Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Cdc40Q9DC48 Gm43181-201ENSMUST00000197001 2072 ntBASIC6.61□□□□□ -1.35
Cdc40Q9DC48 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Zfp935-202ENSMUST00000221747 2492 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Pramef20-201ENSMUST00000121109 1434 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Cdc40Q9DC48 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Gm23437-201ENSMUST00000104036 127 ntBASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Gm11320-201ENSMUST00000119434 463 ntBASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Gm12104-201ENSMUST00000120359 979 ntBASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Gm15006-201ENSMUST00000121419 1122 ntBASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Gm13724-201ENSMUST00000122395 1155 ntBASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Gm22342-201ENSMUST00000122647 298 ntBASIC6.6□□□□□ -1.35
Cdc40Q9DC48 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC6.6□□□□□ -1.35
Cdc40Q9DC48 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Gm22882-201ENSMUST00000157749 124 ntBASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Gm16297-201ENSMUST00000161466 459 ntBASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Gm5656-201ENSMUST00000171020 1096 ntBASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Gm17786-201ENSMUST00000182000 427 ntBASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC6.6□□□□□ -1.35
Cdc40Q9DC48 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Gm28416-201ENSMUST00000188334 292 ntBASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Gm28952-201ENSMUST00000189285 681 ntBASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Gm36928-201ENSMUST00000192466 694 ntBASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Gm37325-201ENSMUST00000194971 694 ntBASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Cdc40Q9DC48 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC6.6□□□□□ -1.35
Cdc40Q9DC48 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Cdc40Q9DC48 AC121997.2-202ENSMUST00000227158 939 ntBASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Olfr1262-201ENSMUST00000061701 1024 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Cdc40Q9DC48 n-R5s60-201ENSMUST00000083299 119 ntBASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Cdc40Q9DC48 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Ate1-208ENSMUST00000216011 1680 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Phtf1-204ENSMUST00000117150 2921 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC6.6□□□□□ -1.35
Cdc40Q9DC48 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Cdc40Q9DC48 AC135119.1-202ENSMUST00000228435 2203 ntBASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Gm10388-201ENSMUST00000205001 2936 ntBASIC6.6□□□□□ -1.35
Cdc40Q9DC48 Tor1aip2-202ENSMUST00000065648 2529 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Cdc40Q9DC48 Gm9585-201ENSMUST00000219681 1404 ntBASIC6.59□□□□□ -1.35
Cdc40Q9DC48 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC6.59□□□□□ -1.35
Cdc40Q9DC48 Gm44441-201ENSMUST00000203642 2475 ntBASIC6.59□□□□□ -1.35
Cdc40Q9DC48 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Cdc40Q9DC48 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Cdc40Q9DC48 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Cdc40Q9DC48 Gm11853-201ENSMUST00000119687 1384 ntBASIC6.59□□□□□ -1.35
Cdc40Q9DC48 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Cdc40Q9DC48 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Cdc40Q9DC48 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Cdc40Q9DC48 Adgre1-202ENSMUST00000086763 3245 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Cdc40Q9DC48 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Cdc40Q9DC48 Gm22231-201ENSMUST00000101027 73 ntBASIC6.59□□□□□ -1.35
Cdc40Q9DC48 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Cdc40Q9DC48 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC6.59□□□□□ -1.35
Cdc40Q9DC48 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC6.59□□□□□ -1.35
Cdc40Q9DC48 Gm12635-201ENSMUST00000117285 752 ntBASIC6.59□□□□□ -1.35
Cdc40Q9DC48 Gm8662-201ENSMUST00000118644 574 ntBASIC6.59□□□□□ -1.35
Cdc40Q9DC48 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC6.59□□□□□ -1.35
Cdc40Q9DC48 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC6.59□□□□□ -1.35
Cdc40Q9DC48 Gm22024-201ENSMUST00000122733 287 ntBASIC6.59□□□□□ -1.35
Cdc40Q9DC48 Gm5970-201ENSMUST00000131638 1216 ntBASIC6.59□□□□□ -1.35
Cdc40Q9DC48 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC6.59□□□□□ -1.35
Cdc40Q9DC48 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Cdc40Q9DC48 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC6.59□□□□□ -1.35
Cdc40Q9DC48 Gm23018-201ENSMUST00000177928 109 ntBASIC6.59□□□□□ -1.35
Cdc40Q9DC48 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Cdc40Q9DC48 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC6.59□□□□□ -1.35
Cdc40Q9DC48 Mir8120-201ENSMUST00000185035 139 ntBASIC6.59□□□□□ -1.35
Cdc40Q9DC48 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC6.59□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms