Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm12307-201ENSMUST00000120581 590 ntBASIC9.16□□□□□ -0.94
Col16a1Q8BLX7 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col16a1Q8BLX7 Gm17096-201ENSMUST00000172037 733 ntTSL 5 BASIC9.16□□□□□ -0.94
Col16a1Q8BLX7 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC9.16□□□□□ -0.94
Col16a1Q8BLX7 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC9.16□□□□□ -0.94
Col16a1Q8BLX7 Gm7554-201ENSMUST00000202282 574 ntBASIC9.16□□□□□ -0.94
Col16a1Q8BLX7 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC9.16□□□□□ -0.94
Col16a1Q8BLX7 Gm44911-201ENSMUST00000208436 1062 ntBASIC9.16□□□□□ -0.94
Col16a1Q8BLX7 AC132954.2-201ENSMUST00000222400 403 ntBASIC9.16□□□□□ -0.94
Col16a1Q8BLX7 AC154834.1-201ENSMUST00000224697 358 ntBASIC9.16□□□□□ -0.94
Col16a1Q8BLX7 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Col16a1Q8BLX7 Blm-202ENSMUST00000170315 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col16a1Q8BLX7 Myo15-202ENSMUST00000081823 7953 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Col16a1Q8BLX7 Gm43254-201ENSMUST00000199187 2491 ntBASIC9.15□□□□□ -0.94
Col16a1Q8BLX7 Trerf1-205ENSMUST00000190080 7045 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Col16a1Q8BLX7 Gm28055-202ENSMUST00000189576 1301 ntTSL 3 BASIC9.15□□□□□ -0.94
Col16a1Q8BLX7 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC9.15□□□□□ -0.94
Col16a1Q8BLX7 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC9.15□□□□□ -0.94
Col16a1Q8BLX7 Plp1-201ENSMUST00000033800 4699 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col16a1Q8BLX7 Wee2-201ENSMUST00000038907 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col16a1Q8BLX7 Gm5512-202ENSMUST00000220222 1522 ntBASIC9.15□□□□□ -0.94
Col16a1Q8BLX7 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC9.15□□□□□ -0.94
Col16a1Q8BLX7 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Col16a1Q8BLX7 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Col16a1Q8BLX7 Svil-203ENSMUST00000126977 7907 ntAPPRIS P3 TSL 5 BASIC9.15□□□□□ -0.94
Col16a1Q8BLX7 Siae-204ENSMUST00000215474 4947 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Col16a1Q8BLX7 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC9.15□□□□□ -0.95
Col16a1Q8BLX7 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC9.15□□□□□ -0.95
Col16a1Q8BLX7 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Col16a1Q8BLX7 Gm14712-201ENSMUST00000120195 772 ntBASIC9.15□□□□□ -0.95
Col16a1Q8BLX7 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC9.15□□□□□ -0.95
Col16a1Q8BLX7 Gm25717-201ENSMUST00000158631 353 ntBASIC9.15□□□□□ -0.95
Col16a1Q8BLX7 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC9.15□□□□□ -0.95
Col16a1Q8BLX7 Gm22655-201ENSMUST00000174949 96 ntBASIC9.15□□□□□ -0.95
Col16a1Q8BLX7 Ighv1-10-201ENSMUST00000194372 355 ntBASIC9.15□□□□□ -0.95
Col16a1Q8BLX7 Ass-ps1-201ENSMUST00000197717 761 ntBASIC9.15□□□□□ -0.95
Col16a1Q8BLX7 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC9.15□□□□□ -0.95
Col16a1Q8BLX7 Igkv4-73-201ENSMUST00000199760 358 ntBASIC9.15□□□□□ -0.95
Col16a1Q8BLX7 Olfr809-203ENSMUST00000218237 1100 ntBASIC9.15□□□□□ -0.95
Col16a1Q8BLX7 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC9.15□□□□□ -0.95
Col16a1Q8BLX7 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC9.15□□□□□ -0.95
Col16a1Q8BLX7 Gm26442-201ENSMUST00000082588 153 ntBASIC9.15□□□□□ -0.95
Col16a1Q8BLX7 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC9.15□□□□□ -0.95
Col16a1Q8BLX7 AC122828.2-201ENSMUST00000222511 2880 ntBASIC9.15□□□□□ -0.95
Col16a1Q8BLX7 Dennd6a-204ENSMUST00000224248 2775 ntBASIC9.15□□□□□ -0.95
Col16a1Q8BLX7 Pum1-204ENSMUST00000105991 4614 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Col16a1Q8BLX7 Itgb8-201ENSMUST00000026360 8403 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Col16a1Q8BLX7 C8a-203ENSMUST00000106808 3539 ntTSL 2 BASIC9.14□□□□□ -0.95
Col16a1Q8BLX7 Gm3892-202ENSMUST00000178043 3539 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Col16a1Q8BLX7 Gm10593-201ENSMUST00000178906 3539 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Col16a1Q8BLX7 Pex5l-211ENSMUST00000194016 4206 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Col16a1Q8BLX7 Map2-207ENSMUST00000114018 5303 ntAPPRIS P3 TSL 5 BASIC9.14□□□□□ -0.95
Col16a1Q8BLX7 Gm37915-201ENSMUST00000195134 3261 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Col16a1Q8BLX7 Tnc-204ENSMUST00000107377 7100 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col16a1Q8BLX7 Musk-201ENSMUST00000081919 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col16a1Q8BLX7 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col16a1Q8BLX7 Afap1l2-201ENSMUST00000111584 3597 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col16a1Q8BLX7 Sh2d2a-201ENSMUST00000029709 4484 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col16a1Q8BLX7 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC9.14□□□□□ -0.95
Col16a1Q8BLX7 Slc2a9-203ENSMUST00000067886 3602 ntAPPRIS P4 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col16a1Q8BLX7 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC9.14□□□□□ -0.95
Col16a1Q8BLX7 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Col16a1Q8BLX7 Gm7113-201ENSMUST00000120477 958 ntBASIC9.14□□□□□ -0.95
Col16a1Q8BLX7 Gm13462-201ENSMUST00000121472 961 ntBASIC9.14□□□□□ -0.95
Col16a1Q8BLX7 Gm3810-201ENSMUST00000122413 476 ntBASIC9.14□□□□□ -0.95
Col16a1Q8BLX7 Gm5970-201ENSMUST00000131638 1216 ntBASIC9.14□□□□□ -0.95
Col16a1Q8BLX7 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC9.14□□□□□ -0.95
Col16a1Q8BLX7 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Col16a1Q8BLX7 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Col16a1Q8BLX7 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Col16a1Q8BLX7 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col16a1Q8BLX7 Gm28918-201ENSMUST00000188822 699 ntBASIC9.14□□□□□ -0.95
Col16a1Q8BLX7 Gm29201-201ENSMUST00000189120 431 ntBASIC9.14□□□□□ -0.95
Col16a1Q8BLX7 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Col16a1Q8BLX7 Gm37349-201ENSMUST00000194205 624 ntBASIC9.14□□□□□ -0.95
Col16a1Q8BLX7 Ighv1-27-201ENSMUST00000194473 340 ntBASIC9.14□□□□□ -0.95
Col16a1Q8BLX7 Gm43725-201ENSMUST00000200122 369 ntBASIC9.14□□□□□ -0.95
Col16a1Q8BLX7 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC9.14□□□□□ -0.95
Col16a1Q8BLX7 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC9.14□□□□□ -0.95
Col16a1Q8BLX7 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Col16a1Q8BLX7 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC9.14□□□□□ -0.95
Col16a1Q8BLX7 AC113031.1-201ENSMUST00000227400 432 ntBASIC9.14□□□□□ -0.95
Col16a1Q8BLX7 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col16a1Q8BLX7 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC9.14□□□□□ -0.95
Col16a1Q8BLX7 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Col16a1Q8BLX7 Gm44121-201ENSMUST00000205169 2006 ntBASIC9.14□□□□□ -0.95
Col16a1Q8BLX7 Erc2-201ENSMUST00000090302 6083 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Col16a1Q8BLX7 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Col16a1Q8BLX7 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Col16a1Q8BLX7 Cldn2-201ENSMUST00000054889 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col16a1Q8BLX7 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC9.14□□□□□ -0.95
Col16a1Q8BLX7 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col16a1Q8BLX7 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col16a1Q8BLX7 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Col16a1Q8BLX7 Gm11853-201ENSMUST00000119687 1384 ntBASIC9.14□□□□□ -0.95
Col16a1Q8BLX7 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Col16a1Q8BLX7 Gm9839-201ENSMUST00000195252 1437 ntBASIC9.13□□□□□ -0.95
Col16a1Q8BLX7 Alpk1-201ENSMUST00000029662 4795 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Col16a1Q8BLX7 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Col16a1Q8BLX7 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms