Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gm14471-201ENSMUST00000141035 2358 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Chmp2aQ9DB34 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Chmp2aQ9DB34 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Chmp2aQ9DB34 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Chmp2aQ9DB34 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Chmp2aQ9DB34 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Chmp2aQ9DB34 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Chmp2aQ9DB34 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Chmp2aQ9DB34 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Chmp2aQ9DB34 Gm29761-201ENSMUST00000215964 1939 ntBASIC7.33□□□□□ -1.24
Chmp2aQ9DB34 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Chmp2aQ9DB34 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Chmp2aQ9DB34 Olfr115-203ENSMUST00000223366 2273 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
Chmp2aQ9DB34 Efcab7-201ENSMUST00000097959 1713 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Chmp2aQ9DB34 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Chmp2aQ9DB34 Olfr480-202ENSMUST00000217653 1876 ntAPPRIS P1 TSL 3 BASIC7.32□□□□□ -1.24
Chmp2aQ9DB34 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Chmp2aQ9DB34 Ubl7-209ENSMUST00000216925 1319 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Chmp2aQ9DB34 CT009604.1-201ENSMUST00000223900 1328 ntBASIC7.32□□□□□ -1.24
Chmp2aQ9DB34 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Chmp2aQ9DB34 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Chmp2aQ9DB34 Zfp473-202ENSMUST00000118162 3091 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Chmp2aQ9DB34 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Chmp2aQ9DB34 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Chmp2aQ9DB34 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Chmp2aQ9DB34 Gip-201ENSMUST00000103156 607 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Chmp2aQ9DB34 Trav13n-4-201ENSMUST00000103634 267 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Chmp2aQ9DB34 Gm22671-201ENSMUST00000104420 134 ntBASIC7.32□□□□□ -1.24
Chmp2aQ9DB34 Gm14180-201ENSMUST00000105066 78 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Chmp2aQ9DB34 Gm15203-201ENSMUST00000117668 455 ntBASIC7.32□□□□□ -1.24
Chmp2aQ9DB34 Gm25178-201ENSMUST00000122633 325 ntBASIC7.32□□□□□ -1.24
Chmp2aQ9DB34 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Chmp2aQ9DB34 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Chmp2aQ9DB34 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC7.32□□□□□ -1.24
Chmp2aQ9DB34 Gm26183-201ENSMUST00000157685 139 ntBASIC7.32□□□□□ -1.24
Chmp2aQ9DB34 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Chmp2aQ9DB34 Gm43656-201ENSMUST00000197882 434 ntBASIC7.32□□□□□ -1.24
Chmp2aQ9DB34 Gm18593-201ENSMUST00000200754 1139 ntBASIC7.32□□□□□ -1.24
Chmp2aQ9DB34 Gm44943-201ENSMUST00000207254 300 ntBASIC7.32□□□□□ -1.24
Chmp2aQ9DB34 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Chmp2aQ9DB34 AC151971.2-201ENSMUST00000217540 909 ntBASIC7.32□□□□□ -1.24
Chmp2aQ9DB34 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC7.32□□□□□ -1.24
Chmp2aQ9DB34 AC161374.1-201ENSMUST00000224191 794 ntBASIC7.32□□□□□ -1.24
Chmp2aQ9DB34 AC138604.2-201ENSMUST00000226620 921 ntBASIC7.32□□□□□ -1.24
Chmp2aQ9DB34 Olfr1416-201ENSMUST00000086837 939 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Chmp2aQ9DB34 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Chmp2aQ9DB34 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Chmp2aQ9DB34 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Chmp2aQ9DB34 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Chmp2aQ9DB34 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Chmp2aQ9DB34 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Chmp2aQ9DB34 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Chmp2aQ9DB34 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Chmp2aQ9DB34 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
Chmp2aQ9DB34 Gm37783-201ENSMUST00000192025 1856 ntBASIC7.32□□□□□ -1.24
Chmp2aQ9DB34 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Chmp2aQ9DB34 Gm20754-202ENSMUST00000192642 1357 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Chmp2aQ9DB34 Gm45358-201ENSMUST00000209492 2305 ntBASIC7.32□□□□□ -1.24
Chmp2aQ9DB34 CT009757.6-201ENSMUST00000220661 2312 ntBASIC7.32□□□□□ -1.24
Chmp2aQ9DB34 Zrsr1-201ENSMUST00000049506 3282 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Chmp2aQ9DB34 Fetub-202ENSMUST00000116625 1338 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Chmp2aQ9DB34 Kcne3-203ENSMUST00000178946 1323 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Chmp2aQ9DB34 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Chmp2aQ9DB34 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Chmp2aQ9DB34 4933411E06Rik-201ENSMUST00000186016 1493 ntBASIC7.31□□□□□ -1.24
Chmp2aQ9DB34 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Chmp2aQ9DB34 4933416E14Rik-202ENSMUST00000137955 1938 ntBASIC7.31□□□□□ -1.24
Chmp2aQ9DB34 Akap7-201ENSMUST00000041984 2092 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Chmp2aQ9DB34 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
Chmp2aQ9DB34 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Chmp2aQ9DB34 3110043O21Rik-201ENSMUST00000084724 3413 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Chmp2aQ9DB34 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Chmp2aQ9DB34 Sla-201ENSMUST00000100572 2626 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
Chmp2aQ9DB34 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
Chmp2aQ9DB34 Gm13900-201ENSMUST00000119402 498 ntBASIC7.31□□□□□ -1.24
Chmp2aQ9DB34 Gm8421-201ENSMUST00000119439 305 ntBASIC7.31□□□□□ -1.24
Chmp2aQ9DB34 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC7.31□□□□□ -1.24
Chmp2aQ9DB34 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC7.31□□□□□ -1.24
Chmp2aQ9DB34 Gm16330-201ENSMUST00000128324 297 ntBASIC7.31□□□□□ -1.24
Chmp2aQ9DB34 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC7.31□□□□□ -1.24
Chmp2aQ9DB34 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC7.31□□□□□ -1.24
Chmp2aQ9DB34 Gm24286-201ENSMUST00000157632 128 ntBASIC7.31□□□□□ -1.24
Chmp2aQ9DB34 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Chmp2aQ9DB34 n-R5s93-201ENSMUST00000180091 119 ntBASIC7.31□□□□□ -1.24
Chmp2aQ9DB34 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Chmp2aQ9DB34 Gm21292-202ENSMUST00000190329 1225 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Chmp2aQ9DB34 Gm9419-201ENSMUST00000200672 567 ntBASIC7.31□□□□□ -1.24
Chmp2aQ9DB34 Erh-204ENSMUST00000218364 665 ntTSL 3 BASIC7.31□□□□□ -1.24
Chmp2aQ9DB34 Gm8275-201ENSMUST00000219732 424 ntBASIC7.31□□□□□ -1.24
Chmp2aQ9DB34 AC129308.1-201ENSMUST00000223800 2309 ntBASIC7.31□□□□□ -1.24
Chmp2aQ9DB34 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Chmp2aQ9DB34 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Chmp2aQ9DB34 Gm9800-201ENSMUST00000052615 336 ntBASIC7.31□□□□□ -1.24
Chmp2aQ9DB34 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Chmp2aQ9DB34 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
Chmp2aQ9DB34 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Chmp2aQ9DB34 Gm44797-201ENSMUST00000208780 1837 ntBASIC7.31□□□□□ -1.24
Chmp2aQ9DB34 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC7.31□□□□□ -1.24
Chmp2aQ9DB34 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Chmp2aQ9DB34 AC154747.4-203ENSMUST00000225893 1384 ntBASIC7.31□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms