Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Mcm10-201ENSMUST00000027980 3494 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Clrn1Q8K445 U2surp-209ENSMUST00000217176 3111 ntTSL 5 BASIC6.92□□□□□ -1.3
Clrn1Q8K445 Arhgap17-201ENSMUST00000098060 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Clrn1Q8K445 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Clrn1Q8K445 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC6.92□□□□□ -1.3
Clrn1Q8K445 Trpm8-204ENSMUST00000171176 3723 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Clrn1Q8K445 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Clrn1Q8K445 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC6.92□□□□□ -1.3
Clrn1Q8K445 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Clrn1Q8K445 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Clrn1Q8K445 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
Clrn1Q8K445 Gm6787-201ENSMUST00000123120 1454 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Clrn1Q8K445 Gm37952-202ENSMUST00000192516 1497 ntTSL 5 BASIC6.92□□□□□ -1.3
Clrn1Q8K445 Gm42969-201ENSMUST00000199858 3631 ntBASIC6.91□□□□□ -1.3
Clrn1Q8K445 Gm6786-201ENSMUST00000203165 1915 ntBASIC6.91□□□□□ -1.3
Clrn1Q8K445 Hdac9-204ENSMUST00000209750 3204 ntAPPRIS P5 TSL 5 BASIC6.91□□□□□ -1.3
Clrn1Q8K445 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Clrn1Q8K445 Phyhipl-206ENSMUST00000162251 1540 ntTSL 3 BASIC6.91□□□□□ -1.3
Clrn1Q8K445 Mllt3-202ENSMUST00000126353 1956 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Clrn1Q8K445 Klf5-202ENSMUST00000226784 2852 ntBASIC6.91□□□□□ -1.3
Clrn1Q8K445 Osbpl9-201ENSMUST00000030288 2871 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Clrn1Q8K445 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC6.91□□□□□ -1.3
Clrn1Q8K445 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC6.91□□□□□ -1.3
Clrn1Q8K445 Pdgfd-201ENSMUST00000058692 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Clrn1Q8K445 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Clrn1Q8K445 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC6.91□□□□□ -1.3
Clrn1Q8K445 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Clrn1Q8K445 Gm43429-201ENSMUST00000197889 2251 ntBASIC6.91□□□□□ -1.3
Clrn1Q8K445 Redrum-201ENSMUST00000181269 1774 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Clrn1Q8K445 Gm25725-201ENSMUST00000104528 130 ntBASIC6.91□□□□□ -1.3
Clrn1Q8K445 Gm14480-201ENSMUST00000118521 433 ntBASIC6.91□□□□□ -1.3
Clrn1Q8K445 Gm16418-201ENSMUST00000118577 171 ntBASIC6.91□□□□□ -1.3
Clrn1Q8K445 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC6.91□□□□□ -1.3
Clrn1Q8K445 Gm5255-201ENSMUST00000120125 642 ntBASIC6.91□□□□□ -1.3
Clrn1Q8K445 Gm11945-201ENSMUST00000120551 476 ntBASIC6.91□□□□□ -1.3
Clrn1Q8K445 Gm24893-201ENSMUST00000122745 369 ntBASIC6.91□□□□□ -1.3
Clrn1Q8K445 Gm12911-201ENSMUST00000140639 703 ntTSL 3 BASIC6.91□□□□□ -1.3
Clrn1Q8K445 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Clrn1Q8K445 Gm3008-201ENSMUST00000160566 571 ntBASIC6.91□□□□□ -1.3
Clrn1Q8K445 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Clrn1Q8K445 Gm7991-201ENSMUST00000168668 591 ntBASIC6.91□□□□□ -1.3
Clrn1Q8K445 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Clrn1Q8K445 Gm20430-201ENSMUST00000172474 207 ntBASIC6.91□□□□□ -1.3
Clrn1Q8K445 Gm2539-203ENSMUST00000181352 746 ntBASIC6.91□□□□□ -1.3
Clrn1Q8K445 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC6.91□□□□□ -1.3
Clrn1Q8K445 Gm20918-202ENSMUST00000188637 1227 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Clrn1Q8K445 Gm38214-201ENSMUST00000192581 988 ntBASIC6.91□□□□□ -1.3
Clrn1Q8K445 Gm35108-201ENSMUST00000194321 699 ntBASIC6.91□□□□□ -1.3
Clrn1Q8K445 Gm37993-201ENSMUST00000195301 988 ntBASIC6.91□□□□□ -1.3
Clrn1Q8K445 Gm37585-201ENSMUST00000195440 280 ntBASIC6.91□□□□□ -1.3
Clrn1Q8K445 Gm33191-201ENSMUST00000195604 699 ntBASIC6.91□□□□□ -1.3
Clrn1Q8K445 C920008G01Rik-201ENSMUST00000196756 380 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Clrn1Q8K445 Gm42926-201ENSMUST00000200496 697 ntBASIC6.91□□□□□ -1.3
Clrn1Q8K445 Gm44192-201ENSMUST00000204195 556 ntBASIC6.91□□□□□ -1.3
Clrn1Q8K445 Gm44621-201ENSMUST00000207643 1166 ntTSL 3 BASIC6.91□□□□□ -1.3
Clrn1Q8K445 Gm18562-201ENSMUST00000209949 915 ntBASIC6.91□□□□□ -1.3
Clrn1Q8K445 Gm45432-201ENSMUST00000210391 416 ntBASIC6.91□□□□□ -1.3
Clrn1Q8K445 Gm45636-201ENSMUST00000210497 1064 ntBASIC6.91□□□□□ -1.3
Clrn1Q8K445 Gm9110-201ENSMUST00000219035 617 ntBASIC6.91□□□□□ -1.3
Clrn1Q8K445 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC6.91□□□□□ -1.3
Clrn1Q8K445 Gm36719-201ENSMUST00000219518 927 ntTSL 5 BASIC6.91□□□□□ -1.3
Clrn1Q8K445 4930556J24Rik-201ENSMUST00000042344 1220 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Clrn1Q8K445 Olfr448-201ENSMUST00000058668 933 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Clrn1Q8K445 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Clrn1Q8K445 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Clrn1Q8K445 Olfr224-201ENSMUST00000081102 945 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Clrn1Q8K445 Mir350-201ENSMUST00000083639 99 ntBASIC6.91□□□□□ -1.3
Clrn1Q8K445 Vmn2r-ps99-202ENSMUST00000223517 2338 ntBASIC6.91□□□□□ -1.3
Clrn1Q8K445 Gm26856-201ENSMUST00000181919 1349 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Clrn1Q8K445 Gm44897-201ENSMUST00000206187 1341 ntBASIC6.91□□□□□ -1.3
Clrn1Q8K445 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC6.91□□□□□ -1.3
Clrn1Q8K445 CT025639.1-201ENSMUST00000223906 1375 ntBASIC6.91□□□□□ -1.3
Clrn1Q8K445 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Clrn1Q8K445 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC6.91□□□□□ -1.3
Clrn1Q8K445 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Clrn1Q8K445 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Clrn1Q8K445 Gm11282-201ENSMUST00000119018 1416 ntBASIC6.91□□□□□ -1.3
Clrn1Q8K445 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Clrn1Q8K445 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Clrn1Q8K445 AC107453.1-201ENSMUST00000227490 3268 ntBASIC6.91□□□□□ -1.3
Clrn1Q8K445 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC6.91□□□□□ -1.3
Clrn1Q8K445 Gm9521-201ENSMUST00000206656 1516 ntBASIC6.91□□□□□ -1.3
Clrn1Q8K445 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Clrn1Q8K445 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Clrn1Q8K445 Olfr701-201ENSMUST00000075414 3063 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Clrn1Q8K445 Gm12608-201ENSMUST00000122013 1715 ntBASIC6.9□□□□□ -1.3
Clrn1Q8K445 Gm26545-201ENSMUST00000181082 1746 ntTSL 5 BASIC6.9□□□□□ -1.3
Clrn1Q8K445 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
Clrn1Q8K445 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
Clrn1Q8K445 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Clrn1Q8K445 Zfp143-204ENSMUST00000209505 2693 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Clrn1Q8K445 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Clrn1Q8K445 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Clrn1Q8K445 9530036M11Rik-201ENSMUST00000138767 1996 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Clrn1Q8K445 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Clrn1Q8K445 Trmt10b-201ENSMUST00000044673 2064 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Clrn1Q8K445 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Clrn1Q8K445 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Clrn1Q8K445 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Clrn1Q8K445 Gm12710-201ENSMUST00000119011 216 ntBASIC6.9□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 177.4 ms