Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Slco2b1-202ENSMUST00000107086 3993 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
Nkx3-1P97436 Kcnb2-202ENSMUST00000175681 3963 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Nkx3-1P97436 Grik1-210ENSMUST00000228034 2708 ntBASIC6.18□□□□□ -1.42
Nkx3-1P97436 Gm37552-201ENSMUST00000193939 2520 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Nkx3-1P97436 Nasp-201ENSMUST00000030456 2520 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Nkx3-1P97436 Rtel1-205ENSMUST00000108815 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Nkx3-1P97436 Slc37a3-201ENSMUST00000090243 4030 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Nkx3-1P97436 Gm22774-201ENSMUST00000102084 109 ntBASIC6.18□□□□□ -1.42
Nkx3-1P97436 Gm12939-201ENSMUST00000117303 165 ntBASIC6.18□□□□□ -1.42
Nkx3-1P97436 Gm13732-201ENSMUST00000117753 535 ntBASIC6.18□□□□□ -1.42
Nkx3-1P97436 Gm12653-201ENSMUST00000117778 561 ntBASIC6.18□□□□□ -1.42
Nkx3-1P97436 Gm8089-201ENSMUST00000122463 968 ntBASIC6.18□□□□□ -1.42
Nkx3-1P97436 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC6.18□□□□□ -1.42
Nkx3-1P97436 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Nkx3-1P97436 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Nkx3-1P97436 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Nkx3-1P97436 Gm6931-201ENSMUST00000183103 371 ntBASIC6.18□□□□□ -1.42
Nkx3-1P97436 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Nkx3-1P97436 Gm43063-201ENSMUST00000198198 1081 ntBASIC6.18□□□□□ -1.42
Nkx3-1P97436 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC6.18□□□□□ -1.42
Nkx3-1P97436 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Nkx3-1P97436 Gm45391-201ENSMUST00000211563 576 ntTSL 5 BASIC6.18□□□□□ -1.42
Nkx3-1P97436 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC6.18□□□□□ -1.42
Nkx3-1P97436 AC153567.1-201ENSMUST00000218424 1263 ntTSL 5 BASIC6.18□□□□□ -1.42
Nkx3-1P97436 CT009556.4-201ENSMUST00000227092 200 ntBASIC6.18□□□□□ -1.42
Nkx3-1P97436 Olfr644-201ENSMUST00000077417 1071 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Nkx3-1P97436 Tcl1b2-201ENSMUST00000081379 1009 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Nkx3-1P97436 Slxl1-201ENSMUST00000088740 730 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Nkx3-1P97436 Cbx3-ps4-201ENSMUST00000091531 549 ntBASIC6.18□□□□□ -1.42
Nkx3-1P97436 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Nkx3-1P97436 Gm18194-202ENSMUST00000210952 3442 ntBASIC6.18□□□□□ -1.42
Nkx3-1P97436 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Nkx3-1P97436 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Nkx3-1P97436 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Nkx3-1P97436 Zrsr1-201ENSMUST00000049506 3282 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Nkx3-1P97436 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Nkx3-1P97436 Txlnb-201ENSMUST00000037964 4422 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Nkx3-1P97436 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Nkx3-1P97436 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Nkx3-1P97436 Adarb2-202ENSMUST00000123187 4002 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Nkx3-1P97436 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Nkx3-1P97436 Far1-201ENSMUST00000033018 4962 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Nkx3-1P97436 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC6.17□□□□□ -1.42
Nkx3-1P97436 Coa7-202ENSMUST00000131656 3714 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Nkx3-1P97436 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC6.17□□□□□ -1.42
Nkx3-1P97436 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC6.17□□□□□ -1.42
Nkx3-1P97436 Gm45807-201ENSMUST00000209142 2874 ntBASIC6.17□□□□□ -1.42
Nkx3-1P97436 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
Nkx3-1P97436 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Nkx3-1P97436 Zfp143-204ENSMUST00000209505 2693 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Nkx3-1P97436 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC6.17□□□□□ -1.42
Nkx3-1P97436 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Nkx3-1P97436 Drp2-203ENSMUST00000113226 3499 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Nkx3-1P97436 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Nkx3-1P97436 Gm6493-201ENSMUST00000159889 1786 ntBASIC6.17□□□□□ -1.42
Nkx3-1P97436 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Nkx3-1P97436 Gm22438-201ENSMUST00000104049 132 ntBASIC6.17□□□□□ -1.42
Nkx3-1P97436 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
Nkx3-1P97436 Gm13754-201ENSMUST00000120486 998 ntBASIC6.17□□□□□ -1.42
Nkx3-1P97436 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC6.17□□□□□ -1.42
Nkx3-1P97436 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC6.17□□□□□ -1.42
Nkx3-1P97436 Acss2os-201ENSMUST00000148685 629 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Nkx3-1P97436 Gm10364-202ENSMUST00000153034 1001 ntBASIC6.17□□□□□ -1.42
Nkx3-1P97436 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Nkx3-1P97436 Gm16298-201ENSMUST00000161107 420 ntBASIC6.17□□□□□ -1.42
Nkx3-1P97436 Gm16027-201ENSMUST00000161618 758 ntBASIC6.17□□□□□ -1.42
Nkx3-1P97436 Gm8245-201ENSMUST00000182434 987 ntBASIC6.17□□□□□ -1.42
Nkx3-1P97436 Gm37620-201ENSMUST00000192910 501 ntBASIC6.17□□□□□ -1.42
Nkx3-1P97436 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Nkx3-1P97436 Gm4870-201ENSMUST00000198525 1251 ntBASIC6.17□□□□□ -1.42
Nkx3-1P97436 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Nkx3-1P97436 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC6.17□□□□□ -1.42
Nkx3-1P97436 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC6.17□□□□□ -1.42
Nkx3-1P97436 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC6.17□□□□□ -1.42
Nkx3-1P97436 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC6.17□□□□□ -1.42
Nkx3-1P97436 Gm19047-201ENSMUST00000220922 1099 ntBASIC6.17□□□□□ -1.42
Nkx3-1P97436 AC127242.3-201ENSMUST00000222009 580 ntBASIC6.17□□□□□ -1.42
Nkx3-1P97436 AC165157.1-201ENSMUST00000222981 580 ntBASIC6.17□□□□□ -1.42
Nkx3-1P97436 AC151730.1-201ENSMUST00000226106 448 ntBASIC6.17□□□□□ -1.42
Nkx3-1P97436 AC174678.3-201ENSMUST00000227568 362 ntBASIC6.17□□□□□ -1.42
Nkx3-1P97436 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Nkx3-1P97436 Gm24451-201ENSMUST00000083353 133 ntBASIC6.17□□□□□ -1.42
Nkx3-1P97436 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Nkx3-1P97436 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC6.17□□□□□ -1.42
Nkx3-1P97436 Camk2d-205ENSMUST00000106401 3059 ntTSL 5 BASIC6.17□□□□□ -1.42
Nkx3-1P97436 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Nkx3-1P97436 Gm45358-201ENSMUST00000209492 2305 ntBASIC6.17□□□□□ -1.42
Nkx3-1P97436 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Nkx3-1P97436 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Nkx3-1P97436 Gm37080-201ENSMUST00000194804 2404 ntBASIC6.17□□□□□ -1.42
Nkx3-1P97436 Epc1-203ENSMUST00000115870 3817 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Nkx3-1P97436 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC6.17□□□□□ -1.42
Nkx3-1P97436 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Nkx3-1P97436 Oas2-201ENSMUST00000053909 3869 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
Nkx3-1P97436 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC6.17□□□□□ -1.42
Nkx3-1P97436 Gm37274-201ENSMUST00000192167 1682 ntBASIC6.17□□□□□ -1.42
Nkx3-1P97436 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Nkx3-1P97436 Fchsd2-201ENSMUST00000032931 4453 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Nkx3-1P97436 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Nkx3-1P97436 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 95.8 ms