Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC6.98□□□□□ -1.29
Lire1P11260 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC6.98□□□□□ -1.29
Lire1P11260 Gm45174-201ENSMUST00000208884 3065 ntBASIC6.98□□□□□ -1.29
Lire1P11260 4933406K04Rik-203ENSMUST00000135423 1391 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Lire1P11260 Gm15229-201ENSMUST00000146636 1398 ntBASIC6.98□□□□□ -1.29
Lire1P11260 Zfp52-201ENSMUST00000079242 2175 ntAPPRIS P1 TSL 3 BASIC6.98□□□□□ -1.29
Lire1P11260 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Lire1P11260 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Lire1P11260 Gm24986-201ENSMUST00000104452 132 ntBASIC6.98□□□□□ -1.29
Lire1P11260 Eqtn-202ENSMUST00000107097 1164 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Lire1P11260 Prh1-202ENSMUST00000111972 870 ntAPPRIS P2 TSL 5 BASIC6.98□□□□□ -1.29
Lire1P11260 Rhox4g-201ENSMUST00000115166 979 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Lire1P11260 Gm12365-201ENSMUST00000117931 568 ntBASIC6.98□□□□□ -1.29
Lire1P11260 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Lire1P11260 A630023P12Rik-202ENSMUST00000141420 495 ntTSL 2 BASIC6.98□□□□□ -1.29
Lire1P11260 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Lire1P11260 4933427D06Rik-202ENSMUST00000153517 522 ntTSL 5 BASIC6.98□□□□□ -1.29
Lire1P11260 Gtsf1-209ENSMUST00000153930 799 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Lire1P11260 Gm12484-201ENSMUST00000156311 581 ntTSL 5 BASIC6.98□□□□□ -1.29
Lire1P11260 Gm25437-201ENSMUST00000158282 132 ntBASIC6.98□□□□□ -1.29
Lire1P11260 AI480526-201ENSMUST00000159072 957 ntTSL 2 BASIC6.98□□□□□ -1.29
Lire1P11260 Serpina4-ps1-201ENSMUST00000166601 1287 ntBASIC6.98□□□□□ -1.29
Lire1P11260 Svs5-201ENSMUST00000017148 628 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Lire1P11260 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Lire1P11260 Gm27435-201ENSMUST00000183588 88 ntBASIC6.98□□□□□ -1.29
Lire1P11260 Gm27177-204ENSMUST00000184491 602 ntTSL 3 BASIC6.98□□□□□ -1.29
Lire1P11260 Mir8095-201ENSMUST00000185103 129 ntBASIC6.98□□□□□ -1.29
Lire1P11260 Gm8883-202ENSMUST00000188258 545 ntTSL 3 BASIC6.98□□□□□ -1.29
Lire1P11260 Gm36932-201ENSMUST00000195226 929 ntBASIC6.98□□□□□ -1.29
Lire1P11260 Gm42646-201ENSMUST00000202233 914 ntBASIC6.98□□□□□ -1.29
Lire1P11260 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC6.98□□□□□ -1.29
Lire1P11260 Gm44823-201ENSMUST00000204775 1107 ntBASIC6.98□□□□□ -1.29
Lire1P11260 AC162183.1-202ENSMUST00000225434 904 ntBASIC6.98□□□□□ -1.29
Lire1P11260 AC122035.2-201ENSMUST00000228698 462 ntBASIC6.98□□□□□ -1.29
Lire1P11260 Tas2r116-201ENSMUST00000032315 918 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Lire1P11260 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
Lire1P11260 Prh1-201ENSMUST00000074042 819 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Lire1P11260 AC158115.1-201ENSMUST00000222830 3182 ntBASIC6.98□□□□□ -1.29
Lire1P11260 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Lire1P11260 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Lire1P11260 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Lire1P11260 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Lire1P11260 Tex21-201ENSMUST00000021453 2137 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Lire1P11260 Olfr305-203ENSMUST00000213869 3530 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Lire1P11260 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Lire1P11260 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
Lire1P11260 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC6.98□□□□□ -1.29
Lire1P11260 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Lire1P11260 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Lire1P11260 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Lire1P11260 Sos2-203ENSMUST00000182396 3963 ntTSL 5 BASIC6.98□□□□□ -1.29
Lire1P11260 Gimap6-202ENSMUST00000119315 3179 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Lire1P11260 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Lire1P11260 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Lire1P11260 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Lire1P11260 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Lire1P11260 Zscan18-203ENSMUST00000210650 3668 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Lire1P11260 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Lire1P11260 Psmf1-201ENSMUST00000042452 3809 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Lire1P11260 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Lire1P11260 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
Lire1P11260 Gm31267-201ENSMUST00000218941 1397 ntTSL 3 BASIC6.97□□□□□ -1.29
Lire1P11260 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Lire1P11260 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
Lire1P11260 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Lire1P11260 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Lire1P11260 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Lire1P11260 Gm43430-201ENSMUST00000196513 3897 ntBASIC6.97□□□□□ -1.29
Lire1P11260 Gm43429-201ENSMUST00000197889 2251 ntBASIC6.97□□□□□ -1.29
Lire1P11260 Olfr212-202ENSMUST00000218028 2291 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Lire1P11260 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Lire1P11260 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Lire1P11260 Gmfg-202ENSMUST00000108289 477 ntTSL 3 BASIC6.97□□□□□ -1.29
Lire1P11260 Gm15578-201ENSMUST00000117320 475 ntBASIC6.97□□□□□ -1.29
Lire1P11260 Gm13252-201ENSMUST00000119355 321 ntBASIC6.97□□□□□ -1.29
Lire1P11260 Gm12773-201ENSMUST00000120134 587 ntBASIC6.97□□□□□ -1.29
Lire1P11260 Gm14065-201ENSMUST00000120848 585 ntBASIC6.97□□□□□ -1.29
Lire1P11260 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC6.97□□□□□ -1.29
Lire1P11260 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC6.97□□□□□ -1.29
Lire1P11260 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Lire1P11260 Gm9141-201ENSMUST00000159355 1007 ntBASIC6.97□□□□□ -1.29
Lire1P11260 Ly6k-202ENSMUST00000168815 612 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Lire1P11260 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC6.97□□□□□ -1.29
Lire1P11260 Gm23639-201ENSMUST00000175078 132 ntBASIC6.97□□□□□ -1.29
Lire1P11260 4930533D04Rik-201ENSMUST00000185478 788 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Lire1P11260 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
Lire1P11260 Gm38337-201ENSMUST00000193986 599 ntBASIC6.97□□□□□ -1.29
Lire1P11260 Gm18428-201ENSMUST00000194986 791 ntBASIC6.97□□□□□ -1.29
Lire1P11260 Lamtor3-203ENSMUST00000197064 733 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
Lire1P11260 Gm20223-201ENSMUST00000199932 805 ntBASIC6.97□□□□□ -1.29
Lire1P11260 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC6.97□□□□□ -1.29
Lire1P11260 Gm43812-202ENSMUST00000202701 581 ntBASIC6.97□□□□□ -1.29
Lire1P11260 Gm44892-201ENSMUST00000208595 488 ntBASIC6.97□□□□□ -1.29
Lire1P11260 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC6.97□□□□□ -1.29
Lire1P11260 9230112J17Rik-201ENSMUST00000216749 2333 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Lire1P11260 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC6.97□□□□□ -1.29
Lire1P11260 AC131029.2-203ENSMUST00000228116 1244 ntBASIC6.97□□□□□ -1.29
Lire1P11260 AC154838.3-201ENSMUST00000228876 965 ntBASIC6.97□□□□□ -1.29
Lire1P11260 Ifitm5-201ENSMUST00000026562 765 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Lire1P11260 Olfr1322-201ENSMUST00000070304 933 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 123 ms