Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gdpgp1-201ENSMUST00000062915 4189 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Sox1P53783 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC7.9□□□□□ -1.14
Sox1P53783 Ano7-202ENSMUST00000186641 3984 ntAPPRIS P3 TSL 5 BASIC7.9□□□□□ -1.14
Sox1P53783 Ano4-208ENSMUST00000182613 3880 ntAPPRIS ALT1 TSL 5 BASIC7.9□□□□□ -1.14
Sox1P53783 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Sox1P53783 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Sox1P53783 Olfr1062-201ENSMUST00000105213 956 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Sox1P53783 Gm11445-201ENSMUST00000119101 532 ntBASIC7.9□□□□□ -1.14
Sox1P53783 Gm13486-201ENSMUST00000119910 282 ntBASIC7.9□□□□□ -1.14
Sox1P53783 Gm9208-201ENSMUST00000120468 948 ntBASIC7.9□□□□□ -1.14
Sox1P53783 Gm12455-201ENSMUST00000121242 416 ntBASIC7.9□□□□□ -1.14
Sox1P53783 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC7.9□□□□□ -1.14
Sox1P53783 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Sox1P53783 Gm16143-201ENSMUST00000155982 538 ntTSL 5 BASIC7.9□□□□□ -1.14
Sox1P53783 Gm24685-201ENSMUST00000157764 285 ntBASIC7.9□□□□□ -1.14
Sox1P53783 Gm26371-201ENSMUST00000157829 104 ntBASIC7.9□□□□□ -1.14
Sox1P53783 Gm25433-201ENSMUST00000158283 286 ntBASIC7.9□□□□□ -1.14
Sox1P53783 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC7.9□□□□□ -1.14
Sox1P53783 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Sox1P53783 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC7.9□□□□□ -1.14
Sox1P53783 Gm8241-201ENSMUST00000189286 816 ntBASIC7.9□□□□□ -1.14
Sox1P53783 Gm29145-201ENSMUST00000189914 456 ntBASIC7.9□□□□□ -1.14
Sox1P53783 Gm8407-201ENSMUST00000192719 427 ntBASIC7.9□□□□□ -1.14
Sox1P53783 Gm3544-201ENSMUST00000196129 305 ntBASIC7.9□□□□□ -1.14
Sox1P53783 Gm43582-201ENSMUST00000196149 343 ntBASIC7.9□□□□□ -1.14
Sox1P53783 Gm4751-201ENSMUST00000200620 1105 ntBASIC7.9□□□□□ -1.14
Sox1P53783 AC153561.1-201ENSMUST00000215943 469 ntBASIC7.9□□□□□ -1.14
Sox1P53783 AL772397.1-201ENSMUST00000216707 606 ntBASIC7.9□□□□□ -1.14
Sox1P53783 Gm7413-201ENSMUST00000219498 462 ntBASIC7.9□□□□□ -1.14
Sox1P53783 AC116465.1-201ENSMUST00000220324 235 ntBASIC7.9□□□□□ -1.14
Sox1P53783 AC121137.1-201ENSMUST00000225272 602 ntBASIC7.9□□□□□ -1.14
Sox1P53783 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC7.9□□□□□ -1.14
Sox1P53783 Gm6369-201ENSMUST00000069626 412 ntBASIC7.9□□□□□ -1.14
Sox1P53783 Chn1-201ENSMUST00000070579 1023 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Sox1P53783 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Sox1P53783 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Sox1P53783 Gm5528-201ENSMUST00000076314 480 ntBASIC7.9□□□□□ -1.14
Sox1P53783 Gm22362-201ENSMUST00000083102 134 ntBASIC7.9□□□□□ -1.14
Sox1P53783 Gm22864-201ENSMUST00000083950 130 ntBASIC7.9□□□□□ -1.14
Sox1P53783 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC7.9□□□□□ -1.14
Sox1P53783 Olfr635-201ENSMUST00000098185 966 ntAPPRIS P2 BASIC7.9□□□□□ -1.14
Sox1P53783 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Sox1P53783 Slc7a2-202ENSMUST00000098816 3677 ntAPPRIS ALT1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Sox1P53783 Rdh16-201ENSMUST00000071646 3207 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Sox1P53783 Tnfrsf10b-201ENSMUST00000022663 3179 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Sox1P53783 Drp2-204ENSMUST00000113228 3141 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
Sox1P53783 Pum1-205ENSMUST00000105992 5058 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Sox1P53783 AC122828.2-201ENSMUST00000222511 2880 ntBASIC7.9□□□□□ -1.15
Sox1P53783 Cdc6-202ENSMUST00000093937 2559 ntAPPRIS P4 TSL 1 (best) BASIC7.9□□□□□ -1.15
Sox1P53783 Tbc1d24-216ENSMUST00000202925 4216 ntTSL 5 BASIC7.9□□□□□ -1.15
Sox1P53783 Pofut1-206ENSMUST00000123487 4143 ntTSL 2 BASIC7.9□□□□□ -1.15
Sox1P53783 Gucy2c-202ENSMUST00000078095 3863 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.15
Sox1P53783 Gm44228-201ENSMUST00000204888 2026 ntBASIC7.9□□□□□ -1.15
Sox1P53783 Me1-202ENSMUST00000185374 3292 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
Sox1P53783 Gm15533-202ENSMUST00000206216 3262 ntBASIC7.9□□□□□ -1.15
Sox1P53783 Utrn-204ENSMUST00000217994 3161 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Sox1P53783 Ttll1-203ENSMUST00000109480 1876 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Sox1P53783 AC117656.3-203ENSMUST00000225007 1809 ntBASIC7.89□□□□□ -1.15
Sox1P53783 Map3k20-204ENSMUST00000135469 6663 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Sox1P53783 Sfmbt1-204ENSMUST00000227303 2960 ntBASIC7.89□□□□□ -1.15
Sox1P53783 Oprl1-201ENSMUST00000071585 2999 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
Sox1P53783 Gm28989-201ENSMUST00000187867 1613 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Sox1P53783 Gm37314-201ENSMUST00000193545 2685 ntBASIC7.89□□□□□ -1.15
Sox1P53783 Lrrc18-201ENSMUST00000038956 2587 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
Sox1P53783 Trpm6-201ENSMUST00000040489 6508 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Sox1P53783 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Sox1P53783 Txk-202ENSMUST00000169534 2344 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
Sox1P53783 Kcnj15-201ENSMUST00000037154 5089 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Sox1P53783 Slc24a2-202ENSMUST00000107155 2171 ntTSL 5 BASIC7.89□□□□□ -1.15
Sox1P53783 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Sox1P53783 Gm14692-201ENSMUST00000114672 782 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Sox1P53783 Gm1140-201ENSMUST00000114675 782 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Sox1P53783 Gm14509-201ENSMUST00000117312 1286 ntBASIC7.89□□□□□ -1.15
Sox1P53783 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Sox1P53783 Gm11212-201ENSMUST00000118337 618 ntBASIC7.89□□□□□ -1.15
Sox1P53783 Gm8662-201ENSMUST00000118644 574 ntBASIC7.89□□□□□ -1.15
Sox1P53783 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Sox1P53783 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Sox1P53783 Gm18415-201ENSMUST00000177464 647 ntBASIC7.89□□□□□ -1.15
Sox1P53783 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC7.89□□□□□ -1.15
Sox1P53783 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Sox1P53783 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Sox1P53783 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Sox1P53783 Mir7084-201ENSMUST00000183876 70 ntBASIC7.89□□□□□ -1.15
Sox1P53783 Gm27804-201ENSMUST00000185135 119 ntBASIC7.89□□□□□ -1.15
Sox1P53783 Gm29184-201ENSMUST00000190038 334 ntBASIC7.89□□□□□ -1.15
Sox1P53783 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC7.89□□□□□ -1.15
Sox1P53783 Gm7019-201ENSMUST00000194122 369 ntBASIC7.89□□□□□ -1.15
Sox1P53783 Gm6366-201ENSMUST00000198766 826 ntBASIC7.89□□□□□ -1.15
Sox1P53783 Gm20072-201ENSMUST00000202231 292 ntBASIC7.89□□□□□ -1.15
Sox1P53783 Gm44221-201ENSMUST00000203552 388 ntBASIC7.89□□□□□ -1.15
Sox1P53783 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC7.89□□□□□ -1.15
Sox1P53783 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC7.89□□□□□ -1.15
Sox1P53783 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC7.89□□□□□ -1.15
Sox1P53783 Gm46103-201ENSMUST00000217614 341 ntBASIC7.89□□□□□ -1.15
Sox1P53783 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC7.89□□□□□ -1.15
Sox1P53783 Gm2754-201ENSMUST00000223383 589 ntBASIC7.89□□□□□ -1.15
Sox1P53783 AC154642.1-201ENSMUST00000224173 740 ntBASIC7.89□□□□□ -1.15
Sox1P53783 CT030194.2-201ENSMUST00000225752 379 ntBASIC7.89□□□□□ -1.15
Sox1P53783 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms