Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC8.17□□□□□ -1.1
Hmgb1P63158 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Hmgb1P63158 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Hmgb1P63158 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Hmgb1P63158 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Hmgb1P63158 Gatad2b-203ENSMUST00000197988 1815 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Hmgb1P63158 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC8.17□□□□□ -1.1
Hmgb1P63158 AC159195.2-201ENSMUST00000223670 3757 ntBASIC8.17□□□□□ -1.1
Hmgb1P63158 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Hmgb1P63158 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Hmgb1P63158 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Hmgb1P63158 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Hmgb1P63158 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC8.16□□□□□ -1.1
Hmgb1P63158 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
Hmgb1P63158 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC8.16□□□□□ -1.1
Hmgb1P63158 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Hmgb1P63158 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Hmgb1P63158 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Hmgb1P63158 Gm3055-201ENSMUST00000105316 720 ntTSL 5 BASIC8.16□□□□□ -1.1
Hmgb1P63158 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Hmgb1P63158 Gm13712-201ENSMUST00000117484 2295 ntBASIC8.16□□□□□ -1.1
Hmgb1P63158 Gm11945-201ENSMUST00000120551 476 ntBASIC8.16□□□□□ -1.1
Hmgb1P63158 Gm14300-201ENSMUST00000120800 946 ntBASIC8.16□□□□□ -1.1
Hmgb1P63158 Defa33-201ENSMUST00000120874 426 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Hmgb1P63158 Gm11188-201ENSMUST00000122382 388 ntBASIC8.16□□□□□ -1.1
Hmgb1P63158 Gm1947-201ENSMUST00000122451 910 ntBASIC8.16□□□□□ -1.1
Hmgb1P63158 Ermap-206ENSMUST00000138395 4551 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Hmgb1P63158 Gm23467-201ENSMUST00000157127 159 ntBASIC8.16□□□□□ -1.1
Hmgb1P63158 Ankrd55-204ENSMUST00000168684 1005 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Hmgb1P63158 Defa2-201ENSMUST00000170275 426 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Hmgb1P63158 Apol11a-201ENSMUST00000172191 1132 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Hmgb1P63158 Olfr762-ps1-201ENSMUST00000172948 927 ntBASIC8.16□□□□□ -1.1
Hmgb1P63158 Gm3611-201ENSMUST00000173687 877 ntBASIC8.16□□□□□ -1.1
Hmgb1P63158 Mir3471-2-201ENSMUST00000174896 102 ntBASIC8.16□□□□□ -1.1
Hmgb1P63158 Gm25692-201ENSMUST00000175444 125 ntBASIC8.16□□□□□ -1.1
Hmgb1P63158 Gm26545-201ENSMUST00000181082 1746 ntTSL 5 BASIC8.16□□□□□ -1.1
Hmgb1P63158 Gm26720-201ENSMUST00000181260 3538 ntTSL 5 BASIC8.16□□□□□ -1.1
Hmgb1P63158 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Hmgb1P63158 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Hmgb1P63158 Gm27542-201ENSMUST00000184184 256 ntBASIC8.16□□□□□ -1.1
Hmgb1P63158 Gm9745-202ENSMUST00000187196 858 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Hmgb1P63158 Gm38368-201ENSMUST00000193181 1335 ntBASIC8.16□□□□□ -1.1
Hmgb1P63158 Gm16754-202ENSMUST00000193429 508 ntTSL 3 BASIC8.16□□□□□ -1.1
Hmgb1P63158 Cacnb2-216ENSMUST00000195841 503 ntTSL 3 BASIC8.16□□□□□ -1.1
Hmgb1P63158 Gm31881-202ENSMUST00000199455 559 ntTSL 3 BASIC8.16□□□□□ -1.1
Hmgb1P63158 Gm42640-201ENSMUST00000199792 1195 ntBASIC8.16□□□□□ -1.1
Hmgb1P63158 Gm19228-201ENSMUST00000214030 717 ntBASIC8.16□□□□□ -1.1
Hmgb1P63158 AC160966.1-203ENSMUST00000214689 1186 ntTSL 5 BASIC8.16□□□□□ -1.1
Hmgb1P63158 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC8.16□□□□□ -1.1
Hmgb1P63158 AC151904.2-201ENSMUST00000218683 1177 ntBASIC8.16□□□□□ -1.1
Hmgb1P63158 AC132384.6-201ENSMUST00000218976 1206 ntBASIC8.16□□□□□ -1.1
Hmgb1P63158 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC8.16□□□□□ -1.1
Hmgb1P63158 AC163041.2-201ENSMUST00000223082 573 ntBASIC8.16□□□□□ -1.1
Hmgb1P63158 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Hmgb1P63158 Apoa2-201ENSMUST00000005824 492 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Hmgb1P63158 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Hmgb1P63158 1700001C19Rik-202ENSMUST00000073143 614 ntAPPRIS ALT2 TSL 2 BASIC8.16□□□□□ -1.1
Hmgb1P63158 Zfp781-201ENSMUST00000076281 732 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Hmgb1P63158 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Hmgb1P63158 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC8.16□□□□□ -1.1
Hmgb1P63158 Mir135b-201ENSMUST00000083501 97 ntBASIC8.16□□□□□ -1.1
Hmgb1P63158 Gm25007-201ENSMUST00000083808 133 ntBASIC8.16□□□□□ -1.1
Hmgb1P63158 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Hmgb1P63158 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Hmgb1P63158 Gm37790-201ENSMUST00000193136 3346 ntBASIC8.16□□□□□ -1.1
Hmgb1P63158 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Hmgb1P63158 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
Hmgb1P63158 Gm7562-201ENSMUST00000210502 2537 ntBASIC8.15□□□□□ -1.1
Hmgb1P63158 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Hmgb1P63158 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Hmgb1P63158 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC8.15□□□□□ -1.1
Hmgb1P63158 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC8.15□□□□□ -1.1
Hmgb1P63158 AC164437.5-201ENSMUST00000227235 4414 ntBASIC8.15□□□□□ -1.1
Hmgb1P63158 Trmt10b-201ENSMUST00000044673 2064 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Hmgb1P63158 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Hmgb1P63158 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Hmgb1P63158 Gm5087-201ENSMUST00000060526 1921 ntTSL 2 BASIC8.15□□□□□ -1.1
Hmgb1P63158 Gm45250-201ENSMUST00000209414 3592 ntBASIC8.15□□□□□ -1.1
Hmgb1P63158 Gm21152-201ENSMUST00000190271 3483 ntBASIC8.15□□□□□ -1.1
Hmgb1P63158 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Hmgb1P63158 AI662270-202ENSMUST00000143673 1428 ntTSL 5 BASIC8.15□□□□□ -1.1
Hmgb1P63158 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC8.15□□□□□ -1.1
Hmgb1P63158 Gm28651-202ENSMUST00000227968 2693 ntBASIC8.15□□□□□ -1.1
Hmgb1P63158 Gm28055-202ENSMUST00000189576 1301 ntTSL 3 BASIC8.15□□□□□ -1.1
Hmgb1P63158 Olfr53-201ENSMUST00000084456 1328 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
Hmgb1P63158 Gmfg-202ENSMUST00000108289 477 ntTSL 3 BASIC8.15□□□□□ -1.1
Hmgb1P63158 Gm5752-201ENSMUST00000117771 594 ntBASIC8.15□□□□□ -1.1
Hmgb1P63158 Gm13858-201ENSMUST00000118862 671 ntBASIC8.15□□□□□ -1.1
Hmgb1P63158 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC8.15□□□□□ -1.1
Hmgb1P63158 Gm11739-201ENSMUST00000125269 723 ntTSL 3 BASIC8.15□□□□□ -1.1
Hmgb1P63158 Gm15606-202ENSMUST00000139851 711 ntTSL 3 BASIC8.15□□□□□ -1.1
Hmgb1P63158 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC8.15□□□□□ -1.1
Hmgb1P63158 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Hmgb1P63158 4933427D06Rik-202ENSMUST00000153517 522 ntTSL 5 BASIC8.15□□□□□ -1.1
Hmgb1P63158 Gm23220-201ENSMUST00000158115 137 ntBASIC8.15□□□□□ -1.1
Hmgb1P63158 Gm23117-201ENSMUST00000158482 108 ntBASIC8.15□□□□□ -1.1
Hmgb1P63158 Gm5611-201ENSMUST00000164523 852 ntBASIC8.15□□□□□ -1.1
Hmgb1P63158 Rpain-211ENSMUST00000169965 343 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Hmgb1P63158 Gm23639-201ENSMUST00000175078 132 ntBASIC8.15□□□□□ -1.1
Hmgb1P63158 Gm20627-202ENSMUST00000176275 564 ntTSL 5 BASIC8.15□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 112 ms