Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Gm20121-201ENSMUST00000198547 1594 ntBASIC7.73□□□□□ -1.17
Sdc2P43407 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Sdc2P43407 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Sdc2P43407 Gm5319-201ENSMUST00000118965 873 ntBASIC7.73□□□□□ -1.17
Sdc2P43407 Gm15186-201ENSMUST00000119345 563 ntBASIC7.73□□□□□ -1.17
Sdc2P43407 Gm12879-201ENSMUST00000120003 1182 ntBASIC7.73□□□□□ -1.17
Sdc2P43407 Gm12459-201ENSMUST00000120659 356 ntBASIC7.73□□□□□ -1.17
Sdc2P43407 Gm15123-201ENSMUST00000138988 339 ntTSL 3 BASIC7.73□□□□□ -1.17
Sdc2P43407 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Sdc2P43407 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC7.73□□□□□ -1.17
Sdc2P43407 Gm9697-201ENSMUST00000147052 997 ntBASIC7.73□□□□□ -1.17
Sdc2P43407 Gm25770-201ENSMUST00000158566 115 ntBASIC7.73□□□□□ -1.17
Sdc2P43407 Gm17217-201ENSMUST00000166613 469 ntBASIC7.73□□□□□ -1.17
Sdc2P43407 Gm26528-201ENSMUST00000181965 283 ntBASIC7.73□□□□□ -1.17
Sdc2P43407 Gm27019-201ENSMUST00000183056 404 ntBASIC7.73□□□□□ -1.17
Sdc2P43407 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Sdc2P43407 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC7.73□□□□□ -1.17
Sdc2P43407 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC7.73□□□□□ -1.17
Sdc2P43407 Gm45666-201ENSMUST00000211474 277 ntTSL 5 BASIC7.73□□□□□ -1.17
Sdc2P43407 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC7.73□□□□□ -1.17
Sdc2P43407 Gm17611-202ENSMUST00000220613 814 ntBASIC7.73□□□□□ -1.17
Sdc2P43407 Gm19238-201ENSMUST00000221936 1260 ntBASIC7.73□□□□□ -1.17
Sdc2P43407 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC7.73□□□□□ -1.17
Sdc2P43407 Gm21762-202ENSMUST00000225881 830 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Sdc2P43407 AC152940.1-201ENSMUST00000226504 139 ntBASIC7.73□□□□□ -1.17
Sdc2P43407 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Sdc2P43407 Gm25852-201ENSMUST00000082790 130 ntBASIC7.73□□□□□ -1.17
Sdc2P43407 Il22-201ENSMUST00000096691 1110 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Sdc2P43407 Olfr1044-201ENSMUST00000099906 945 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Sdc2P43407 Tmem100-201ENSMUST00000092788 1767 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Sdc2P43407 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC7.73□□□□□ -1.17
Sdc2P43407 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Sdc2P43407 Olfr738-202ENSMUST00000214320 2114 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Sdc2P43407 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Sdc2P43407 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Sdc2P43407 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC7.73□□□□□ -1.17
Sdc2P43407 Gm19024-201ENSMUST00000194681 1319 ntBASIC7.73□□□□□ -1.17
Sdc2P43407 Gm37163-201ENSMUST00000195439 1690 ntBASIC7.73□□□□□ -1.17
Sdc2P43407 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Sdc2P43407 AC162301.1-201ENSMUST00000228785 1542 ntBASIC7.73□□□□□ -1.17
Sdc2P43407 Zbbx-201ENSMUST00000039269 2399 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Sdc2P43407 Gm43876-201ENSMUST00000203831 3229 ntBASIC7.73□□□□□ -1.17
Sdc2P43407 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Sdc2P43407 Gm10388-201ENSMUST00000205001 2936 ntBASIC7.72□□□□□ -1.17
Sdc2P43407 Irgm1-202ENSMUST00000097271 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Sdc2P43407 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Sdc2P43407 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Sdc2P43407 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC7.72□□□□□ -1.17
Sdc2P43407 Pot1b-201ENSMUST00000086876 3499 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Sdc2P43407 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Sdc2P43407 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Sdc2P43407 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC7.72□□□□□ -1.17
Sdc2P43407 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Sdc2P43407 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
Sdc2P43407 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC7.72□□□□□ -1.17
Sdc2P43407 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC7.72□□□□□ -1.17
Sdc2P43407 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
Sdc2P43407 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Sdc2P43407 Gm7129-201ENSMUST00000117402 997 ntBASIC7.72□□□□□ -1.17
Sdc2P43407 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC7.72□□□□□ -1.17
Sdc2P43407 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC7.72□□□□□ -1.17
Sdc2P43407 Gm14241-201ENSMUST00000151260 264 ntTSL 5 BASIC7.72□□□□□ -1.17
Sdc2P43407 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Sdc2P43407 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Sdc2P43407 Gm5656-201ENSMUST00000171020 1096 ntBASIC7.72□□□□□ -1.17
Sdc2P43407 Gm20430-201ENSMUST00000172474 207 ntBASIC7.72□□□□□ -1.17
Sdc2P43407 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Sdc2P43407 Gm28958-201ENSMUST00000185864 703 ntBASIC7.72□□□□□ -1.17
Sdc2P43407 Gm23011-202ENSMUST00000197855 275 ntBASIC7.72□□□□□ -1.17
Sdc2P43407 Gm42573-201ENSMUST00000202327 478 ntBASIC7.72□□□□□ -1.17
Sdc2P43407 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC7.72□□□□□ -1.17
Sdc2P43407 Gcnt2-204ENSMUST00000223570 335 ntBASIC7.72□□□□□ -1.17
Sdc2P43407 Diaph3-204ENSMUST00000226254 682 ntBASIC7.72□□□□□ -1.17
Sdc2P43407 Tmem213-201ENSMUST00000031851 631 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Sdc2P43407 Gm6054-201ENSMUST00000078052 378 ntBASIC7.72□□□□□ -1.17
Sdc2P43407 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Sdc2P43407 Gm44186-201ENSMUST00000204118 2752 ntBASIC7.72□□□□□ -1.17
Sdc2P43407 AC156636.1-201ENSMUST00000218639 2229 ntBASIC7.72□□□□□ -1.17
Sdc2P43407 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Sdc2P43407 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Sdc2P43407 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Sdc2P43407 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Sdc2P43407 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC7.72□□□□□ -1.17
Sdc2P43407 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Sdc2P43407 2610203C20Rik-215ENSMUST00000212373 1574 ntTSL 5 BASIC7.71□□□□□ -1.17
Sdc2P43407 Gm37937-201ENSMUST00000194130 2168 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Sdc2P43407 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC7.71□□□□□ -1.17
Sdc2P43407 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
Sdc2P43407 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC7.71□□□□□ -1.17
Sdc2P43407 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
Sdc2P43407 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
Sdc2P43407 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC7.71□□□□□ -1.18
Sdc2P43407 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC7.71□□□□□ -1.18
Sdc2P43407 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Sdc2P43407 Gm6877-201ENSMUST00000119347 1101 ntBASIC7.71□□□□□ -1.18
Sdc2P43407 Gm15712-201ENSMUST00000120369 1156 ntBASIC7.71□□□□□ -1.18
Sdc2P43407 Gm12410-201ENSMUST00000124989 405 ntTSL 3 BASIC7.71□□□□□ -1.18
Sdc2P43407 Gm14319-201ENSMUST00000142937 703 ntTSL 2 BASIC7.71□□□□□ -1.18
Sdc2P43407 Fcor-201ENSMUST00000159364 392 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Sdc2P43407 Gm7502-201ENSMUST00000169235 733 ntBASIC7.71□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms