Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC6.25□□□□□ -1.41
P20040 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC6.25□□□□□ -1.41
P20040 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC6.25□□□□□ -1.41
P20040 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
P20040 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
P20040 AC152922.2-201ENSMUST00000213353 3879 ntBASIC6.25□□□□□ -1.41
P20040 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC6.24□□□□□ -1.41
P20040 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
P20040 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
P20040 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
P20040 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
P20040 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC6.24□□□□□ -1.41
P20040 Gm37945-201ENSMUST00000192536 4367 ntBASIC6.24□□□□□ -1.41
P20040 AC129085.2-201ENSMUST00000223763 2800 ntBASIC6.24□□□□□ -1.41
P20040 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
P20040 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
P20040 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
P20040 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
P20040 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
P20040 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC6.24□□□□□ -1.41
P20040 Cypt3-202ENSMUST00000112573 669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
P20040 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC6.24□□□□□ -1.41
P20040 Gm5255-201ENSMUST00000120125 642 ntBASIC6.24□□□□□ -1.41
P20040 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
P20040 Sh3d2c-ps1-201ENSMUST00000121498 904 ntBASIC6.24□□□□□ -1.41
P20040 Gm12630-201ENSMUST00000121575 784 ntBASIC6.24□□□□□ -1.41
P20040 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC6.24□□□□□ -1.41
P20040 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC6.24□□□□□ -1.41
P20040 Rsf1os1-201ENSMUST00000126902 324 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
P20040 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC6.24□□□□□ -1.41
P20040 Gm13421-202ENSMUST00000142511 803 ntTSL 3 BASIC6.24□□□□□ -1.41
P20040 Gm12371-201ENSMUST00000144029 1091 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
P20040 Gm13840-201ENSMUST00000149608 256 ntTSL 2 BASIC6.24□□□□□ -1.41
P20040 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC6.24□□□□□ -1.41
P20040 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC6.24□□□□□ -1.41
P20040 9530018H14Rik-201ENSMUST00000192253 1243 ntBASIC6.24□□□□□ -1.41
P20040 2010103J01Rik-201ENSMUST00000192375 388 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
P20040 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC6.24□□□□□ -1.41
P20040 Gm37907-201ENSMUST00000195644 846 ntTSL 5 BASIC6.24□□□□□ -1.41
P20040 Shisa5-214ENSMUST00000198708 771 ntTSL 5 BASIC6.24□□□□□ -1.41
P20040 Gm21040-201ENSMUST00000199493 1132 ntBASIC6.24□□□□□ -1.41
P20040 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC6.24□□□□□ -1.41
P20040 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
P20040 Gm44931-201ENSMUST00000206056 545 ntBASIC6.24□□□□□ -1.41
P20040 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC6.24□□□□□ -1.41
P20040 AC160114.3-201ENSMUST00000222256 560 ntTSL 5 BASIC6.24□□□□□ -1.41
P20040 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
P20040 Slxl1-201ENSMUST00000088740 730 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
P20040 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC6.24□□□□□ -1.41
P20040 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
P20040 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
P20040 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
P20040 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
P20040 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
P20040 Tpp1-201ENSMUST00000033184 3558 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
P20040 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
P20040 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
P20040 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
P20040 Gm8212-201ENSMUST00000166350 1404 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
P20040 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
P20040 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
P20040 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
P20040 Gm38276-201ENSMUST00000192446 1343 ntBASIC6.24□□□□□ -1.41
P20040 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
P20040 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
P20040 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
P20040 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
P20040 Gm37382-201ENSMUST00000193032 1596 ntBASIC6.23□□□□□ -1.41
P20040 Gm20121-201ENSMUST00000198547 1594 ntBASIC6.23□□□□□ -1.41
P20040 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
P20040 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
P20040 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
P20040 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC6.23□□□□□ -1.41
P20040 Gm28667-201ENSMUST00000189873 2171 ntBASIC6.23□□□□□ -1.41
P20040 Gm9403-201ENSMUST00000196299 2181 ntBASIC6.23□□□□□ -1.41
P20040 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
P20040 Gm13414-201ENSMUST00000117516 727 ntBASIC6.23□□□□□ -1.41
P20040 Gm15616-201ENSMUST00000118662 375 ntBASIC6.23□□□□□ -1.41
P20040 Gm11945-201ENSMUST00000120551 476 ntBASIC6.23□□□□□ -1.41
P20040 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC6.23□□□□□ -1.41
P20040 Gm17032-201ENSMUST00000164367 338 ntTSL 3 BASIC6.23□□□□□ -1.41
P20040 Mir3060-201ENSMUST00000175339 83 ntBASIC6.23□□□□□ -1.41
P20040 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
P20040 Gm29129-201ENSMUST00000191121 659 ntTSL 3 BASIC6.23□□□□□ -1.41
P20040 Gm37295-201ENSMUST00000192186 109 ntBASIC6.23□□□□□ -1.41
P20040 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC6.23□□□□□ -1.41
P20040 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
P20040 Gm44044-201ENSMUST00000205178 1089 ntBASIC6.23□□□□□ -1.41
P20040 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
P20040 Olfr706-201ENSMUST00000209025 1087 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
P20040 Gm45282-201ENSMUST00000209439 681 ntTSL 3 BASIC6.23□□□□□ -1.41
P20040 Gm6667-201ENSMUST00000217169 564 ntBASIC6.23□□□□□ -1.41
P20040 CT030175.1-201ENSMUST00000220822 408 ntBASIC6.23□□□□□ -1.41
P20040 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC6.23□□□□□ -1.41
P20040 AC126554.3-201ENSMUST00000223131 493 ntBASIC6.23□□□□□ -1.41
P20040 CT025639.2-201ENSMUST00000224440 1220 ntBASIC6.23□□□□□ -1.41
P20040 AC125019.1-201ENSMUST00000224809 908 ntBASIC6.23□□□□□ -1.41
P20040 AC121997.2-202ENSMUST00000227158 939 ntBASIC6.23□□□□□ -1.41
P20040 AC140451.1-201ENSMUST00000227984 737 ntBASIC6.23□□□□□ -1.41
P20040 Olfr101-201ENSMUST00000058046 1039 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms