Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Kat6a-201ENSMUST00000044331 9113 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Trim42Q9D2H5 Snord70-201ENSMUST00000104157 87 ntBASIC7.9□□□□□ -1.14
Trim42Q9D2H5 Efcab9-202ENSMUST00000109377 615 ntAPPRIS ALT2 TSL 3 BASIC7.9□□□□□ -1.14
Trim42Q9D2H5 Gm4596-201ENSMUST00000117197 442 ntBASIC7.9□□□□□ -1.14
Trim42Q9D2H5 Gm15186-201ENSMUST00000119345 563 ntBASIC7.9□□□□□ -1.14
Trim42Q9D2H5 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC7.9□□□□□ -1.14
Trim42Q9D2H5 Gm14741-201ENSMUST00000120777 1009 ntBASIC7.9□□□□□ -1.14
Trim42Q9D2H5 Gm11260-201ENSMUST00000121163 942 ntBASIC7.9□□□□□ -1.14
Trim42Q9D2H5 Gm13459-201ENSMUST00000121558 646 ntBASIC7.9□□□□□ -1.14
Trim42Q9D2H5 Gm14411-201ENSMUST00000121798 914 ntBASIC7.9□□□□□ -1.14
Trim42Q9D2H5 Gm4908-201ENSMUST00000121923 1005 ntBASIC7.9□□□□□ -1.14
Trim42Q9D2H5 Gm12518-201ENSMUST00000122075 779 ntBASIC7.9□□□□□ -1.14
Trim42Q9D2H5 H2afy3-201ENSMUST00000151919 1112 ntBASIC7.9□□□□□ -1.14
Trim42Q9D2H5 Gm22895-201ENSMUST00000157508 308 ntBASIC7.9□□□□□ -1.14
Trim42Q9D2H5 Gm23022-201ENSMUST00000158768 180 ntBASIC7.9□□□□□ -1.14
Trim42Q9D2H5 Mir3100-201ENSMUST00000174918 65 ntBASIC7.9□□□□□ -1.14
Trim42Q9D2H5 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Trim42Q9D2H5 1700030O20Rik-201ENSMUST00000185546 594 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Trim42Q9D2H5 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Trim42Q9D2H5 Gm18181-201ENSMUST00000190670 736 ntBASIC7.9□□□□□ -1.14
Trim42Q9D2H5 Gm37282-201ENSMUST00000191987 164 ntBASIC7.9□□□□□ -1.14
Trim42Q9D2H5 Gm37665-201ENSMUST00000192353 149 ntBASIC7.9□□□□□ -1.14
Trim42Q9D2H5 Olfr1398-ps1-201ENSMUST00000193866 929 ntBASIC7.9□□□□□ -1.14
Trim42Q9D2H5 Serpinb10-203ENSMUST00000194951 1194 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
Trim42Q9D2H5 Gm43835-201ENSMUST00000195932 149 ntBASIC7.9□□□□□ -1.14
Trim42Q9D2H5 Cdk2ap1-205ENSMUST00000196910 483 ntAPPRIS ALT1 TSL 2 BASIC7.9□□□□□ -1.14
Trim42Q9D2H5 Gm43535-201ENSMUST00000197846 164 ntBASIC7.9□□□□□ -1.14
Trim42Q9D2H5 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
Trim42Q9D2H5 Gm42917-201ENSMUST00000200668 928 ntTSL 3 BASIC7.9□□□□□ -1.14
Trim42Q9D2H5 Gm44432-201ENSMUST00000203342 938 ntBASIC7.9□□□□□ -1.14
Trim42Q9D2H5 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Trim42Q9D2H5 Gm44379-201ENSMUST00000204501 164 ntBASIC7.9□□□□□ -1.14
Trim42Q9D2H5 Gm44268-201ENSMUST00000204814 164 ntBASIC7.9□□□□□ -1.14
Trim42Q9D2H5 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Trim42Q9D2H5 AC154264.2-201ENSMUST00000216569 403 ntTSL 5 BASIC7.9□□□□□ -1.14
Trim42Q9D2H5 AC122360.1-201ENSMUST00000217737 624 ntBASIC7.9□□□□□ -1.14
Trim42Q9D2H5 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC7.9□□□□□ -1.14
Trim42Q9D2H5 AC131187.2-201ENSMUST00000223936 994 ntBASIC7.9□□□□□ -1.14
Trim42Q9D2H5 Tcl1b4-201ENSMUST00000000718 1031 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.14
Trim42Q9D2H5 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Trim42Q9D2H5 Fxyd5-201ENSMUST00000009831 803 ntAPPRIS ALT2 TSL 3 BASIC7.9□□□□□ -1.14
Trim42Q9D2H5 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
Trim42Q9D2H5 Gm43534-201ENSMUST00000197685 2853 ntBASIC7.9□□□□□ -1.15
Trim42Q9D2H5 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Trim42Q9D2H5 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.15
Trim42Q9D2H5 Gm2163-201ENSMUST00000179734 2723 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.15
Trim42Q9D2H5 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
Trim42Q9D2H5 Gm38381-201ENSMUST00000193594 2275 ntBASIC7.9□□□□□ -1.15
Trim42Q9D2H5 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.15
Trim42Q9D2H5 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
Trim42Q9D2H5 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
Trim42Q9D2H5 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
Trim42Q9D2H5 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
Trim42Q9D2H5 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC7.9□□□□□ -1.15
Trim42Q9D2H5 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
Trim42Q9D2H5 Ccdc39-201ENSMUST00000029222 3606 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Trim42Q9D2H5 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC7.9□□□□□ -1.15
Trim42Q9D2H5 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC7.9□□□□□ -1.15
Trim42Q9D2H5 Vmn1r51-213ENSMUST00000228880 4353 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Gm43953-201ENSMUST00000203709 2867 ntBASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Klrb1c-203ENSMUST00000174404 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 AL589871.1-201ENSMUST00000221299 3561 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Olfr190-203ENSMUST00000216495 8240 ntAPPRIS P1 TSL 3 BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Glod4-209ENSMUST00000170710 1445 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Gm33543-202ENSMUST00000210336 1428 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Arfgef1-201ENSMUST00000088615 6978 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Olfr998-202ENSMUST00000215083 1399 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Dyrk1a-201ENSMUST00000023614 5754 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Slco2b1-202ENSMUST00000107086 3993 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Spin2c-201ENSMUST00000049999 1309 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Pclaf-201ENSMUST00000045802 2188 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Blvrb-203ENSMUST00000108358 951 ntTSL 3 BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Gm15484-201ENSMUST00000118871 828 ntBASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Mup-ps13-201ENSMUST00000120662 545 ntBASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Gm13936-201ENSMUST00000130416 715 ntTSL 3 BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Gm13538-201ENSMUST00000143166 548 ntTSL 3 BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Gm8224-201ENSMUST00000166178 497 ntBASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Gm2959-201ENSMUST00000169844 621 ntBASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Gm8046-201ENSMUST00000172151 616 ntBASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Zfp422-ps-201ENSMUST00000182230 706 ntBASIC7.89□□□□□ -1.15
Trim42Q9D2H5 2310009A05Rik-201ENSMUST00000184126 496 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Trim42Q9D2H5 Gm27483-201ENSMUST00000184983 71 ntBASIC7.89□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms