Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Pdc-204ENSMUST00000191228 1235 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim3Q9R1R2 Gm36991-201ENSMUST00000191800 648 ntBASIC6.68□□□□□ -1.34
Trim3Q9R1R2 Gm38079-201ENSMUST00000195603 154 ntBASIC6.68□□□□□ -1.34
Trim3Q9R1R2 Gm44471-201ENSMUST00000197963 100 ntBASIC6.68□□□□□ -1.34
Trim3Q9R1R2 Gm7943-201ENSMUST00000212078 1034 ntBASIC6.68□□□□□ -1.34
Trim3Q9R1R2 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC6.68□□□□□ -1.34
Trim3Q9R1R2 Olfr1262-201ENSMUST00000061701 1024 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Trim3Q9R1R2 Ly6c1-201ENSMUST00000065408 844 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim3Q9R1R2 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
Trim3Q9R1R2 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC6.68□□□□□ -1.34
Trim3Q9R1R2 CT009757.6-201ENSMUST00000220661 2312 ntBASIC6.68□□□□□ -1.34
Trim3Q9R1R2 Gm28819-202ENSMUST00000187416 1335 ntTSL 5 BASIC6.68□□□□□ -1.34
Trim3Q9R1R2 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC6.68□□□□□ -1.34
Trim3Q9R1R2 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC6.68□□□□□ -1.34
Trim3Q9R1R2 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim3Q9R1R2 Gm18508-201ENSMUST00000215790 1642 ntBASIC6.68□□□□□ -1.34
Trim3Q9R1R2 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Trim3Q9R1R2 AC131667.1-201ENSMUST00000214665 2175 ntBASIC6.68□□□□□ -1.34
Trim3Q9R1R2 4931403G20Rik-201ENSMUST00000180861 1699 ntTSL 5 BASIC6.68□□□□□ -1.34
Trim3Q9R1R2 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim3Q9R1R2 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim3Q9R1R2 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim3Q9R1R2 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Trim3Q9R1R2 AC139350.2-201ENSMUST00000226508 2331 ntBASIC6.67□□□□□ -1.34
Trim3Q9R1R2 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
Trim3Q9R1R2 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trim3Q9R1R2 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Trim3Q9R1R2 AC123705.1-201ENSMUST00000222512 2058 ntBASIC6.67□□□□□ -1.34
Trim3Q9R1R2 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trim3Q9R1R2 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trim3Q9R1R2 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC6.67□□□□□ -1.34
Trim3Q9R1R2 Gm29670-201ENSMUST00000190228 2491 ntBASIC6.67□□□□□ -1.34
Trim3Q9R1R2 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Trim3Q9R1R2 Gm37382-201ENSMUST00000193032 1596 ntBASIC6.67□□□□□ -1.34
Trim3Q9R1R2 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC6.67□□□□□ -1.34
Trim3Q9R1R2 Gm11850-201ENSMUST00000119679 479 ntBASIC6.67□□□□□ -1.34
Trim3Q9R1R2 Gm11371-201ENSMUST00000120294 385 ntBASIC6.67□□□□□ -1.34
Trim3Q9R1R2 Rps8-ps3-201ENSMUST00000121011 650 ntBASIC6.67□□□□□ -1.34
Trim3Q9R1R2 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Trim3Q9R1R2 Gm22025-201ENSMUST00000122734 302 ntBASIC6.67□□□□□ -1.34
Trim3Q9R1R2 H2-Ea-ps-201ENSMUST00000134042 686 ntBASIC6.67□□□□□ -1.34
Trim3Q9R1R2 Gm24422-201ENSMUST00000157800 119 ntBASIC6.67□□□□□ -1.34
Trim3Q9R1R2 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Trim3Q9R1R2 Mir7005-201ENSMUST00000185089 69 ntBASIC6.67□□□□□ -1.34
Trim3Q9R1R2 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC6.67□□□□□ -1.34
Trim3Q9R1R2 Gm7341-201ENSMUST00000192183 926 ntBASIC6.67□□□□□ -1.34
Trim3Q9R1R2 Gm37295-201ENSMUST00000192186 109 ntBASIC6.67□□□□□ -1.34
Trim3Q9R1R2 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC6.67□□□□□ -1.34
Trim3Q9R1R2 Gm37689-201ENSMUST00000193139 275 ntBASIC6.67□□□□□ -1.34
Trim3Q9R1R2 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Trim3Q9R1R2 Gm8921-201ENSMUST00000204306 649 ntBASIC6.67□□□□□ -1.34
Trim3Q9R1R2 Gm29759-201ENSMUST00000205860 327 ntBASIC6.67□□□□□ -1.34
Trim3Q9R1R2 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Trim3Q9R1R2 Gm45463-202ENSMUST00000210735 1188 ntTSL 5 BASIC6.67□□□□□ -1.34
Trim3Q9R1R2 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC6.67□□□□□ -1.34
Trim3Q9R1R2 AC165260.3-201ENSMUST00000225101 665 ntBASIC6.67□□□□□ -1.34
Trim3Q9R1R2 CT009728.1-201ENSMUST00000225228 1050 ntBASIC6.67□□□□□ -1.34
Trim3Q9R1R2 Myl12a-201ENSMUST00000024846 980 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
Trim3Q9R1R2 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Trim3Q9R1R2 Olfr1287-201ENSMUST00000075390 918 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Trim3Q9R1R2 Olfr961-201ENSMUST00000076548 949 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Trim3Q9R1R2 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Trim3Q9R1R2 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Trim3Q9R1R2 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Trim3Q9R1R2 Gm37891-201ENSMUST00000195585 1326 ntBASIC6.67□□□□□ -1.34
Trim3Q9R1R2 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Trim3Q9R1R2 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Trim3Q9R1R2 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trim3Q9R1R2 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trim3Q9R1R2 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Trim3Q9R1R2 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trim3Q9R1R2 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Trim3Q9R1R2 CT025639.1-201ENSMUST00000223906 1375 ntBASIC6.67□□□□□ -1.34
Trim3Q9R1R2 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trim3Q9R1R2 Olfr1410-203ENSMUST00000217316 7927 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Trim3Q9R1R2 Gm7945-201ENSMUST00000164948 1428 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Trim3Q9R1R2 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Trim3Q9R1R2 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Trim3Q9R1R2 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trim3Q9R1R2 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC6.66□□□□□ -1.34
Trim3Q9R1R2 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Trim3Q9R1R2 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Trim3Q9R1R2 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trim3Q9R1R2 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
Trim3Q9R1R2 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Trim3Q9R1R2 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Trim3Q9R1R2 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trim3Q9R1R2 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trim3Q9R1R2 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC6.66□□□□□ -1.34
Trim3Q9R1R2 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trim3Q9R1R2 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trim3Q9R1R2 Gm25757-201ENSMUST00000103986 123 ntBASIC6.66□□□□□ -1.34
Trim3Q9R1R2 Gm14279-201ENSMUST00000117142 332 ntBASIC6.66□□□□□ -1.34
Trim3Q9R1R2 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC6.66□□□□□ -1.34
Trim3Q9R1R2 Gm10243-201ENSMUST00000117571 333 ntBASIC6.66□□□□□ -1.34
Trim3Q9R1R2 Gm13545-201ENSMUST00000119044 482 ntBASIC6.66□□□□□ -1.34
Trim3Q9R1R2 Rpl36-ps7-201ENSMUST00000119462 315 ntBASIC6.66□□□□□ -1.34
Trim3Q9R1R2 Gm14202-201ENSMUST00000120121 311 ntBASIC6.66□□□□□ -1.34
Trim3Q9R1R2 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC6.66□□□□□ -1.34
Trim3Q9R1R2 Gm15096-201ENSMUST00000121918 878 ntBASIC6.66□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 93.7 ms