Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm29453-201ENSMUST00000186428 1279 ntBASIC7.53□□□□□ -1.2
Trim39Q9ESN2 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Trim39Q9ESN2 Gm28145-201ENSMUST00000189742 380 ntBASIC7.53□□□□□ -1.2
Trim39Q9ESN2 Ing5-203ENSMUST00000190476 918 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Trim39Q9ESN2 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC7.53□□□□□ -1.2
Trim39Q9ESN2 Rpl7a-ps7-201ENSMUST00000198361 776 ntBASIC7.53□□□□□ -1.2
Trim39Q9ESN2 Gm43841-201ENSMUST00000199491 586 ntBASIC7.53□□□□□ -1.2
Trim39Q9ESN2 Gm18691-201ENSMUST00000203593 872 ntBASIC7.53□□□□□ -1.2
Trim39Q9ESN2 Gm45901-201ENSMUST00000203807 661 ntTSL 5 BASIC7.53□□□□□ -1.2
Trim39Q9ESN2 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Trim39Q9ESN2 4933407I05Rik-201ENSMUST00000213311 482 ntTSL 5 BASIC7.53□□□□□ -1.2
Trim39Q9ESN2 AC137127.2-201ENSMUST00000215086 935 ntTSL 5 BASIC7.53□□□□□ -1.2
Trim39Q9ESN2 AC154904.1-201ENSMUST00000219510 312 ntBASIC7.53□□□□□ -1.2
Trim39Q9ESN2 Gm34278-201ENSMUST00000220534 622 ntTSL 5 BASIC7.53□□□□□ -1.2
Trim39Q9ESN2 Gm18362-201ENSMUST00000221786 529 ntBASIC7.53□□□□□ -1.2
Trim39Q9ESN2 CT954323.2-201ENSMUST00000222056 213 ntBASIC7.53□□□□□ -1.2
Trim39Q9ESN2 AC124465.1-201ENSMUST00000222349 746 ntTSL 3 BASIC7.53□□□□□ -1.2
Trim39Q9ESN2 Il1f6-201ENSMUST00000028361 883 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Trim39Q9ESN2 Svs3b-201ENSMUST00000063132 1249 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Trim39Q9ESN2 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Trim39Q9ESN2 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Trim39Q9ESN2 Gm22977-201ENSMUST00000082615 107 ntBASIC7.53□□□□□ -1.2
Trim39Q9ESN2 Ocm-202ENSMUST00000085704 330 ntAPPRIS P1 TSL 3 BASIC7.53□□□□□ -1.2
Trim39Q9ESN2 Mrgprx1-201ENSMUST00000094390 1180 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Trim39Q9ESN2 Ehbp1-207ENSMUST00000180360 4971 ntAPPRIS P3 TSL 5 BASIC7.53□□□□□ -1.2
Trim39Q9ESN2 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Trim39Q9ESN2 Olfr295-202ENSMUST00000215365 6013 ntAPPRIS P1 TSL 3 BASIC7.53□□□□□ -1.2
Trim39Q9ESN2 Malat1-201ENSMUST00000172812 6983 ntBASIC7.53□□□□□ -1.2
Trim39Q9ESN2 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Trim39Q9ESN2 Abca4-201ENSMUST00000013995 7263 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Trim39Q9ESN2 Gpm6b-203ENSMUST00000112224 4644 ntAPPRIS ALT1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Trim39Q9ESN2 Ube2v1-201ENSMUST00000060645 1586 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Trim39Q9ESN2 Olfr221-201ENSMUST00000052560 2741 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Trim39Q9ESN2 Adgrl3-206ENSMUST00000118034 4947 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
Trim39Q9ESN2 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Trim39Q9ESN2 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC7.53□□□□□ -1.2
Trim39Q9ESN2 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Trim39Q9ESN2 Psg26-201ENSMUST00000094798 2086 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Trim39Q9ESN2 AC192333.5-201ENSMUST00000224620 2350 ntBASIC7.53□□□□□ -1.2
Trim39Q9ESN2 Olfr433-202ENSMUST00000214690 2968 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Trim39Q9ESN2 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
Trim39Q9ESN2 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Trim39Q9ESN2 Tbc1d24-208ENSMUST00000201089 4081 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
Trim39Q9ESN2 Gm10997-201ENSMUST00000210294 1500 ntBASIC7.52□□□□□ -1.2
Trim39Q9ESN2 Tmcc1-209ENSMUST00000173548 1622 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.2
Trim39Q9ESN2 Lipc-204ENSMUST00000216798 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.2
Trim39Q9ESN2 4933402N03Rik-201ENSMUST00000070980 1826 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
Trim39Q9ESN2 Gm36251-201ENSMUST00000213712 1914 ntTSL 5 BASIC7.52□□□□□ -1.2
Trim39Q9ESN2 Gm8844-201ENSMUST00000119460 2614 ntBASIC7.52□□□□□ -1.21
Trim39Q9ESN2 Klrc2-205ENSMUST00000145984 2811 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Trim39Q9ESN2 Ncor1-204ENSMUST00000101066 8852 ntAPPRIS P2 TSL 5 BASIC7.52□□□□□ -1.21
Trim39Q9ESN2 Adgrd1-203ENSMUST00000156437 4141 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Trim39Q9ESN2 Sec16b-201ENSMUST00000027881 4414 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Trim39Q9ESN2 Sp100-210ENSMUST00000147552 1597 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Trim39Q9ESN2 Gm46995-201ENSMUST00000223445 1378 ntBASIC7.52□□□□□ -1.21
Trim39Q9ESN2 Gm25594-201ENSMUST00000102274 82 ntBASIC7.52□□□□□ -1.21
Trim39Q9ESN2 Ighv2-4-201ENSMUST00000103447 350 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Trim39Q9ESN2 Gm22900-201ENSMUST00000104538 130 ntBASIC7.52□□□□□ -1.21
Trim39Q9ESN2 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC7.52□□□□□ -1.21
Trim39Q9ESN2 Fam166b-202ENSMUST00000107928 762 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
Trim39Q9ESN2 Gm14682-201ENSMUST00000117977 524 ntBASIC7.52□□□□□ -1.21
Trim39Q9ESN2 Gm13879-201ENSMUST00000118308 242 ntBASIC7.52□□□□□ -1.21
Trim39Q9ESN2 Atp5k-202ENSMUST00000118632 272 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Trim39Q9ESN2 Gm12994-201ENSMUST00000119601 447 ntBASIC7.52□□□□□ -1.21
Trim39Q9ESN2 Gm12206-201ENSMUST00000119795 601 ntBASIC7.52□□□□□ -1.21
Trim39Q9ESN2 Gm12917-201ENSMUST00000119850 639 ntBASIC7.52□□□□□ -1.21
Trim39Q9ESN2 Gm15166-201ENSMUST00000120790 385 ntBASIC7.52□□□□□ -1.21
Trim39Q9ESN2 Gm11534-202ENSMUST00000129261 470 ntTSL 3 BASIC7.52□□□□□ -1.21
Trim39Q9ESN2 F730035M05Rik-201ENSMUST00000145871 1296 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Trim39Q9ESN2 Gm13405-201ENSMUST00000146769 708 ntTSL 3 BASIC7.52□□□□□ -1.21
Trim39Q9ESN2 Rsrc1-209ENSMUST00000162693 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Trim39Q9ESN2 Dcpp2-202ENSMUST00000168272 589 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Trim39Q9ESN2 Gm8540-201ENSMUST00000168952 732 ntBASIC7.52□□□□□ -1.21
Trim39Q9ESN2 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC7.52□□□□□ -1.21
Trim39Q9ESN2 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC7.52□□□□□ -1.21
Trim39Q9ESN2 Gm19200-201ENSMUST00000182579 1001 ntBASIC7.52□□□□□ -1.21
Trim39Q9ESN2 Gm27659-201ENSMUST00000183472 98 ntBASIC7.52□□□□□ -1.21
Trim39Q9ESN2 Gm29195-201ENSMUST00000189038 379 ntBASIC7.52□□□□□ -1.21
Trim39Q9ESN2 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
Trim39Q9ESN2 Gm29525-201ENSMUST00000189844 699 ntBASIC7.52□□□□□ -1.21
Trim39Q9ESN2 Gm29523-201ENSMUST00000191415 699 ntBASIC7.52□□□□□ -1.21
Trim39Q9ESN2 Gm38033-201ENSMUST00000192037 269 ntTSL 5 BASIC7.52□□□□□ -1.21
Trim39Q9ESN2 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Trim39Q9ESN2 Rpl22l1-206ENSMUST00000194649 525 ntAPPRIS ALT1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Trim39Q9ESN2 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC7.52□□□□□ -1.21
Trim39Q9ESN2 Gm18855-201ENSMUST00000206689 570 ntBASIC7.52□□□□□ -1.21
Trim39Q9ESN2 Gm18877-201ENSMUST00000207706 539 ntBASIC7.52□□□□□ -1.21
Trim39Q9ESN2 Gm4548-201ENSMUST00000208487 509 ntBASIC7.52□□□□□ -1.21
Trim39Q9ESN2 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC7.52□□□□□ -1.21
Trim39Q9ESN2 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Trim39Q9ESN2 Gm29154-206ENSMUST00000213410 1180 ntTSL 5 BASIC7.52□□□□□ -1.21
Trim39Q9ESN2 AC158239.1-201ENSMUST00000216890 779 ntTSL 5 BASIC7.52□□□□□ -1.21
Trim39Q9ESN2 AC166358.1-201ENSMUST00000220677 105 ntBASIC7.52□□□□□ -1.21
Trim39Q9ESN2 AC153662.2-201ENSMUST00000221097 120 ntBASIC7.52□□□□□ -1.21
Trim39Q9ESN2 AC156037.2-201ENSMUST00000221284 112 ntBASIC7.52□□□□□ -1.21
Trim39Q9ESN2 AC166341.6-201ENSMUST00000221528 105 ntBASIC7.52□□□□□ -1.21
Trim39Q9ESN2 CT030242.1-201ENSMUST00000221945 125 ntBASIC7.52□□□□□ -1.21
Trim39Q9ESN2 AC124772.2-201ENSMUST00000222049 154 ntBASIC7.52□□□□□ -1.21
Trim39Q9ESN2 AC153663.1-201ENSMUST00000222165 120 ntBASIC7.52□□□□□ -1.21
Trim39Q9ESN2 CT030157.1-201ENSMUST00000222355 148 ntBASIC7.52□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms