Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC8.46□□□□□ -1.05
Brf1Q8CFK2 AC164437.5-201ENSMUST00000227235 4414 ntBASIC8.46□□□□□ -1.05
Brf1Q8CFK2 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.05
Brf1Q8CFK2 D430020J02Rik-201ENSMUST00000220477 2941 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Brf1Q8CFK2 Gm22774-201ENSMUST00000102084 109 ntBASIC8.46□□□□□ -1.06
Brf1Q8CFK2 Gm25631-201ENSMUST00000104390 130 ntBASIC8.46□□□□□ -1.06
Brf1Q8CFK2 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Brf1Q8CFK2 Gm11903-201ENSMUST00000118958 727 ntBASIC8.46□□□□□ -1.06
Brf1Q8CFK2 Rpl36-ps7-201ENSMUST00000119462 315 ntBASIC8.46□□□□□ -1.06
Brf1Q8CFK2 Gm12104-201ENSMUST00000120359 979 ntBASIC8.46□□□□□ -1.06
Brf1Q8CFK2 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC8.46□□□□□ -1.06
Brf1Q8CFK2 Gm24442-201ENSMUST00000157238 327 ntBASIC8.46□□□□□ -1.06
Brf1Q8CFK2 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Brf1Q8CFK2 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
Brf1Q8CFK2 Gm27238-201ENSMUST00000185180 417 ntTSL 3 BASIC8.46□□□□□ -1.06
Brf1Q8CFK2 Gm28580-201ENSMUST00000186767 88 ntBASIC8.46□□□□□ -1.06
Brf1Q8CFK2 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Brf1Q8CFK2 Gm7512-201ENSMUST00000195217 1170 ntBASIC8.46□□□□□ -1.06
Brf1Q8CFK2 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC8.46□□□□□ -1.06
Brf1Q8CFK2 Gm2860-201ENSMUST00000199226 707 ntBASIC8.46□□□□□ -1.06
Brf1Q8CFK2 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC8.46□□□□□ -1.06
Brf1Q8CFK2 CT009711.2-202ENSMUST00000224538 973 ntBASIC8.46□□□□□ -1.06
Brf1Q8CFK2 AC124489.1-201ENSMUST00000225852 526 ntBASIC8.46□□□□□ -1.06
Brf1Q8CFK2 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Brf1Q8CFK2 Olfr1448-201ENSMUST00000054737 945 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Brf1Q8CFK2 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Brf1Q8CFK2 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Brf1Q8CFK2 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Brf1Q8CFK2 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Brf1Q8CFK2 AC159264.1-202ENSMUST00000224856 3162 ntBASIC8.46□□□□□ -1.06
Brf1Q8CFK2 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
Brf1Q8CFK2 Gm44704-201ENSMUST00000208963 1990 ntBASIC8.46□□□□□ -1.06
Brf1Q8CFK2 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC8.46□□□□□ -1.06
Brf1Q8CFK2 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Brf1Q8CFK2 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Brf1Q8CFK2 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Brf1Q8CFK2 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC8.45□□□□□ -1.06
Brf1Q8CFK2 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Brf1Q8CFK2 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC8.45□□□□□ -1.06
Brf1Q8CFK2 9430098F02Rik-201ENSMUST00000180832 2986 ntTSL 5 BASIC8.45□□□□□ -1.06
Brf1Q8CFK2 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Brf1Q8CFK2 Trpm8-202ENSMUST00000113114 4112 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Brf1Q8CFK2 AC153955.2-201ENSMUST00000216739 4129 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Brf1Q8CFK2 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Brf1Q8CFK2 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Brf1Q8CFK2 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC8.45□□□□□ -1.06
Brf1Q8CFK2 Gm14904-201ENSMUST00000117067 335 ntBASIC8.45□□□□□ -1.06
Brf1Q8CFK2 Gm13260-201ENSMUST00000117797 1264 ntBASIC8.45□□□□□ -1.06
Brf1Q8CFK2 Gm16044-201ENSMUST00000118475 450 ntBASIC8.45□□□□□ -1.06
Brf1Q8CFK2 Gm15081-201ENSMUST00000119794 844 ntBASIC8.45□□□□□ -1.06
Brf1Q8CFK2 Gm12903-201ENSMUST00000121015 544 ntBASIC8.45□□□□□ -1.06
Brf1Q8CFK2 Cox7c-203ENSMUST00000131011 540 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Brf1Q8CFK2 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC8.45□□□□□ -1.06
Brf1Q8CFK2 Gm3326-201ENSMUST00000164656 1043 ntBASIC8.45□□□□□ -1.06
Brf1Q8CFK2 Gm25640-201ENSMUST00000175378 125 ntBASIC8.45□□□□□ -1.06
Brf1Q8CFK2 Gm6489-201ENSMUST00000178167 696 ntBASIC8.45□□□□□ -1.06
Brf1Q8CFK2 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Brf1Q8CFK2 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Brf1Q8CFK2 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Brf1Q8CFK2 Gm37490-201ENSMUST00000195566 724 ntBASIC8.45□□□□□ -1.06
Brf1Q8CFK2 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
Brf1Q8CFK2 Gm45282-201ENSMUST00000209439 681 ntTSL 3 BASIC8.45□□□□□ -1.06
Brf1Q8CFK2 4930465I24Rik-201ENSMUST00000209697 426 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Brf1Q8CFK2 Odf3l1-202ENSMUST00000215694 1212 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Brf1Q8CFK2 Gm5119-201ENSMUST00000215858 634 ntBASIC8.45□□□□□ -1.06
Brf1Q8CFK2 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Brf1Q8CFK2 AC127242.3-201ENSMUST00000222009 580 ntBASIC8.45□□□□□ -1.06
Brf1Q8CFK2 AC165157.1-201ENSMUST00000222981 580 ntBASIC8.45□□□□□ -1.06
Brf1Q8CFK2 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Brf1Q8CFK2 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Brf1Q8CFK2 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Brf1Q8CFK2 Zfp626-202ENSMUST00000205671 5329 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Brf1Q8CFK2 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Brf1Q8CFK2 Gm18248-201ENSMUST00000191164 1846 ntBASIC8.45□□□□□ -1.06
Brf1Q8CFK2 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Brf1Q8CFK2 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Olfr666-202ENSMUST00000214757 1949 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Gm9030-201ENSMUST00000218405 2410 ntBASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Gm9029-201ENSMUST00000219232 2410 ntBASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Gm14466-201ENSMUST00000119028 451 ntBASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Gm13221-201ENSMUST00000121712 430 ntBASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Gm22342-201ENSMUST00000122647 298 ntBASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Gm16248-201ENSMUST00000124238 243 ntBASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Brf1Q8CFK2 H2-Ea-ps-201ENSMUST00000134042 686 ntBASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Gm15418-201ENSMUST00000151014 677 ntTSL 5 BASIC8.44□□□□□ -1.06
Brf1Q8CFK2 Gm11423-202ENSMUST00000152784 686 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms