Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC4.78□□□□□ -1.64
Sec61bQ9CQS8 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC4.78□□□□□ -1.64
Sec61bQ9CQS8 Gm12592-201ENSMUST00000155332 2954 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Sec61bQ9CQS8 Gm16211-201ENSMUST00000147722 1620 ntTSL 5 BASIC4.78□□□□□ -1.64
Sec61bQ9CQS8 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Sec61bQ9CQS8 Pax6-204ENSMUST00000111083 2370 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
Sec61bQ9CQS8 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Sec61bQ9CQS8 AC134917.1-201ENSMUST00000220517 1449 ntBASIC4.78□□□□□ -1.64
Sec61bQ9CQS8 Zfp541-203ENSMUST00000210805 4084 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Sec61bQ9CQS8 Acer2-202ENSMUST00000084433 4060 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Sec61bQ9CQS8 Fam110b-202ENSMUST00000108380 3119 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Sec61bQ9CQS8 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Sec61bQ9CQS8 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Sec61bQ9CQS8 Gm26690-201ENSMUST00000181457 1997 ntTSL 5 BASIC4.78□□□□□ -1.64
Sec61bQ9CQS8 Zscan5b-201ENSMUST00000072662 1980 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Sec61bQ9CQS8 AC061963.2-201ENSMUST00000213541 2739 ntBASIC4.78□□□□□ -1.64
Sec61bQ9CQS8 Gm28791-201ENSMUST00000185888 1779 ntBASIC4.78□□□□□ -1.64
Sec61bQ9CQS8 Myof-211ENSMUST00000226068 6633 ntAPPRIS ALT2 BASIC4.78□□□□□ -1.64
Sec61bQ9CQS8 Mirg-204ENSMUST00000182185 3822 ntTSL 5 BASIC4.78□□□□□ -1.64
Sec61bQ9CQS8 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC4.78□□□□□ -1.64
Sec61bQ9CQS8 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Sec61bQ9CQS8 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Sec61bQ9CQS8 Gm15826-201ENSMUST00000121328 1384 ntBASIC4.78□□□□□ -1.64
Sec61bQ9CQS8 Arhgef38-203ENSMUST00000161022 1912 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Sec61bQ9CQS8 Olfr297-202ENSMUST00000172965 1928 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Sec61bQ9CQS8 9630002D21Rik-201ENSMUST00000221128 1351 ntTSL 5 BASIC4.78□□□□□ -1.64
Sec61bQ9CQS8 AC123665.5-201ENSMUST00000226648 1392 ntBASIC4.78□□□□□ -1.64
Sec61bQ9CQS8 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Sec61bQ9CQS8 Tmem209-203ENSMUST00000115157 2273 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Cbx3-204ENSMUST00000114446 1719 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Nrk-201ENSMUST00000064937 6604 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Elmo3-201ENSMUST00000109375 3189 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Kif3a-203ENSMUST00000120613 3161 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Syncrip-211ENSMUST00000174688 3176 ntTSL 5 BASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Mum1l1-203ENSMUST00000113043 4600 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Pitrm1-201ENSMUST00000021611 3318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Gm17300-201ENSMUST00000172202 1527 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Gm4961-201ENSMUST00000197982 2249 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Cd22-203ENSMUST00000186154 3819 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Adgrb3-205ENSMUST00000135518 5432 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Zfp940-202ENSMUST00000108223 2560 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Sptan1-202ENSMUST00000095083 7883 ntTSL 5 BASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Pclo-201ENSMUST00000030691 20084 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Zswim9-202ENSMUST00000119139 3986 ntAPPRIS P5 TSL 1 (best) BASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Krt222-201ENSMUST00000038214 2042 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Mbd5-201ENSMUST00000047413 8543 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Gm37446-201ENSMUST00000193015 4136 ntBASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Ano3-201ENSMUST00000099623 6705 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Prss35-202ENSMUST00000179574 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Gm44620-201ENSMUST00000209183 2887 ntBASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 4930554H23Rik-201ENSMUST00000181327 2542 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Adgrl2-203ENSMUST00000168352 2151 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Tlk2-203ENSMUST00000106939 5494 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Olfr96-202ENSMUST00000213475 1834 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 C8a-201ENSMUST00000048947 1993 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 A230059L01Rik-201ENSMUST00000126596 2813 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Gbp7-202ENSMUST00000171263 2497 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Tusc5-201ENSMUST00000062024 3302 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 S100a16-204ENSMUST00000107333 608 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Snord88c-201ENSMUST00000116853 90 ntBASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Gm15076-201ENSMUST00000117076 474 ntBASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Gm14994-201ENSMUST00000117482 1092 ntBASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Gm15382-201ENSMUST00000118011 537 ntBASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Gm14335-201ENSMUST00000119165 810 ntBASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Gm5255-201ENSMUST00000120125 642 ntBASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Gm12044-201ENSMUST00000120335 213 ntBASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Gm13161-201ENSMUST00000120609 559 ntBASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Gm11404-201ENSMUST00000120872 494 ntBASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Gm14506-201ENSMUST00000121165 536 ntBASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Gm7309-201ENSMUST00000121670 581 ntBASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Gm14143-201ENSMUST00000121686 357 ntBASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Gm25844-201ENSMUST00000122587 309 ntBASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 4930570D08Rik-201ENSMUST00000130431 196 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Sulf2-207ENSMUST00000146497 3808 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Mef2a-208ENSMUST00000156690 5538 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Gm26271-201ENSMUST00000158349 104 ntBASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Lrmda-206ENSMUST00000162540 742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 H2-Aa-204ENSMUST00000174751 826 ntTSL 3 BASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Ly6g6c-203ENSMUST00000174876 723 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Aamdc-214ENSMUST00000178078 723 ntTSL 2 BASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Gm2035-201ENSMUST00000180053 435 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Mir6337-201ENSMUST00000184194 105 ntBASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Mark1-ps3-201ENSMUST00000184922 694 ntBASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Gm18448-201ENSMUST00000186286 599 ntBASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Gm28361-201ENSMUST00000188825 474 ntBASIC4.77□□□□□ -1.65
Sec61bQ9CQS8 Krtap14-202ENSMUST00000189774 856 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms