Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Olfr1445-201ENSMUST00000049624 1001 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Pcdh1F7BJK1 Itgae-201ENSMUST00000006101 3845 ntAPPRIS P4 TSL 1 (best) BASIC6.8□□□□□ -1.32
Pcdh1F7BJK1 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC6.8□□□□□ -1.32
Pcdh1F7BJK1 Olfr1377-201ENSMUST00000075177 1063 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Pcdh1F7BJK1 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Pcdh1F7BJK1 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC6.8□□□□□ -1.32
Pcdh1F7BJK1 Olfr1306-201ENSMUST00000099607 939 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Pcdh1F7BJK1 Olfr1179-201ENSMUST00000099825 924 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Pcdh1F7BJK1 Gm37080-201ENSMUST00000194804 2404 ntBASIC6.8□□□□□ -1.32
Pcdh1F7BJK1 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Pcdh1F7BJK1 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Pcdh1F7BJK1 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Pcdh1F7BJK1 Gm18957-201ENSMUST00000197623 1813 ntBASIC6.8□□□□□ -1.32
Pcdh1F7BJK1 Gm7648-201ENSMUST00000173036 1658 ntBASIC6.8□□□□□ -1.32
Pcdh1F7BJK1 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Pcdh1F7BJK1 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Pcdh1F7BJK1 Gm12253-201ENSMUST00000108825 1356 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Pcdh1F7BJK1 Sos2-203ENSMUST00000182396 3963 ntTSL 5 BASIC6.8□□□□□ -1.32
Pcdh1F7BJK1 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Pcdh1F7BJK1 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Mcf2l-205ENSMUST00000110871 3401 ntTSL 5 BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Gm1976-202ENSMUST00000182639 1853 ntTSL 2 BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Klf8-202ENSMUST00000112574 4752 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Olfr131-204ENSMUST00000216523 1714 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Gm14226-201ENSMUST00000130870 3243 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Gm31614-201ENSMUST00000215504 3231 ntTSL 5 BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Mir704-201ENSMUST00000102106 77 ntBASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Cep41-202ENSMUST00000115130 485 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Gm15220-201ENSMUST00000120730 379 ntBASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Scarna17-201ENSMUST00000158064 79 ntBASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Gm24347-201ENSMUST00000158711 142 ntBASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Gm24369-201ENSMUST00000175387 96 ntBASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Gm26784-201ENSMUST00000181666 410 ntBASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Gm27160-201ENSMUST00000184837 199 ntBASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Gm28688-201ENSMUST00000187301 268 ntBASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Mir1892-201ENSMUST00000197752 80 ntBASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 D830044I16Rik-203ENSMUST00000205437 1016 ntAPPRIS P5 TSL 5 BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Cyb5r2-202ENSMUST00000208217 1178 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Gm5535-206ENSMUST00000210067 679 ntTSL 5 BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Gm45551-201ENSMUST00000211459 928 ntBASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Gm33103-201ENSMUST00000212717 527 ntTSL 3 BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 AC161877.2-201ENSMUST00000226248 545 ntBASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Glycam1-203ENSMUST00000228060 528 ntAPPRIS ALT2 BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Cox8c-201ENSMUST00000053611 458 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 1700028K03Rik-201ENSMUST00000058921 797 ntAPPRIS P3 TSL 2 BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Olfr675-201ENSMUST00000073102 942 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Gm22575-201ENSMUST00000082981 110 ntBASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Wfdc13-201ENSMUST00000088260 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Olfr1226-201ENSMUST00000099790 933 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Mapk10-203ENSMUST00000112847 7196 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Dpep2-202ENSMUST00000117555 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Gm17083-201ENSMUST00000165849 1366 ntBASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Olfr1122-202ENSMUST00000215371 5036 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Gas2l3-202ENSMUST00000105298 6305 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Musk-205ENSMUST00000102893 3323 ntTSL 5 BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Gm45250-201ENSMUST00000209414 3592 ntBASIC6.79□□□□□ -1.32
Pcdh1F7BJK1 Olfr702-204ENSMUST00000219803 1646 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms