Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm44228-201ENSMUST00000204888 2026 ntBASIC8.24□□□□□ -1.09
Clp1Q99LI9 Tmem18-201ENSMUST00000057151 2971 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Clp1Q99LI9 Nme8-201ENSMUST00000039340 1704 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Clp1Q99LI9 Tmem63c-201ENSMUST00000110187 3327 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Clp1Q99LI9 4930543E12Rik-202ENSMUST00000210408 1429 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Clp1Q99LI9 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC8.24□□□□□ -1.09
Clp1Q99LI9 Gm25276-201ENSMUST00000104300 124 ntBASIC8.24□□□□□ -1.09
Clp1Q99LI9 Gm25344-201ENSMUST00000104503 132 ntBASIC8.24□□□□□ -1.09
Clp1Q99LI9 Gm13414-201ENSMUST00000117516 727 ntBASIC8.24□□□□□ -1.09
Clp1Q99LI9 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC8.24□□□□□ -1.09
Clp1Q99LI9 Gm12773-201ENSMUST00000120134 587 ntBASIC8.24□□□□□ -1.09
Clp1Q99LI9 4930555O08Rik-201ENSMUST00000122821 668 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Clp1Q99LI9 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Clp1Q99LI9 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC8.24□□□□□ -1.09
Clp1Q99LI9 Gm23317-201ENSMUST00000157999 129 ntBASIC8.24□□□□□ -1.09
Clp1Q99LI9 Gm36961-201ENSMUST00000191980 132 ntBASIC8.24□□□□□ -1.09
Clp1Q99LI9 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Clp1Q99LI9 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC8.24□□□□□ -1.09
Clp1Q99LI9 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Clp1Q99LI9 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Clp1Q99LI9 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC8.24□□□□□ -1.09
Clp1Q99LI9 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC8.24□□□□□ -1.09
Clp1Q99LI9 Gm18860-201ENSMUST00000212029 764 ntBASIC8.24□□□□□ -1.09
Clp1Q99LI9 AC147101.1-201ENSMUST00000217964 312 ntBASIC8.24□□□□□ -1.09
Clp1Q99LI9 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC8.24□□□□□ -1.09
Clp1Q99LI9 Gm8275-201ENSMUST00000219732 424 ntBASIC8.24□□□□□ -1.09
Clp1Q99LI9 AC134414.1-201ENSMUST00000228499 1221 ntBASIC8.24□□□□□ -1.09
Clp1Q99LI9 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Clp1Q99LI9 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Clp1Q99LI9 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Clp1Q99LI9 Tma16-201ENSMUST00000026681 4328 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Clp1Q99LI9 Olfr221-201ENSMUST00000052560 2741 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Clp1Q99LI9 Cnksr3-202ENSMUST00000150282 2554 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Clp1Q99LI9 Zic4-201ENSMUST00000066384 3891 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Clp1Q99LI9 Ogdhl-201ENSMUST00000022480 3449 ntAPPRIS P2 TSL 5 BASIC8.24□□□□□ -1.09
Clp1Q99LI9 Zfp474-202ENSMUST00000209270 2113 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Clp1Q99LI9 Gm14445-201ENSMUST00000117051 1484 ntBASIC8.24□□□□□ -1.09
Clp1Q99LI9 AC151904.1-201ENSMUST00000219945 1498 ntBASIC8.24□□□□□ -1.09
Clp1Q99LI9 Rnase6-202ENSMUST00000226194 2452 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Clp1Q99LI9 Dnajc6-203ENSMUST00000106929 5128 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
Clp1Q99LI9 Aplnr-201ENSMUST00000057019 3699 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Clp1Q99LI9 Adgrg1-201ENSMUST00000093271 3574 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Clp1Q99LI9 Gm2163-201ENSMUST00000179734 2723 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Clp1Q99LI9 Spata1-202ENSMUST00000093951 2712 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Clp1Q99LI9 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Clp1Q99LI9 Tlk2-203ENSMUST00000106939 5494 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
Clp1Q99LI9 Vmn1r16-202ENSMUST00000227283 5813 ntAPPRIS P2 BASIC8.23□□□□□ -1.09
Clp1Q99LI9 B130021K23Rik-201ENSMUST00000205226 2593 ntBASIC8.23□□□□□ -1.09
Clp1Q99LI9 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Clp1Q99LI9 Gm21560-201ENSMUST00000168480 2066 ntAPPRIS P5 TSL 5 BASIC8.23□□□□□ -1.09
Clp1Q99LI9 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC8.23□□□□□ -1.09
Clp1Q99LI9 Gli3-201ENSMUST00000110510 8170 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Clp1Q99LI9 Map3k13-201ENSMUST00000042065 6709 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Clp1Q99LI9 Gm43023-201ENSMUST00000197583 2106 ntBASIC8.23□□□□□ -1.09
Clp1Q99LI9 Gm42907-201ENSMUST00000199793 2148 ntBASIC8.23□□□□□ -1.09
Clp1Q99LI9 Ctnnd1-213ENSMUST00000111687 6030 ntTSL 5 BASIC8.23□□□□□ -1.09
Clp1Q99LI9 Tmem100-201ENSMUST00000092788 1767 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Clp1Q99LI9 Lilrb4a-203ENSMUST00000219696 1441 ntAPPRIS P5 TSL 1 (best) BASIC8.23□□□□□ -1.09
Clp1Q99LI9 Spp1-201ENSMUST00000031243 1410 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
Clp1Q99LI9 Hecw1-201ENSMUST00000110516 9460 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Clp1Q99LI9 Tmem144-201ENSMUST00000029568 2898 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Clp1Q99LI9 Rin3-204ENSMUST00000133820 3755 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Clp1Q99LI9 Kcnj15-201ENSMUST00000037154 5089 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Clp1Q99LI9 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC8.23□□□□□ -1.09
Clp1Q99LI9 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Clp1Q99LI9 Gm14279-201ENSMUST00000117142 332 ntBASIC8.23□□□□□ -1.09
Clp1Q99LI9 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC8.23□□□□□ -1.09
Clp1Q99LI9 Gm10243-201ENSMUST00000117571 333 ntBASIC8.23□□□□□ -1.09
Clp1Q99LI9 Gm12387-201ENSMUST00000118573 955 ntBASIC8.23□□□□□ -1.09
Clp1Q99LI9 Gm13252-201ENSMUST00000119355 321 ntBASIC8.23□□□□□ -1.09
Clp1Q99LI9 Gm16523-201ENSMUST00000121253 592 ntBASIC8.23□□□□□ -1.09
Clp1Q99LI9 Gm12807-201ENSMUST00000121546 962 ntBASIC8.23□□□□□ -1.09
Clp1Q99LI9 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC8.23□□□□□ -1.09
Clp1Q99LI9 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Clp1Q99LI9 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC8.23□□□□□ -1.09
Clp1Q99LI9 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC8.23□□□□□ -1.09
Clp1Q99LI9 Gm22186-201ENSMUST00000157822 122 ntBASIC8.23□□□□□ -1.09
Clp1Q99LI9 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC8.23□□□□□ -1.09
Clp1Q99LI9 Gm2619-202ENSMUST00000166777 651 ntBASIC8.23□□□□□ -1.09
Clp1Q99LI9 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Clp1Q99LI9 Gm22698-201ENSMUST00000175375 108 ntBASIC8.23□□□□□ -1.09
Clp1Q99LI9 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Clp1Q99LI9 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC8.23□□□□□ -1.09
Clp1Q99LI9 Gm25120-201ENSMUST00000180148 79 ntBASIC8.23□□□□□ -1.09
Clp1Q99LI9 Mir6921-201ENSMUST00000183719 80 ntBASIC8.23□□□□□ -1.09
Clp1Q99LI9 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
Clp1Q99LI9 Gm18350-201ENSMUST00000187395 955 ntBASIC8.23□□□□□ -1.09
Clp1Q99LI9 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Clp1Q99LI9 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC8.23□□□□□ -1.09
Clp1Q99LI9 Gm42775-201ENSMUST00000198407 740 ntTSL 3 BASIC8.23□□□□□ -1.09
Clp1Q99LI9 Gm9023-201ENSMUST00000198408 1038 ntBASIC8.23□□□□□ -1.09
Clp1Q99LI9 Gm42625-201ENSMUST00000198611 922 ntBASIC8.23□□□□□ -1.09
Clp1Q99LI9 Ltf-209ENSMUST00000198884 616 ntTSL 5 BASIC8.23□□□□□ -1.09
Clp1Q99LI9 Gm2505-201ENSMUST00000200413 825 ntBASIC8.23□□□□□ -1.09
Clp1Q99LI9 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC8.23□□□□□ -1.09
Clp1Q99LI9 Gm9373-201ENSMUST00000208724 599 ntBASIC8.23□□□□□ -1.09
Clp1Q99LI9 Gm7419-201ENSMUST00000209962 925 ntBASIC8.23□□□□□ -1.09
Clp1Q99LI9 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC8.23□□□□□ -1.09
Clp1Q99LI9 Gm39383-201ENSMUST00000216894 1009 ntTSL 5 BASIC8.23□□□□□ -1.09
Clp1Q99LI9 AC163296.1-202ENSMUST00000218395 661 ntBASIC8.23□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms