 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC7.17□□□□□ -1.26
Col4a6B1AVK5 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Col4a6B1AVK5 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC7.17□□□□□ -1.26
Col4a6B1AVK5 Gm25717-201ENSMUST00000158631 353 ntBASIC7.17□□□□□ -1.26
Col4a6B1AVK5 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Col4a6B1AVK5 Gm22655-201ENSMUST00000174949 96 ntBASIC7.17□□□□□ -1.26
Col4a6B1AVK5 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Col4a6B1AVK5 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Col4a6B1AVK5 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC7.17□□□□□ -1.26
Col4a6B1AVK5 Gm28918-201ENSMUST00000188822 699 ntBASIC7.17□□□□□ -1.26
Col4a6B1AVK5 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Col4a6B1AVK5 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Col4a6B1AVK5 Gm44360-201ENSMUST00000200081 82 ntBASIC7.17□□□□□ -1.26
Col4a6B1AVK5 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC7.17□□□□□ -1.26
Col4a6B1AVK5 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Col4a6B1AVK5 Mir196a-1-201ENSMUST00000083612 102 ntBASIC7.17□□□□□ -1.26
Col4a6B1AVK5 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Col4a6B1AVK5 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms