Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Olfr1346-202ENSMUST00000207658 4429 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Cux1P53564 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cux1P53564 Efr3a-213ENSMUST00000211878 2541 ntTSL 5 BASIC10.73□□□□□ -0.69
Cux1P53564 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cux1P53564 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cux1P53564 Gria1-204ENSMUST00000151045 5361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cux1P53564 Olfr77-201ENSMUST00000057596 9649 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cux1P53564 AC155710.1-201ENSMUST00000219913 1353 ntBASIC10.73□□□□□ -0.69
Cux1P53564 Vmn1r44-213ENSMUST00000228700 2004 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Cux1P53564 Ifit3b-201ENSMUST00000076249 2000 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cux1P53564 Aspa-206ENSMUST00000184572 1746 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Cux1P53564 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cux1P53564 n-R5s16-201ENSMUST00000104555 119 ntBASIC10.73□□□□□ -0.69
Cux1P53564 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Cux1P53564 Gm14018-201ENSMUST00000119042 455 ntBASIC10.73□□□□□ -0.69
Cux1P53564 Gm22518-201ENSMUST00000158267 68 ntBASIC10.73□□□□□ -0.69
Cux1P53564 Gm25717-201ENSMUST00000158631 353 ntBASIC10.73□□□□□ -0.69
Cux1P53564 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Cux1P53564 Ms4a2-202ENSMUST00000164792 1010 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cux1P53564 Gm28527-201ENSMUST00000185210 297 ntBASIC10.73□□□□□ -0.69
Cux1P53564 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cux1P53564 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cux1P53564 Gm37809-201ENSMUST00000195050 931 ntBASIC10.73□□□□□ -0.69
Cux1P53564 Gm7270-201ENSMUST00000195818 1128 ntBASIC10.73□□□□□ -0.69
Cux1P53564 Gm42443-201ENSMUST00000198084 1155 ntBASIC10.73□□□□□ -0.69
Cux1P53564 Gm7554-201ENSMUST00000202282 574 ntBASIC10.73□□□□□ -0.69
Cux1P53564 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC10.73□□□□□ -0.69
Cux1P53564 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC10.73□□□□□ -0.69
Cux1P53564 Gm5055-201ENSMUST00000215697 581 ntBASIC10.73□□□□□ -0.69
Cux1P53564 AC104906.1-201ENSMUST00000218122 913 ntBASIC10.73□□□□□ -0.69
Cux1P53564 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC10.73□□□□□ -0.69
Cux1P53564 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Cux1P53564 Ano4-210ENSMUST00000182790 4018 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
Cux1P53564 Arfgef1-203ENSMUST00000131556 3424 ntTSL 5 BASIC10.73□□□□□ -0.69
Cux1P53564 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cux1P53564 Plekha6-202ENSMUST00000105082 7085 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cux1P53564 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC10.72□□□□□ -0.69
Cux1P53564 Ripor2-204ENSMUST00000110383 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cux1P53564 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC10.72□□□□□ -0.69
Cux1P53564 Rps6ka6-201ENSMUST00000065976 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cux1P53564 AC122828.2-201ENSMUST00000222511 2880 ntBASIC10.72□□□□□ -0.69
Cux1P53564 Tsc1-202ENSMUST00000113867 7682 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cux1P53564 Tsc1-201ENSMUST00000028155 7674 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cux1P53564 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Cux1P53564 Gm38244-201ENSMUST00000191737 2586 ntBASIC10.72□□□□□ -0.69
Cux1P53564 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cux1P53564 Gm11853-201ENSMUST00000119687 1384 ntBASIC10.72□□□□□ -0.69
Cux1P53564 Rbbp6-201ENSMUST00000052135 6184 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
Cux1P53564 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC10.72□□□□□ -0.69
Cux1P53564 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC10.72□□□□□ -0.69
Cux1P53564 Gm9839-201ENSMUST00000195252 1437 ntBASIC10.72□□□□□ -0.69
Cux1P53564 Gm43534-201ENSMUST00000197685 2853 ntBASIC10.72□□□□□ -0.69
Cux1P53564 Gm37633-201ENSMUST00000192858 2700 ntBASIC10.72□□□□□ -0.69
Cux1P53564 Gm11821-201ENSMUST00000117335 979 ntBASIC10.72□□□□□ -0.69
Cux1P53564 Sms-ps-201ENSMUST00000121773 1101 ntBASIC10.72□□□□□ -0.69
Cux1P53564 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC10.72□□□□□ -0.69
Cux1P53564 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Cux1P53564 Gm27601-201ENSMUST00000184794 127 ntBASIC10.72□□□□□ -0.69
Cux1P53564 Gm43725-201ENSMUST00000200122 369 ntBASIC10.72□□□□□ -0.69
Cux1P53564 Gm44571-201ENSMUST00000208092 533 ntBASIC10.72□□□□□ -0.69
Cux1P53564 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC10.72□□□□□ -0.69
Cux1P53564 Gm37785-201ENSMUST00000195783 2408 ntBASIC10.72□□□□□ -0.69
Cux1P53564 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Cux1P53564 Kyat3-201ENSMUST00000044392 4206 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cux1P53564 Pla2r1-201ENSMUST00000112525 7112 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cux1P53564 Gm3892-202ENSMUST00000178043 3539 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cux1P53564 Gm10593-201ENSMUST00000178906 3539 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cux1P53564 Vmn1r51-203ENSMUST00000226542 4164 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Cux1P53564 Polq-201ENSMUST00000054034 8552 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cux1P53564 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC10.71□□□□□ -0.69
Cux1P53564 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cux1P53564 Cracr2a-203ENSMUST00000212051 7625 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Cux1P53564 Gm25346-201ENSMUST00000104509 128 ntBASIC10.71□□□□□ -0.69
Cux1P53564 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC10.71□□□□□ -0.69
Cux1P53564 Gm15216-201ENSMUST00000118058 277 ntBASIC10.71□□□□□ -0.69
Cux1P53564 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Cux1P53564 Gm28413-201ENSMUST00000189369 291 ntBASIC10.71□□□□□ -0.69
Cux1P53564 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC10.71□□□□□ -0.69
Cux1P53564 Gm44091-201ENSMUST00000205212 649 ntBASIC10.71□□□□□ -0.69
Cux1P53564 Gm9240-201ENSMUST00000206527 742 ntBASIC10.71□□□□□ -0.69
Cux1P53564 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC10.71□□□□□ -0.69
Cux1P53564 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC10.71□□□□□ -0.69
Cux1P53564 Umodl1-202ENSMUST00000066981 4662 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cux1P53564 Gm24621-201ENSMUST00000082679 140 ntBASIC10.71□□□□□ -0.69
Cux1P53564 AC115746.1-201ENSMUST00000228949 3617 ntBASIC10.71□□□□□ -0.69
Cux1P53564 A330032B11Rik-201ENSMUST00000180609 1919 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cux1P53564 C8a-203ENSMUST00000106808 3539 ntTSL 2 BASIC10.71□□□□□ -0.7
Cux1P53564 Kidins220-210ENSMUST00000222941 6277 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Cux1P53564 Rffl-203ENSMUST00000074515 4973 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Cux1P53564 Flna-203ENSMUST00000114299 8456 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.7
Cux1P53564 Sdk2-201ENSMUST00000041627 11287 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cux1P53564 Gm13821-201ENSMUST00000202029 3201 ntBASIC10.71□□□□□ -0.7
Cux1P53564 Rdh16-201ENSMUST00000071646 3207 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cux1P53564 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC10.71□□□□□ -0.7
Cux1P53564 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cux1P53564 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cux1P53564 Gm8844-201ENSMUST00000119460 2614 ntBASIC10.7□□□□□ -0.7
Cux1P53564 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC10.7□□□□□ -0.7
Cux1P53564 Ftx-203ENSMUST00000130063 4275 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cux1P53564 Gm16123-201ENSMUST00000118647 1517 ntBASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms