Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm37924-201ENSMUST00000195470 3647 ntBASIC8.18□□□□□ -1.1
Nup98Q6PFD9 Gm12653-201ENSMUST00000117778 561 ntBASIC8.17□□□□□ -1.1
Nup98Q6PFD9 Gm15621-201ENSMUST00000119162 364 ntBASIC8.17□□□□□ -1.1
Nup98Q6PFD9 Gm25117-201ENSMUST00000157194 144 ntBASIC8.17□□□□□ -1.1
Nup98Q6PFD9 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC8.17□□□□□ -1.1
Nup98Q6PFD9 Gm37191-201ENSMUST00000193346 388 ntBASIC8.17□□□□□ -1.1
Nup98Q6PFD9 Gm19185-201ENSMUST00000196365 643 ntBASIC8.17□□□□□ -1.1
Nup98Q6PFD9 Gm7554-201ENSMUST00000202282 574 ntBASIC8.17□□□□□ -1.1
Nup98Q6PFD9 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Nup98Q6PFD9 AC154642.1-201ENSMUST00000224173 740 ntBASIC8.17□□□□□ -1.1
Nup98Q6PFD9 AC154834.1-201ENSMUST00000224697 358 ntBASIC8.17□□□□□ -1.1
Nup98Q6PFD9 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC8.17□□□□□ -1.1
Nup98Q6PFD9 n-R5s97-201ENSMUST00000082585 113 ntBASIC8.17□□□□□ -1.1
Nup98Q6PFD9 Gm42679-201ENSMUST00000197086 2906 ntBASIC8.17□□□□□ -1.1
Nup98Q6PFD9 Gm44677-201ENSMUST00000209151 3739 ntBASIC8.17□□□□□ -1.1
Nup98Q6PFD9 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC8.17□□□□□ -1.1
Nup98Q6PFD9 AC156802.2-201ENSMUST00000225239 5740 ntBASIC8.17□□□□□ -1.1
Nup98Q6PFD9 Zscan18-203ENSMUST00000210650 3668 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Nup98Q6PFD9 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Nup98Q6PFD9 Ash1l-202ENSMUST00000186583 11644 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Nup98Q6PFD9 Epb41l2-202ENSMUST00000092645 4280 ntAPPRIS P2 TSL 5 BASIC8.17□□□□□ -1.1
Nup98Q6PFD9 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Nup98Q6PFD9 Pkd1l3-201ENSMUST00000057344 6456 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
Nup98Q6PFD9 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Nup98Q6PFD9 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Nup98Q6PFD9 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Nup98Q6PFD9 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC8.17□□□□□ -1.1
Nup98Q6PFD9 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Nup98Q6PFD9 Mtif2-201ENSMUST00000020749 2425 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Nup98Q6PFD9 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC8.17□□□□□ -1.1
Nup98Q6PFD9 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Nup98Q6PFD9 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Nup98Q6PFD9 Efl1-205ENSMUST00000179489 3608 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Nup98Q6PFD9 Prpf8-202ENSMUST00000102510 7249 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Nup98Q6PFD9 Gm23748-201ENSMUST00000104227 131 ntBASIC8.17□□□□□ -1.1
Nup98Q6PFD9 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Nup98Q6PFD9 Gm16016-201ENSMUST00000120831 550 ntBASIC8.17□□□□□ -1.1
Nup98Q6PFD9 Gm15750-201ENSMUST00000120970 616 ntBASIC8.17□□□□□ -1.1
Nup98Q6PFD9 Gm13642-201ENSMUST00000121697 381 ntBASIC8.17□□□□□ -1.1
Nup98Q6PFD9 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Nup98Q6PFD9 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Nup98Q6PFD9 Gm20615-201ENSMUST00000177503 705 ntBASIC8.17□□□□□ -1.1
Nup98Q6PFD9 Mir6348-201ENSMUST00000183804 120 ntBASIC8.17□□□□□ -1.1
Nup98Q6PFD9 Mir6989-201ENSMUST00000184812 65 ntBASIC8.17□□□□□ -1.1
Nup98Q6PFD9 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC8.17□□□□□ -1.1
Nup98Q6PFD9 Gm6074-201ENSMUST00000193340 451 ntBASIC8.17□□□□□ -1.1
Nup98Q6PFD9 Gm18914-201ENSMUST00000214625 616 ntBASIC8.17□□□□□ -1.1
Nup98Q6PFD9 Gm17849-201ENSMUST00000219788 853 ntBASIC8.17□□□□□ -1.1
Nup98Q6PFD9 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC8.17□□□□□ -1.1
Nup98Q6PFD9 AC132260.1-201ENSMUST00000225499 734 ntBASIC8.17□□□□□ -1.1
Nup98Q6PFD9 AC156016.2-201ENSMUST00000228200 525 ntBASIC8.17□□□□□ -1.1
Nup98Q6PFD9 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Nup98Q6PFD9 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Nup98Q6PFD9 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Nup98Q6PFD9 Edar-201ENSMUST00000003312 3637 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Nup98Q6PFD9 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC8.16□□□□□ -1.1
Nup98Q6PFD9 Gpr182-201ENSMUST00000079692 3954 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Nup98Q6PFD9 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Nup98Q6PFD9 Unc45b-202ENSMUST00000108160 4152 ntAPPRIS ALT1 TSL 5 BASIC8.16□□□□□ -1.1
Nup98Q6PFD9 Gm6786-201ENSMUST00000203165 1915 ntBASIC8.16□□□□□ -1.1
Nup98Q6PFD9 AC134577.3-201ENSMUST00000226490 3000 ntBASIC8.16□□□□□ -1.1
Nup98Q6PFD9 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Nup98Q6PFD9 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Nup98Q6PFD9 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Nup98Q6PFD9 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Nup98Q6PFD9 Tubgcp5-201ENSMUST00000032627 3905 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Nup98Q6PFD9 Olfr224-204ENSMUST00000217009 2098 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Nup98Q6PFD9 Ptk2b-208ENSMUST00000178730 3863 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Nup98Q6PFD9 Trpm8-201ENSMUST00000040210 4146 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Nup98Q6PFD9 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC8.16□□□□□ -1.1
Nup98Q6PFD9 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC8.16□□□□□ -1.1
Nup98Q6PFD9 Gm14745-201ENSMUST00000118480 1096 ntBASIC8.16□□□□□ -1.1
Nup98Q6PFD9 Gm15181-201ENSMUST00000120142 177 ntBASIC8.16□□□□□ -1.1
Nup98Q6PFD9 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Nup98Q6PFD9 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC8.16□□□□□ -1.1
Nup98Q6PFD9 Gm42443-201ENSMUST00000198084 1155 ntBASIC8.16□□□□□ -1.1
Nup98Q6PFD9 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC8.16□□□□□ -1.1
Nup98Q6PFD9 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC8.16□□□□□ -1.1
Nup98Q6PFD9 Gm7769-201ENSMUST00000212900 933 ntBASIC8.16□□□□□ -1.1
Nup98Q6PFD9 Gm9231-201ENSMUST00000220817 1009 ntBASIC8.16□□□□□ -1.1
Nup98Q6PFD9 AC154573.2-201ENSMUST00000224174 378 ntBASIC8.16□□□□□ -1.1
Nup98Q6PFD9 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Nup98Q6PFD9 Gm21731-201ENSMUST00000079524 489 ntBASIC8.16□□□□□ -1.1
Nup98Q6PFD9 4931406P16Rik-201ENSMUST00000085592 5798 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Nup98Q6PFD9 Gm29226-201ENSMUST00000186871 2167 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Nup98Q6PFD9 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Nup98Q6PFD9 Fktn-201ENSMUST00000061771 3370 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Nup98Q6PFD9 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Nup98Q6PFD9 Fmn1-203ENSMUST00000102547 4967 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
Nup98Q6PFD9 Stard13-202ENSMUST00000110483 5662 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
Nup98Q6PFD9 Sptbn1-202ENSMUST00000011877 8238 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Nup98Q6PFD9 Gtf3c2-210ENSMUST00000202639 4200 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Nup98Q6PFD9 Pcdh11x-201ENSMUST00000050239 4442 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Nup98Q6PFD9 Ankef1-210ENSMUST00000180246 2726 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Nup98Q6PFD9 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC8.16□□□□□ -1.1
Nup98Q6PFD9 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC8.15□□□□□ -1.1
Nup98Q6PFD9 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC8.15□□□□□ -1.1
Nup98Q6PFD9 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Nup98Q6PFD9 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
Nup98Q6PFD9 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms