Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.13
Col2a1P28481 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.13
Col2a1P28481 Gm37689-201ENSMUST00000193139 275 ntBASIC7.96□□□□□ -1.13
Col2a1P28481 Gm7804-202ENSMUST00000194187 854 ntBASIC7.96□□□□□ -1.13
Col2a1P28481 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
Col2a1P28481 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
Col2a1P28481 AC135086.1-201ENSMUST00000228621 817 ntBASIC7.96□□□□□ -1.13
Col2a1P28481 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Col2a1P28481 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Col2a1P28481 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC7.96□□□□□ -1.13
Col2a1P28481 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC7.96□□□□□ -1.13
Col2a1P28481 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC7.96□□□□□ -1.14
Col2a1P28481 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Col2a1P28481 Pinc-201ENSMUST00000190229 2170 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Col2a1P28481 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Col2a1P28481 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Col2a1P28481 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Col2a1P28481 Gm45017-201ENSMUST00000206842 1777 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Col2a1P28481 Gm43410-201ENSMUST00000197510 2234 ntBASIC7.96□□□□□ -1.14
Col2a1P28481 Cfap46-202ENSMUST00000129990 8180 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
Col2a1P28481 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Col2a1P28481 Zkscan8-201ENSMUST00000045228 8805 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.14
Col2a1P28481 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.14
Col2a1P28481 Glmp-209ENSMUST00000177005 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Col2a1P28481 AC129308.2-203ENSMUST00000224109 2385 ntBASIC7.96□□□□□ -1.14
Col2a1P28481 Bcat1-201ENSMUST00000032402 7833 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Col2a1P28481 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Col2a1P28481 Gm9226-201ENSMUST00000188352 3489 ntBASIC7.96□□□□□ -1.14
Col2a1P28481 Gm21152-201ENSMUST00000190271 3483 ntBASIC7.96□□□□□ -1.14
Col2a1P28481 Slitrk4-201ENSMUST00000069926 8494 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Col2a1P28481 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Col2a1P28481 Clasp2-207ENSMUST00000214522 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
Col2a1P28481 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
Col2a1P28481 Fbxo7-204ENSMUST00000130320 5388 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.14
Col2a1P28481 Ercc6-201ENSMUST00000066807 8423 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Col2a1P28481 Gm42679-201ENSMUST00000197086 2906 ntBASIC7.95□□□□□ -1.14
Col2a1P28481 BC106179-201ENSMUST00000055369 4128 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Col2a1P28481 Bmx-202ENSMUST00000112265 3005 ntAPPRIS P2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Col2a1P28481 Tbc1d8b-201ENSMUST00000096313 5094 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Col2a1P28481 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Col2a1P28481 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Col2a1P28481 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC7.95□□□□□ -1.14
Col2a1P28481 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
Col2a1P28481 Gm12939-201ENSMUST00000117303 165 ntBASIC7.95□□□□□ -1.14
Col2a1P28481 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC7.95□□□□□ -1.14
Col2a1P28481 Gm13357-201ENSMUST00000120528 537 ntBASIC7.95□□□□□ -1.14
Col2a1P28481 Gm7494-201ENSMUST00000121248 441 ntBASIC7.95□□□□□ -1.14
Col2a1P28481 Gm12101-201ENSMUST00000121590 390 ntBASIC7.95□□□□□ -1.14
Col2a1P28481 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC7.95□□□□□ -1.14
Col2a1P28481 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC7.95□□□□□ -1.14
Col2a1P28481 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC7.95□□□□□ -1.14
Col2a1P28481 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
Col2a1P28481 Gm37637-201ENSMUST00000195540 1256 ntBASIC7.95□□□□□ -1.14
Col2a1P28481 Gm19088-201ENSMUST00000198800 566 ntBASIC7.95□□□□□ -1.14
Col2a1P28481 Gm7463-201ENSMUST00000201541 547 ntBASIC7.95□□□□□ -1.14
Col2a1P28481 Gm45394-201ENSMUST00000209240 1175 ntBASIC7.95□□□□□ -1.14
Col2a1P28481 Gm45899-201ENSMUST00000212196 1276 ntBASIC7.95□□□□□ -1.14
Col2a1P28481 AC158750.1-201ENSMUST00000226163 634 ntBASIC7.95□□□□□ -1.14
Col2a1P28481 CT010453.2-201ENSMUST00000227005 483 ntBASIC7.95□□□□□ -1.14
Col2a1P28481 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Col2a1P28481 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC7.95□□□□□ -1.14
Col2a1P28481 Olfr448-201ENSMUST00000058668 933 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Col2a1P28481 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Col2a1P28481 Gm24621-201ENSMUST00000082679 140 ntBASIC7.95□□□□□ -1.14
Col2a1P28481 Gm15834-202ENSMUST00000139825 2613 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Col2a1P28481 Gm43728-201ENSMUST00000198817 2622 ntBASIC7.95□□□□□ -1.14
Col2a1P28481 Gm37138-201ENSMUST00000194564 2089 ntBASIC7.95□□□□□ -1.14
Col2a1P28481 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Col2a1P28481 Gm16123-201ENSMUST00000118647 1517 ntBASIC7.95□□□□□ -1.14
Col2a1P28481 Snhg17-209ENSMUST00000186993 3144 ntBASIC7.95□□□□□ -1.14
Col2a1P28481 AC159264.1-202ENSMUST00000224856 3162 ntBASIC7.95□□□□□ -1.14
Col2a1P28481 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Col2a1P28481 C130071C03Rik-201ENSMUST00000131907 3590 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Col2a1P28481 Ank3-247ENSMUST00000218680 5500 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
Col2a1P28481 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
Col2a1P28481 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC7.95□□□□□ -1.14
Col2a1P28481 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Col2a1P28481 Tcf4-207ENSMUST00000114985 8577 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Col2a1P28481 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Col2a1P28481 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col2a1P28481 Gm26340-201ENSMUST00000102365 99 ntBASIC7.94□□□□□ -1.14
Col2a1P28481 Gm20615-201ENSMUST00000177503 705 ntBASIC7.94□□□□□ -1.14
Col2a1P28481 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC7.94□□□□□ -1.14
Col2a1P28481 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC7.94□□□□□ -1.14
Col2a1P28481 Gm27804-201ENSMUST00000185135 119 ntBASIC7.94□□□□□ -1.14
Col2a1P28481 Ighv8-3-201ENSMUST00000194985 295 ntBASIC7.94□□□□□ -1.14
Col2a1P28481 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Col2a1P28481 Gm29784-201ENSMUST00000196217 406 ntBASIC7.94□□□□□ -1.14
Col2a1P28481 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC7.94□□□□□ -1.14
Col2a1P28481 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC7.94□□□□□ -1.14
Col2a1P28481 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC7.94□□□□□ -1.14
Col2a1P28481 Gm8190-201ENSMUST00000199603 586 ntBASIC7.94□□□□□ -1.14
Col2a1P28481 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC7.94□□□□□ -1.14
Col2a1P28481 AC091237.1-201ENSMUST00000224911 637 ntBASIC7.94□□□□□ -1.14
Col2a1P28481 AC132260.1-201ENSMUST00000225499 734 ntBASIC7.94□□□□□ -1.14
Col2a1P28481 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col2a1P28481 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Col2a1P28481 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC7.94□□□□□ -1.14
Col2a1P28481 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col2a1P28481 Gm8177-201ENSMUST00000181591 1336 ntBASIC7.94□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms