Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm38077-201ENSMUST00000193657 3245 ntBASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Gm18726-201ENSMUST00000218175 2010 ntBASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Gm43168-201ENSMUST00000201039 1612 ntBASIC6.69□□□□□ -1.34
Trim3Q9R1R2 AC124581.3-201ENSMUST00000224270 1624 ntBASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Gm8212-201ENSMUST00000166350 1404 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Trim3Q9R1R2 AC166574.5-201ENSMUST00000227438 1432 ntBASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Trim3Q9R1R2 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC6.69□□□□□ -1.34
Trim3Q9R1R2 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Gm38120-201ENSMUST00000195506 4642 ntBASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Ighv1-63-201ENSMUST00000103534 351 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Gm23485-201ENSMUST00000104181 155 ntBASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Gm26016-201ENSMUST00000104403 129 ntBASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Olfr1396-202ENSMUST00000109201 1170 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Gm17184-201ENSMUST00000111864 462 ntBASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Rhox3c-201ENSMUST00000115188 1053 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Gm16044-201ENSMUST00000118475 450 ntBASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Gm15644-201ENSMUST00000121764 387 ntBASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Gm4887-201ENSMUST00000122230 1053 ntBASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Gm2735-201ENSMUST00000136133 277 ntBASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Gm12911-201ENSMUST00000140639 703 ntTSL 3 BASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Mir1981-201ENSMUST00000157934 82 ntBASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Gm5611-201ENSMUST00000164523 852 ntBASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Mir8094-201ENSMUST00000183361 117 ntBASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Zfp572-202ENSMUST00000184208 1078 ntBASIC6.69□□□□□ -1.34
Trim3Q9R1R2 1700028B04Rik-201ENSMUST00000186274 555 ntBASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Gm38256-201ENSMUST00000192097 950 ntTSL 5 BASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Gm43664-201ENSMUST00000196038 734 ntBASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Shisa5-214ENSMUST00000198708 771 ntTSL 5 BASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Gm43929-201ENSMUST00000203025 409 ntBASIC6.69□□□□□ -1.34
Trim3Q9R1R2 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Gm39075-201ENSMUST00000206031 512 ntTSL 5 BASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Gm7419-201ENSMUST00000209962 925 ntBASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC6.69□□□□□ -1.34
Trim3Q9R1R2 AC118476.2-201ENSMUST00000215206 757 ntTSL 3 BASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Gm6667-201ENSMUST00000217169 564 ntBASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Rbp7-201ENSMUST00000030848 619 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Vmn2r45-201ENSMUST00000164845 3619 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Trim3Q9R1R2 AC154522.1-201ENSMUST00000224647 1903 ntBASIC6.69□□□□□ -1.34
Trim3Q9R1R2 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Trim3Q9R1R2 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC6.69□□□□□ -1.34
Trim3Q9R1R2 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC6.69□□□□□ -1.34
Trim3Q9R1R2 AC107742.1-201ENSMUST00000227769 1390 ntBASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Gm37621-201ENSMUST00000194716 5531 ntBASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Trim3Q9R1R2 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim3Q9R1R2 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Trim3Q9R1R2 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
Trim3Q9R1R2 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Trim3Q9R1R2 Gm37653-201ENSMUST00000195401 3578 ntBASIC6.68□□□□□ -1.34
Trim3Q9R1R2 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
Trim3Q9R1R2 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
Trim3Q9R1R2 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
Trim3Q9R1R2 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim3Q9R1R2 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Trim3Q9R1R2 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC6.68□□□□□ -1.34
Trim3Q9R1R2 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Trim3Q9R1R2 Zfp420-201ENSMUST00000057652 2744 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim3Q9R1R2 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim3Q9R1R2 AC122346.1-201ENSMUST00000225266 3732 ntBASIC6.68□□□□□ -1.34
Trim3Q9R1R2 Gm36981-201ENSMUST00000192340 4485 ntBASIC6.68□□□□□ -1.34
Trim3Q9R1R2 Rnase4-201ENSMUST00000022428 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim3Q9R1R2 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim3Q9R1R2 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC6.68□□□□□ -1.34
Trim3Q9R1R2 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim3Q9R1R2 Serpina3h-202ENSMUST00000116393 1226 ntBASIC6.68□□□□□ -1.34
Trim3Q9R1R2 Gm11517-201ENSMUST00000119491 387 ntBASIC6.68□□□□□ -1.34
Trim3Q9R1R2 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Trim3Q9R1R2 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Trim3Q9R1R2 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Trim3Q9R1R2 Gm12371-201ENSMUST00000144029 1091 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Trim3Q9R1R2 Gm22795-201ENSMUST00000157233 118 ntBASIC6.68□□□□□ -1.34
Trim3Q9R1R2 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Trim3Q9R1R2 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC6.68□□□□□ -1.34
Trim3Q9R1R2 Gm26729-201ENSMUST00000180744 352 ntBASIC6.68□□□□□ -1.34
Trim3Q9R1R2 B230104I21Rik-201ENSMUST00000181143 876 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim3Q9R1R2 Gm27401-201ENSMUST00000184052 173 ntBASIC6.68□□□□□ -1.34
Trim3Q9R1R2 Gm27596-201ENSMUST00000185061 83 ntBASIC6.68□□□□□ -1.34
Trim3Q9R1R2 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC6.68□□□□□ -1.34
Trim3Q9R1R2 Gm8883-202ENSMUST00000188258 545 ntTSL 3 BASIC6.68□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms