Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Gm13545-201ENSMUST00000119044 482 ntBASIC6.9□□□□□ -1.3
Trim16Q99PP9 Gm14787-201ENSMUST00000121236 388 ntBASIC6.9□□□□□ -1.3
Trim16Q99PP9 Mrpl48-ps-201ENSMUST00000121413 636 ntBASIC6.9□□□□□ -1.3
Trim16Q99PP9 Gm10157-201ENSMUST00000139408 343 ntBASIC6.9□□□□□ -1.3
Trim16Q99PP9 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC6.9□□□□□ -1.3
Trim16Q99PP9 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Trim16Q99PP9 9530046B11Rik-201ENSMUST00000149413 1157 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Trim16Q99PP9 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Trim16Q99PP9 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.3
Trim16Q99PP9 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC6.9□□□□□ -1.3
Trim16Q99PP9 Gm27617-201ENSMUST00000184321 168 ntBASIC6.9□□□□□ -1.3
Trim16Q99PP9 Gm7341-201ENSMUST00000192183 926 ntBASIC6.9□□□□□ -1.3
Trim16Q99PP9 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Trim16Q99PP9 Gm43040-201ENSMUST00000202399 558 ntBASIC6.9□□□□□ -1.3
Trim16Q99PP9 Gm44036-201ENSMUST00000204551 336 ntTSL 3 BASIC6.9□□□□□ -1.3
Trim16Q99PP9 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Trim16Q99PP9 AC124778.1-201ENSMUST00000216013 162 ntBASIC6.9□□□□□ -1.3
Trim16Q99PP9 RMST_1.1-213ENSMUST00000220288 792 ntTSL 5 BASIC6.9□□□□□ -1.3
Trim16Q99PP9 Gm19428-202ENSMUST00000220573 1038 ntTSL 5 BASIC6.9□□□□□ -1.3
Trim16Q99PP9 AC160114.3-201ENSMUST00000222256 560 ntTSL 5 BASIC6.9□□□□□ -1.3
Trim16Q99PP9 AC124183.1-201ENSMUST00000222367 2135 ntBASIC6.9□□□□□ -1.3
Trim16Q99PP9 AL591207.2-201ENSMUST00000222991 337 ntBASIC6.9□□□□□ -1.3
Trim16Q99PP9 AC159205.2-201ENSMUST00000223759 816 ntBASIC6.9□□□□□ -1.3
Trim16Q99PP9 Diaph3-204ENSMUST00000226254 682 ntBASIC6.9□□□□□ -1.3
Trim16Q99PP9 AC140267.1-201ENSMUST00000226485 213 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Trim16Q99PP9 Ropn1-201ENSMUST00000023530 875 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Trim16Q99PP9 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Trim16Q99PP9 Gm2108-201ENSMUST00000165058 2177 ntBASIC6.9□□□□□ -1.3
Trim16Q99PP9 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Trim16Q99PP9 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Trim16Q99PP9 Gm38262-201ENSMUST00000194760 1382 ntBASIC6.9□□□□□ -1.31
Trim16Q99PP9 Gm31267-201ENSMUST00000218941 1397 ntTSL 3 BASIC6.9□□□□□ -1.31
Trim16Q99PP9 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Trim16Q99PP9 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Trim16Q99PP9 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
Trim16Q99PP9 AC158988.1-201ENSMUST00000226731 2624 ntBASIC6.9□□□□□ -1.31
Trim16Q99PP9 Gm18508-201ENSMUST00000215790 1642 ntBASIC6.9□□□□□ -1.31
Trim16Q99PP9 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Trim16Q99PP9 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
Trim16Q99PP9 AC164567.3-201ENSMUST00000217743 2869 ntBASIC6.9□□□□□ -1.31
Trim16Q99PP9 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
Trim16Q99PP9 Gm45887-201ENSMUST00000212672 2998 ntBASIC6.9□□□□□ -1.31
Trim16Q99PP9 Gm37043-201ENSMUST00000194609 3105 ntBASIC6.9□□□□□ -1.31
Trim16Q99PP9 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Trim16Q99PP9 Etv1-203ENSMUST00000160244 2032 ntTSL 5 BASIC6.89□□□□□ -1.31
Trim16Q99PP9 Akap10-201ENSMUST00000058173 2015 ntTSL 2 BASIC6.89□□□□□ -1.31
Trim16Q99PP9 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim16Q99PP9 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Trim16Q99PP9 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim16Q99PP9 Gm37730-201ENSMUST00000192432 2211 ntBASIC6.89□□□□□ -1.31
Trim16Q99PP9 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Trim16Q99PP9 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim16Q99PP9 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim16Q99PP9 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Trim16Q99PP9 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Trim16Q99PP9 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim16Q99PP9 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim16Q99PP9 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim16Q99PP9 Plac1-202ENSMUST00000114843 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim16Q99PP9 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC6.89□□□□□ -1.31
Trim16Q99PP9 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Trim16Q99PP9 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC6.89□□□□□ -1.31
Trim16Q99PP9 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC6.89□□□□□ -1.31
Trim16Q99PP9 Gm22035-201ENSMUST00000157284 228 ntBASIC6.89□□□□□ -1.31
Trim16Q99PP9 Gm22882-201ENSMUST00000157749 124 ntBASIC6.89□□□□□ -1.31
Trim16Q99PP9 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC6.89□□□□□ -1.31
Trim16Q99PP9 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC6.89□□□□□ -1.31
Trim16Q99PP9 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC6.89□□□□□ -1.31
Trim16Q99PP9 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC6.89□□□□□ -1.31
Trim16Q99PP9 Gm5300-201ENSMUST00000182201 1003 ntBASIC6.89□□□□□ -1.31
Trim16Q99PP9 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Trim16Q99PP9 Gm18699-201ENSMUST00000190713 243 ntBASIC6.89□□□□□ -1.31
Trim16Q99PP9 Pdc-204ENSMUST00000191228 1235 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim16Q99PP9 2010103J01Rik-201ENSMUST00000192375 388 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Trim16Q99PP9 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC6.89□□□□□ -1.31
Trim16Q99PP9 Gm44979-201ENSMUST00000206218 287 ntBASIC6.89□□□□□ -1.31
Trim16Q99PP9 Gm45319-201ENSMUST00000210220 318 ntBASIC6.89□□□□□ -1.31
Trim16Q99PP9 Gm8058-201ENSMUST00000217247 587 ntBASIC6.89□□□□□ -1.31
Trim16Q99PP9 AC165287.1-201ENSMUST00000224985 178 ntBASIC6.89□□□□□ -1.31
Trim16Q99PP9 Mphosph6-201ENSMUST00000034303 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim16Q99PP9 H2-M11-201ENSMUST00000041964 1006 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim16Q99PP9 Olfr1262-201ENSMUST00000061701 1024 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Trim16Q99PP9 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Trim16Q99PP9 Gm26545-201ENSMUST00000181082 1746 ntTSL 5 BASIC6.89□□□□□ -1.31
Trim16Q99PP9 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Trim16Q99PP9 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC6.89□□□□□ -1.31
Trim16Q99PP9 Gm12346-201ENSMUST00000121455 2255 ntBASIC6.89□□□□□ -1.31
Trim16Q99PP9 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Trim16Q99PP9 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim16Q99PP9 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim16Q99PP9 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim16Q99PP9 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
Trim16Q99PP9 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Trim16Q99PP9 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Trim16Q99PP9 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trim16Q99PP9 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
Trim16Q99PP9 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Trim16Q99PP9 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trim16Q99PP9 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Trim16Q99PP9 Gm36930-201ENSMUST00000195431 2376 ntBASIC6.88□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms