Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Ltf-209ENSMUST00000198884 616 ntTSL 5 BASIC7.97□□□□□ -1.13
Smc1aQ9CU62 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC7.97□□□□□ -1.13
Smc1aQ9CU62 Olfr97-202ENSMUST00000207414 933 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Smc1aQ9CU62 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC7.97□□□□□ -1.13
Smc1aQ9CU62 Ccl7-201ENSMUST00000021011 801 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Smc1aQ9CU62 Tbca-204ENSMUST00000220825 497 ntTSL 3 BASIC7.97□□□□□ -1.13
Smc1aQ9CU62 AC133958.1-201ENSMUST00000227085 961 ntBASIC7.97□□□□□ -1.13
Smc1aQ9CU62 Glycam1-204ENSMUST00000228895 641 ntBASIC7.97□□□□□ -1.13
Smc1aQ9CU62 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Smc1aQ9CU62 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Smc1aQ9CU62 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Smc1aQ9CU62 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Smc1aQ9CU62 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
Smc1aQ9CU62 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC7.97□□□□□ -1.13
Smc1aQ9CU62 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Smc1aQ9CU62 Olfr311-203ENSMUST00000216473 2961 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Smc1aQ9CU62 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC7.97□□□□□ -1.13
Smc1aQ9CU62 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
Smc1aQ9CU62 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Smc1aQ9CU62 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC7.97□□□□□ -1.13
Smc1aQ9CU62 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Smc1aQ9CU62 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC7.97□□□□□ -1.13
Smc1aQ9CU62 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC7.97□□□□□ -1.13
Smc1aQ9CU62 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Smc1aQ9CU62 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Smc1aQ9CU62 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
Smc1aQ9CU62 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
Smc1aQ9CU62 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Smc1aQ9CU62 Gm3139-201ENSMUST00000178330 1446 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.13
Smc1aQ9CU62 Gm3183-201ENSMUST00000180076 1446 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.13
Smc1aQ9CU62 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Smc1aQ9CU62 Cd247-209ENSMUST00000187313 2957 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
Smc1aQ9CU62 Pard3bos1-202ENSMUST00000138535 1878 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
Smc1aQ9CU62 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.13
Smc1aQ9CU62 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC7.96□□□□□ -1.13
Smc1aQ9CU62 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Smc1aQ9CU62 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC7.96□□□□□ -1.13
Smc1aQ9CU62 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.13
Smc1aQ9CU62 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Smc1aQ9CU62 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Smc1aQ9CU62 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Smc1aQ9CU62 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
Smc1aQ9CU62 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Smc1aQ9CU62 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC7.96□□□□□ -1.14
Smc1aQ9CU62 Gm15105-201ENSMUST00000117777 204 ntBASIC7.96□□□□□ -1.14
Smc1aQ9CU62 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC7.96□□□□□ -1.14
Smc1aQ9CU62 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC7.96□□□□□ -1.14
Smc1aQ9CU62 Gm15501-202ENSMUST00000140687 625 ntBASIC7.96□□□□□ -1.14
Smc1aQ9CU62 Gm7420-201ENSMUST00000162836 842 ntBASIC7.96□□□□□ -1.14
Smc1aQ9CU62 Gm9286-201ENSMUST00000173586 508 ntBASIC7.96□□□□□ -1.14
Smc1aQ9CU62 Gm8524-201ENSMUST00000186232 379 ntBASIC7.96□□□□□ -1.14
Smc1aQ9CU62 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC7.96□□□□□ -1.14
Smc1aQ9CU62 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC7.96□□□□□ -1.14
Smc1aQ9CU62 Igkv4-77-201ENSMUST00000199410 352 ntBASIC7.96□□□□□ -1.14
Smc1aQ9CU62 5033423K11Rik-202ENSMUST00000202802 1162 ntBASIC7.96□□□□□ -1.14
Smc1aQ9CU62 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC7.96□□□□□ -1.14
Smc1aQ9CU62 Olfr687-202ENSMUST00000218046 1004 ntTSL 5 BASIC7.96□□□□□ -1.14
Smc1aQ9CU62 AC192091.1-201ENSMUST00000218668 439 ntBASIC7.96□□□□□ -1.14
Smc1aQ9CU62 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Smc1aQ9CU62 CT025639.2-201ENSMUST00000224440 1220 ntBASIC7.96□□□□□ -1.14
Smc1aQ9CU62 CT009711.2-202ENSMUST00000224538 973 ntBASIC7.96□□□□□ -1.14
Smc1aQ9CU62 AC158954.1-201ENSMUST00000228272 1006 ntBASIC7.96□□□□□ -1.14
Smc1aQ9CU62 Car1-201ENSMUST00000094365 1180 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Smc1aQ9CU62 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Smc1aQ9CU62 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Smc1aQ9CU62 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC7.96□□□□□ -1.14
Smc1aQ9CU62 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC7.96□□□□□ -1.14
Smc1aQ9CU62 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Smc1aQ9CU62 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Smc1aQ9CU62 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Smc1aQ9CU62 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC7.96□□□□□ -1.14
Smc1aQ9CU62 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Smc1aQ9CU62 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Smc1aQ9CU62 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Smc1aQ9CU62 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.14
Smc1aQ9CU62 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC7.95□□□□□ -1.14
Smc1aQ9CU62 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC7.95□□□□□ -1.14
Smc1aQ9CU62 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Smc1aQ9CU62 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Smc1aQ9CU62 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC7.95□□□□□ -1.14
Smc1aQ9CU62 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Smc1aQ9CU62 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
Smc1aQ9CU62 Olfr190-203ENSMUST00000216495 8240 ntAPPRIS P1 TSL 3 BASIC7.95□□□□□ -1.14
Smc1aQ9CU62 A530058O07Rik-201ENSMUST00000222059 3364 ntBASIC7.95□□□□□ -1.14
Smc1aQ9CU62 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Smc1aQ9CU62 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Smc1aQ9CU62 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC7.95□□□□□ -1.14
Smc1aQ9CU62 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Smc1aQ9CU62 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Smc1aQ9CU62 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Smc1aQ9CU62 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC7.95□□□□□ -1.14
Smc1aQ9CU62 Tmc2-201ENSMUST00000077988 3216 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Smc1aQ9CU62 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC7.95□□□□□ -1.14
Smc1aQ9CU62 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Smc1aQ9CU62 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Smc1aQ9CU62 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC7.95□□□□□ -1.14
Smc1aQ9CU62 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Smc1aQ9CU62 Gm5228-201ENSMUST00000117186 357 ntBASIC7.95□□□□□ -1.14
Smc1aQ9CU62 Gm15047-201ENSMUST00000118891 454 ntBASIC7.95□□□□□ -1.14
Smc1aQ9CU62 Olfr634-ps1-201ENSMUST00000119267 955 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms