Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm29413-201ENSMUST00000186019 880 ntBASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Gm20871-201ENSMUST00000191322 931 ntBASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Gm34015-201ENSMUST00000194908 451 ntBASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Gm37310-201ENSMUST00000195237 2968 ntBASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Gm42850-201ENSMUST00000202094 201 ntBASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Gm18691-201ENSMUST00000203593 872 ntBASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Gm44649-202ENSMUST00000206896 635 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Rps3-205ENSMUST00000208532 489 ntTSL 5 BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 AC122901.2-201ENSMUST00000216926 285 ntBASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 AC153974.1-201ENSMUST00000219012 430 ntTSL 5 BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Tssk4-204ENSMUST00000226591 1243 ntAPPRIS ALT2 BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 AC131033.2-201ENSMUST00000228138 1011 ntBASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Olfr275-201ENSMUST00000095085 960 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Cd44-208ENSMUST00000111198 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Sav1-201ENSMUST00000021467 2524 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Galnt11-203ENSMUST00000114952 2449 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Rnf24-204ENSMUST00000165420 5833 ntAPPRIS P1 TSL 3 BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Ate1-208ENSMUST00000216011 1680 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Gm21051-201ENSMUST00000221757 1688 ntBASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Gm37420-201ENSMUST00000195332 2912 ntBASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Gm20501-202ENSMUST00000211303 2194 ntBASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Musk-207ENSMUST00000177951 3352 ntTSL 5 BASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Musk-204ENSMUST00000098059 3352 ntTSL 5 BASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Gm42721-201ENSMUST00000197165 1523 ntBASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Crb1-202ENSMUST00000196402 2711 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Zfp143-204ENSMUST00000209505 2693 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Hpx-201ENSMUST00000033185 1499 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Dis3l-202ENSMUST00000113890 3224 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Senp1-201ENSMUST00000044189 6575 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Gm45001-201ENSMUST00000208279 2515 ntBASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Gm43059-201ENSMUST00000202437 1388 ntBASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Dtwd1-202ENSMUST00000170908 1342 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Ptk2b-208ENSMUST00000178730 3863 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Mir290a-201ENSMUST00000104627 83 ntBASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Gm15125-201ENSMUST00000116185 800 ntBASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Gm12452-201ENSMUST00000117128 331 ntBASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Gm12310-201ENSMUST00000118013 492 ntBASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Gm15033-201ENSMUST00000118188 673 ntBASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Atp5k-202ENSMUST00000118632 272 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Gm12375-201ENSMUST00000119331 921 ntBASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Gm15194-201ENSMUST00000120453 434 ntBASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Gm7212-201ENSMUST00000120817 348 ntBASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Gm13360-201ENSMUST00000121607 799 ntBASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Gm14609-201ENSMUST00000122176 902 ntBASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Gm12120-201ENSMUST00000125068 592 ntTSL 3 BASIC7.88□□□□□ -1.15
Trim42Q9D2H5 9430024E24Rik-201ENSMUST00000130532 713 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Trim42Q9D2H5 1700092C02Rik-201ENSMUST00000134397 359 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Gm28845-201ENSMUST00000144760 733 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Gm13402-201ENSMUST00000153600 424 ntTSL 5 BASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Gm13997-201ENSMUST00000155641 336 ntTSL 3 BASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Gm20616-201ENSMUST00000177262 716 ntTSL 3 BASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Rnf170-ps-201ENSMUST00000181188 859 ntBASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Gm26957-201ENSMUST00000182645 977 ntBASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Mocs2-212ENSMUST00000184214 551 ntTSL 3 BASIC7.88□□□□□ -1.15
Trim42Q9D2H5 1700019D03Rik-204ENSMUST00000186266 623 ntAPPRIS P1 TSL 3 BASIC7.88□□□□□ -1.15
Trim42Q9D2H5 1700084F23Rik-201ENSMUST00000186662 1044 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Gm20832-201ENSMUST00000189076 665 ntBASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Gm30638-201ENSMUST00000195570 656 ntBASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Gm36728-201ENSMUST00000195782 665 ntBASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Gm5981-201ENSMUST00000199912 487 ntBASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Gm30270-201ENSMUST00000202675 524 ntTSL 2 BASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Gm5317-201ENSMUST00000204445 847 ntBASIC7.88□□□□□ -1.15
Trim42Q9D2H5 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC7.88□□□□□ -1.15
Trim42Q9D2H5 5830408C22Rik-203ENSMUST00000210596 326 ntTSL 3 BASIC7.88□□□□□ -1.15
Trim42Q9D2H5 4930503L19Rik-203ENSMUST00000212074 1210 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Gm7639-201ENSMUST00000212608 484 ntBASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Gm3011-201ENSMUST00000215669 582 ntBASIC7.88□□□□□ -1.15
Trim42Q9D2H5 4933404K13Rik-203ENSMUST00000217125 1060 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Gm36719-201ENSMUST00000219518 927 ntTSL 5 BASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Gm46312-201ENSMUST00000220961 420 ntBASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Gnrh1-202ENSMUST00000223929 428 ntBASIC7.88□□□□□ -1.15
Trim42Q9D2H5 AC239878.2-201ENSMUST00000224048 464 ntBASIC7.88□□□□□ -1.15
Trim42Q9D2H5 CT030646.1-201ENSMUST00000225049 980 ntBASIC7.88□□□□□ -1.15
Trim42Q9D2H5 AC126805.1-201ENSMUST00000225142 262 ntBASIC7.88□□□□□ -1.15
Trim42Q9D2H5 AC122937.2-201ENSMUST00000228258 1051 ntBASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Atp5k-201ENSMUST00000049628 371 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Svs3b-201ENSMUST00000063132 1249 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Olfr54-202ENSMUST00000215409 4782 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms