Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 AC163296.1-201ENSMUST00000220004 1266 ntBASIC8.23□□□□□ -1.09
Clp1Q99LI9 AC158981.1-201ENSMUST00000226943 1205 ntBASIC8.23□□□□□ -1.09
Clp1Q99LI9 Cfap126-201ENSMUST00000027959 1034 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Clp1Q99LI9 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Clp1Q99LI9 Gm10247-201ENSMUST00000090395 333 ntBASIC8.23□□□□□ -1.09
Clp1Q99LI9 AC125095.1-201ENSMUST00000228387 2020 ntBASIC8.23□□□□□ -1.09
Clp1Q99LI9 4933427D14Rik-201ENSMUST00000108505 1495 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Clp1Q99LI9 Olfr455-202ENSMUST00000217978 4054 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Clp1Q99LI9 Gm13081-201ENSMUST00000121527 5599 ntBASIC8.23□□□□□ -1.09
Clp1Q99LI9 Trpm3-201ENSMUST00000037901 5082 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Clp1Q99LI9 Tgs1-201ENSMUST00000052712 4327 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Clp1Q99LI9 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Clp1Q99LI9 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Clp1Q99LI9 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Clp1Q99LI9 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Clp1Q99LI9 Etl4-203ENSMUST00000114604 4786 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Clp1Q99LI9 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC8.23□□□□□ -1.09
Clp1Q99LI9 Fbxo11-201ENSMUST00000005504 4019 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Clp1Q99LI9 Naip1-204ENSMUST00000222155 5361 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Clp1Q99LI9 Atp6v1a-202ENSMUST00000114666 4234 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Clp1Q99LI9 Fam160a1-202ENSMUST00000118408 4445 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Clp1Q99LI9 Scd3-201ENSMUST00000026220 3470 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Clp1Q99LI9 Inpp5d-209ENSMUST00000168783 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Clp1Q99LI9 Rpgr-203ENSMUST00000073392 2926 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
Clp1Q99LI9 Nol12-203ENSMUST00000138880 3717 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Clp1Q99LI9 Acaca-201ENSMUST00000020843 9026 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Clp1Q99LI9 Gm232-201ENSMUST00000216549 2559 ntBASIC8.22□□□□□ -1.09
Clp1Q99LI9 Ndst3-207ENSMUST00000172537 3152 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Clp1Q99LI9 A530058O07Rik-201ENSMUST00000222059 3364 ntBASIC8.22□□□□□ -1.09
Clp1Q99LI9 CT009711.1-201ENSMUST00000223992 3040 ntBASIC8.22□□□□□ -1.09
Clp1Q99LI9 Lingo2-204ENSMUST00000108124 2414 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Clp1Q99LI9 Olfr1532-ps1-202ENSMUST00000207492 2414 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
Clp1Q99LI9 Olfr1532-ps1-203ENSMUST00000215949 2439 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Clp1Q99LI9 Wipf3-205ENSMUST00000163746 4102 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Clp1Q99LI9 Paics-202ENSMUST00000117536 1862 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Clp1Q99LI9 Adgrb3-205ENSMUST00000135518 5432 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Clp1Q99LI9 Kidins220-210ENSMUST00000222941 6277 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Clp1Q99LI9 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Clp1Q99LI9 Cltc-202ENSMUST00000103186 6519 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Clp1Q99LI9 Cdh8-207ENSMUST00000155527 3159 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Clp1Q99LI9 Ghitm-202ENSMUST00000165649 3188 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Clp1Q99LI9 Igkv9-123-201ENSMUST00000103313 377 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Clp1Q99LI9 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Clp1Q99LI9 Defa-ps7-201ENSMUST00000117139 168 ntBASIC8.22□□□□□ -1.09
Clp1Q99LI9 Gm14906-201ENSMUST00000119265 390 ntBASIC8.22□□□□□ -1.09
Clp1Q99LI9 Gm15030-201ENSMUST00000119804 484 ntBASIC8.22□□□□□ -1.09
Clp1Q99LI9 Gm15481-201ENSMUST00000120264 539 ntBASIC8.22□□□□□ -1.09
Clp1Q99LI9 Pla2g2a-203ENSMUST00000135748 788 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Clp1Q99LI9 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC8.22□□□□□ -1.09
Clp1Q99LI9 Gm17043-201ENSMUST00000164621 1283 ntBASIC8.22□□□□□ -1.09
Clp1Q99LI9 Gm7244-201ENSMUST00000164658 455 ntBASIC8.22□□□□□ -1.09
Clp1Q99LI9 Gm8895-201ENSMUST00000172300 1223 ntBASIC8.22□□□□□ -1.09
Clp1Q99LI9 Mocs2-212ENSMUST00000184214 551 ntTSL 3 BASIC8.22□□□□□ -1.09
Clp1Q99LI9 Mir6398-201ENSMUST00000184541 102 ntBASIC8.22□□□□□ -1.09
Clp1Q99LI9 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Clp1Q99LI9 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Clp1Q99LI9 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC8.22□□□□□ -1.09
Clp1Q99LI9 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC8.22□□□□□ -1.09
Clp1Q99LI9 Gm43308-201ENSMUST00000197236 373 ntBASIC8.22□□□□□ -1.09
Clp1Q99LI9 Gm43786-202ENSMUST00000202157 616 ntTSL 3 BASIC8.22□□□□□ -1.09
Clp1Q99LI9 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC8.22□□□□□ -1.09
Clp1Q99LI9 Gm44972-201ENSMUST00000206419 406 ntBASIC8.22□□□□□ -1.09
Clp1Q99LI9 Olfr97-202ENSMUST00000207414 933 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Clp1Q99LI9 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC8.22□□□□□ -1.09
Clp1Q99LI9 Gm35520-201ENSMUST00000209235 784 ntTSL 5 BASIC8.22□□□□□ -1.09
Clp1Q99LI9 Gm45446-201ENSMUST00000209348 216 ntBASIC8.22□□□□□ -1.09
Clp1Q99LI9 Gm7499-201ENSMUST00000210423 813 ntBASIC8.22□□□□□ -1.09
Clp1Q99LI9 Gm32052-201ENSMUST00000212073 799 ntTSL 5 BASIC8.22□□□□□ -1.09
Clp1Q99LI9 AC122372.1-201ENSMUST00000215344 280 ntBASIC8.22□□□□□ -1.09
Clp1Q99LI9 Gm36827-201ENSMUST00000220080 1249 ntTSL 5 BASIC8.22□□□□□ -1.09
Clp1Q99LI9 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Clp1Q99LI9 AC113031.6-202ENSMUST00000228468 1145 ntBASIC8.22□□□□□ -1.09
Clp1Q99LI9 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Clp1Q99LI9 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Clp1Q99LI9 Sh2d2a-201ENSMUST00000029709 4484 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
Clp1Q99LI9 Wdhd1-204ENSMUST00000187531 4260 ntAPPRIS P5 TSL 5 BASIC8.22□□□□□ -1.09
Clp1Q99LI9 Gm42611-201ENSMUST00000199446 3407 ntBASIC8.22□□□□□ -1.09
Clp1Q99LI9 Olfr119-202ENSMUST00000213732 1722 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Clp1Q99LI9 Cwc22-201ENSMUST00000065889 3471 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
Clp1Q99LI9 Gm45746-201ENSMUST00000212623 2447 ntBASIC8.22□□□□□ -1.09
Clp1Q99LI9 AC164437.4-202ENSMUST00000228794 2413 ntBASIC8.22□□□□□ -1.09
Clp1Q99LI9 Gm10307-201ENSMUST00000189839 1337 ntBASIC8.22□□□□□ -1.09
Clp1Q99LI9 Ece2-207ENSMUST00000079600 3349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Clp1Q99LI9 Vmn1r40-204ENSMUST00000228485 2689 ntBASIC8.22□□□□□ -1.09
Clp1Q99LI9 Pnma2-202ENSMUST00000122431 3143 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Clp1Q99LI9 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Clp1Q99LI9 AC123629.1-201ENSMUST00000225669 1364 ntBASIC8.22□□□□□ -1.09
Clp1Q99LI9 Pdzd2-201ENSMUST00000075317 10756 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Clp1Q99LI9 Gm43279-201ENSMUST00000202376 2512 ntBASIC8.22□□□□□ -1.09
Clp1Q99LI9 Gm26719-201ENSMUST00000180395 3220 ntTSL 5 BASIC8.22□□□□□ -1.09
Clp1Q99LI9 Hypk-202ENSMUST00000110612 4170 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
Clp1Q99LI9 Gdpgp1-201ENSMUST00000062915 4189 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Clp1Q99LI9 Gm38043-201ENSMUST00000195501 5141 ntBASIC8.21□□□□□ -1.09
Clp1Q99LI9 Plscr2-201ENSMUST00000034932 1874 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Clp1Q99LI9 Caps2-201ENSMUST00000092176 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
Clp1Q99LI9 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC8.21□□□□□ -1.09
Clp1Q99LI9 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Clp1Q99LI9 Cops2-203ENSMUST00000110463 3392 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Clp1Q99LI9 Dpy19l3-201ENSMUST00000051377 8006 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Clp1Q99LI9 4933411E06Rik-201ENSMUST00000186016 1493 ntBASIC8.21□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms