Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Gm45282-201ENSMUST00000209439 681 ntTSL 3 BASIC8.67□□□□□ -1.02
Sf3a1Q8K4Z5 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Sf3a1Q8K4Z5 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Sf3a1Q8K4Z5 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Sf3a1Q8K4Z5 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Sf3a1Q8K4Z5 Gm46424-201ENSMUST00000221567 168 ntBASIC8.67□□□□□ -1.02
Sf3a1Q8K4Z5 9330199G10Rik-201ENSMUST00000221601 2072 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Sf3a1Q8K4Z5 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Sf3a1Q8K4Z5 AC091783.1-201ENSMUST00000223614 1613 ntBASIC8.67□□□□□ -1.02
Sf3a1Q8K4Z5 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Sf3a1Q8K4Z5 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Sf3a1Q8K4Z5 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Sf3a1Q8K4Z5 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Sf3a1Q8K4Z5 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC8.67□□□□□ -1.02
Sf3a1Q8K4Z5 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
Sf3a1Q8K4Z5 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Sf3a1Q8K4Z5 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC8.67□□□□□ -1.02
Sf3a1Q8K4Z5 Gm37410-201ENSMUST00000193623 3039 ntBASIC8.67□□□□□ -1.02
Sf3a1Q8K4Z5 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Sf3a1Q8K4Z5 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Sf3a1Q8K4Z5 Gm10743-201ENSMUST00000219611 2358 ntBASIC8.66□□□□□ -1.02
Sf3a1Q8K4Z5 Btnl10-202ENSMUST00000069941 4400 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Sf3a1Q8K4Z5 5330413P13Rik-203ENSMUST00000150466 2173 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Sf3a1Q8K4Z5 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Sf3a1Q8K4Z5 Gm29761-201ENSMUST00000215964 1939 ntBASIC8.66□□□□□ -1.02
Sf3a1Q8K4Z5 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Sf3a1Q8K4Z5 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Sf3a1Q8K4Z5 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Sf3a1Q8K4Z5 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Sf3a1Q8K4Z5 Gm43526-201ENSMUST00000196666 1565 ntBASIC8.66□□□□□ -1.02
Sf3a1Q8K4Z5 Gm13196-201ENSMUST00000118297 379 ntBASIC8.66□□□□□ -1.02
Sf3a1Q8K4Z5 Gm14587-201ENSMUST00000121714 658 ntBASIC8.66□□□□□ -1.02
Sf3a1Q8K4Z5 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC8.66□□□□□ -1.02
Sf3a1Q8K4Z5 AC122263.2-201ENSMUST00000145909 586 ntTSL 3 BASIC8.66□□□□□ -1.02
Sf3a1Q8K4Z5 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC8.66□□□□□ -1.02
Sf3a1Q8K4Z5 Gm24369-201ENSMUST00000175387 96 ntBASIC8.66□□□□□ -1.02
Sf3a1Q8K4Z5 Gm37669-201ENSMUST00000192184 820 ntBASIC8.66□□□□□ -1.02
Sf3a1Q8K4Z5 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC8.66□□□□□ -1.02
Sf3a1Q8K4Z5 Gm45181-201ENSMUST00000207878 449 ntTSL 3 BASIC8.66□□□□□ -1.02
Sf3a1Q8K4Z5 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC8.66□□□□□ -1.02
Sf3a1Q8K4Z5 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Sf3a1Q8K4Z5 AC122539.1-201ENSMUST00000219925 329 ntBASIC8.66□□□□□ -1.02
Sf3a1Q8K4Z5 AC160863.3-201ENSMUST00000220129 1228 ntTSL 5 BASIC8.66□□□□□ -1.02
Sf3a1Q8K4Z5 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Sf3a1Q8K4Z5 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Sf3a1Q8K4Z5 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC8.66□□□□□ -1.02
Sf3a1Q8K4Z5 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Sf3a1Q8K4Z5 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Sf3a1Q8K4Z5 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Sf3a1Q8K4Z5 Gm30165-201ENSMUST00000218769 1961 ntTSL 5 BASIC8.66□□□□□ -1.02
Sf3a1Q8K4Z5 Gm6101-201ENSMUST00000195384 1867 ntBASIC8.66□□□□□ -1.02
Sf3a1Q8K4Z5 AC122356.1-202ENSMUST00000227328 2758 ntBASIC8.66□□□□□ -1.02
Sf3a1Q8K4Z5 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC8.66□□□□□ -1.02
Sf3a1Q8K4Z5 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Sf3a1Q8K4Z5 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Sf3a1Q8K4Z5 Erbin-202ENSMUST00000053927 6103 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Sf3a1Q8K4Z5 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Sf3a1Q8K4Z5 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Sf3a1Q8K4Z5 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Sf3a1Q8K4Z5 AC135119.1-202ENSMUST00000228435 2203 ntBASIC8.65□□□□□ -1.02
Sf3a1Q8K4Z5 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Sf3a1Q8K4Z5 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC8.65□□□□□ -1.02
Sf3a1Q8K4Z5 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
Sf3a1Q8K4Z5 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Sf3a1Q8K4Z5 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Sf3a1Q8K4Z5 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC8.65□□□□□ -1.02
Sf3a1Q8K4Z5 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Sf3a1Q8K4Z5 Gm10650-202ENSMUST00000196581 1969 ntBASIC8.65□□□□□ -1.02
Sf3a1Q8K4Z5 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC8.65□□□□□ -1.02
Sf3a1Q8K4Z5 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Sf3a1Q8K4Z5 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC8.65□□□□□ -1.02
Sf3a1Q8K4Z5 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC8.65□□□□□ -1.02
Sf3a1Q8K4Z5 Gm6743-201ENSMUST00000117345 1066 ntBASIC8.65□□□□□ -1.02
Sf3a1Q8K4Z5 H2-Ea-ps-201ENSMUST00000134042 686 ntBASIC8.65□□□□□ -1.02
Sf3a1Q8K4Z5 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Sf3a1Q8K4Z5 Gm11423-202ENSMUST00000152784 686 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Sf3a1Q8K4Z5 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Sf3a1Q8K4Z5 Gm24228-201ENSMUST00000158829 129 ntBASIC8.65□□□□□ -1.02
Sf3a1Q8K4Z5 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Sf3a1Q8K4Z5 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Sf3a1Q8K4Z5 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Sf3a1Q8K4Z5 Gm8332-201ENSMUST00000179468 435 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Sf3a1Q8K4Z5 Gm2035-201ENSMUST00000180053 435 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Sf3a1Q8K4Z5 Gm28580-201ENSMUST00000186767 88 ntBASIC8.65□□□□□ -1.02
Sf3a1Q8K4Z5 Gm29214-201ENSMUST00000190216 570 ntBASIC8.65□□□□□ -1.02
Sf3a1Q8K4Z5 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC8.65□□□□□ -1.02
Sf3a1Q8K4Z5 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Sf3a1Q8K4Z5 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC8.65□□□□□ -1.02
Sf3a1Q8K4Z5 Gm9604-201ENSMUST00000211175 433 ntBASIC8.65□□□□□ -1.02
Sf3a1Q8K4Z5 Spata19-204ENSMUST00000214287 642 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Sf3a1Q8K4Z5 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Sf3a1Q8K4Z5 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Sf3a1Q8K4Z5 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Sf3a1Q8K4Z5 Smim15-203ENSMUST00000224361 830 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Sf3a1Q8K4Z5 4932702P03Rik-203ENSMUST00000225028 670 ntBASIC8.65□□□□□ -1.02
Sf3a1Q8K4Z5 CT009711.4-201ENSMUST00000225685 198 ntBASIC8.65□□□□□ -1.02
Sf3a1Q8K4Z5 AC130219.2-201ENSMUST00000228765 807 ntBASIC8.65□□□□□ -1.02
Sf3a1Q8K4Z5 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Sf3a1Q8K4Z5 Gpr15-201ENSMUST00000089318 1290 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Sf3a1Q8K4Z5 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 164.6 ms