Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm42820-201ENSMUST00000200084 3063 ntBASIC6.92□□□□□ -1.3
Msh4Q99MT2 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
Msh4Q99MT2 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Msh4Q99MT2 Cep112-202ENSMUST00000106715 1161 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Msh4Q99MT2 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Msh4Q99MT2 Gm5752-201ENSMUST00000117771 594 ntBASIC6.92□□□□□ -1.3
Msh4Q99MT2 Gm15000-201ENSMUST00000118275 1243 ntBASIC6.92□□□□□ -1.3
Msh4Q99MT2 Gm13744-201ENSMUST00000118953 850 ntBASIC6.92□□□□□ -1.3
Msh4Q99MT2 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
Msh4Q99MT2 1700011I03Rik-204ENSMUST00000135806 831 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Msh4Q99MT2 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC6.92□□□□□ -1.3
Msh4Q99MT2 Gm25180-201ENSMUST00000157746 115 ntBASIC6.92□□□□□ -1.3
Msh4Q99MT2 Gm22882-201ENSMUST00000157749 124 ntBASIC6.92□□□□□ -1.3
Msh4Q99MT2 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Msh4Q99MT2 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Msh4Q99MT2 Gm26179-201ENSMUST00000177723 132 ntBASIC6.92□□□□□ -1.3
Msh4Q99MT2 Gm26729-201ENSMUST00000180744 352 ntBASIC6.92□□□□□ -1.3
Msh4Q99MT2 1700022N22Rik-201ENSMUST00000180932 709 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Msh4Q99MT2 4930471M09Rik-201ENSMUST00000181849 1112 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Msh4Q99MT2 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC6.92□□□□□ -1.3
Msh4Q99MT2 Gm34342-201ENSMUST00000192139 335 ntTSL 3 BASIC6.92□□□□□ -1.3
Msh4Q99MT2 Gm7341-201ENSMUST00000192183 926 ntBASIC6.92□□□□□ -1.3
Msh4Q99MT2 Gm17965-201ENSMUST00000193904 517 ntBASIC6.92□□□□□ -1.3
Msh4Q99MT2 Gm37901-201ENSMUST00000195107 514 ntBASIC6.92□□□□□ -1.3
Msh4Q99MT2 Gm42464-202ENSMUST00000198111 774 ntBASIC6.92□□□□□ -1.3
Msh4Q99MT2 Gm42734-201ENSMUST00000201656 878 ntBASIC6.92□□□□□ -1.3
Msh4Q99MT2 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Msh4Q99MT2 Gm44252-201ENSMUST00000204187 330 ntBASIC6.92□□□□□ -1.3
Msh4Q99MT2 Gm45181-201ENSMUST00000207878 449 ntTSL 3 BASIC6.92□□□□□ -1.3
Msh4Q99MT2 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC6.92□□□□□ -1.3
Msh4Q99MT2 AC131117.1-201ENSMUST00000225154 1171 ntBASIC6.92□□□□□ -1.3
Msh4Q99MT2 AC134869.2-201ENSMUST00000225788 421 ntBASIC6.92□□□□□ -1.3
Msh4Q99MT2 AC158954.1-201ENSMUST00000228272 1006 ntBASIC6.92□□□□□ -1.3
Msh4Q99MT2 Olfr49-201ENSMUST00000059996 1030 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Msh4Q99MT2 Olfr539-201ENSMUST00000078967 960 ntAPPRIS P2 BASIC6.92□□□□□ -1.3
Msh4Q99MT2 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
Msh4Q99MT2 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC6.92□□□□□ -1.3
Msh4Q99MT2 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC6.92□□□□□ -1.3
Msh4Q99MT2 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Msh4Q99MT2 Gm9575-201ENSMUST00000122140 1339 ntBASIC6.92□□□□□ -1.3
Msh4Q99MT2 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC6.92□□□□□ -1.3
Msh4Q99MT2 Gm40778-201ENSMUST00000217825 1344 ntBASIC6.92□□□□□ -1.3
Msh4Q99MT2 Klf5-202ENSMUST00000226784 2852 ntBASIC6.92□□□□□ -1.3
Msh4Q99MT2 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Msh4Q99MT2 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Msh4Q99MT2 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Msh4Q99MT2 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Msh4Q99MT2 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Msh4Q99MT2 Olfr1085-202ENSMUST00000213279 5191 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Msh4Q99MT2 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Msh4Q99MT2 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Msh4Q99MT2 Eya4-202ENSMUST00000092665 5304 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Msh4Q99MT2 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC6.91□□□□□ -1.3
Msh4Q99MT2 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
Msh4Q99MT2 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC6.91□□□□□ -1.3
Msh4Q99MT2 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC6.91□□□□□ -1.3
Msh4Q99MT2 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Msh4Q99MT2 Gm26945-201ENSMUST00000183191 2011 ntBASIC6.91□□□□□ -1.3
Msh4Q99MT2 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Msh4Q99MT2 AC154368.2-201ENSMUST00000222334 1724 ntBASIC6.91□□□□□ -1.3
Msh4Q99MT2 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC6.91□□□□□ -1.3
Msh4Q99MT2 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Msh4Q99MT2 Igkv12-44-201ENSMUST00000103367 401 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Msh4Q99MT2 Gm25757-201ENSMUST00000103986 123 ntBASIC6.91□□□□□ -1.3
Msh4Q99MT2 Uros-202ENSMUST00000106144 1045 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Msh4Q99MT2 Apoa2-202ENSMUST00000111319 458 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
Msh4Q99MT2 Gm8662-201ENSMUST00000118644 574 ntBASIC6.91□□□□□ -1.3
Msh4Q99MT2 Gm11320-201ENSMUST00000119434 463 ntBASIC6.91□□□□□ -1.3
Msh4Q99MT2 Gm11945-201ENSMUST00000120551 476 ntBASIC6.91□□□□□ -1.3
Msh4Q99MT2 Gm11263-201ENSMUST00000121853 749 ntBASIC6.91□□□□□ -1.3
Msh4Q99MT2 Gm2735-201ENSMUST00000136133 277 ntBASIC6.91□□□□□ -1.3
Msh4Q99MT2 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC6.91□□□□□ -1.3
Msh4Q99MT2 Gm22795-201ENSMUST00000157233 118 ntBASIC6.91□□□□□ -1.3
Msh4Q99MT2 Gm23207-201ENSMUST00000158665 102 ntBASIC6.91□□□□□ -1.3
Msh4Q99MT2 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC6.91□□□□□ -1.3
Msh4Q99MT2 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC6.91□□□□□ -1.3
Msh4Q99MT2 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Msh4Q99MT2 Pea15b-201ENSMUST00000182806 387 ntBASIC6.91□□□□□ -1.3
Msh4Q99MT2 Mir8094-201ENSMUST00000183361 117 ntBASIC6.91□□□□□ -1.3
Msh4Q99MT2 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Msh4Q99MT2 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Msh4Q99MT2 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC6.91□□□□□ -1.3
Msh4Q99MT2 Gm43192-201ENSMUST00000198002 637 ntTSL 3 BASIC6.91□□□□□ -1.3
Msh4Q99MT2 Gm42804-201ENSMUST00000199701 178 ntBASIC6.91□□□□□ -1.3
Msh4Q99MT2 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC6.91□□□□□ -1.3
Msh4Q99MT2 Gm44258-201ENSMUST00000204925 301 ntBASIC6.91□□□□□ -1.3
Msh4Q99MT2 Gm7972-201ENSMUST00000208434 1137 ntBASIC6.91□□□□□ -1.3
Msh4Q99MT2 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC6.91□□□□□ -1.3
Msh4Q99MT2 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC6.91□□□□□ -1.3
Msh4Q99MT2 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC6.91□□□□□ -1.3
Msh4Q99MT2 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC6.91□□□□□ -1.3
Msh4Q99MT2 Odf3l1-202ENSMUST00000215694 1212 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Msh4Q99MT2 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC6.91□□□□□ -1.3
Msh4Q99MT2 AC120002.1-201ENSMUST00000218456 331 ntBASIC6.91□□□□□ -1.3
Msh4Q99MT2 4930503E24Rik-202ENSMUST00000219657 942 ntBASIC6.91□□□□□ -1.3
Msh4Q99MT2 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC6.91□□□□□ -1.3
Msh4Q99MT2 Bglap3-201ENSMUST00000075523 717 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Msh4Q99MT2 n-R5s60-201ENSMUST00000083299 119 ntBASIC6.91□□□□□ -1.3
Msh4Q99MT2 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Msh4Q99MT2 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 94.5 ms