Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm22781-201ENSMUST00000104083 137 ntBASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Gm25498-201ENSMUST00000104424 129 ntBASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Atp5h-203ENSMUST00000106537 682 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Gm14869-201ENSMUST00000119007 884 ntBASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Gm11338-201ENSMUST00000120086 1160 ntBASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Gm16284-201ENSMUST00000140995 400 ntBASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Gm8332-201ENSMUST00000179468 435 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Gm2035-201ENSMUST00000180053 435 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Brf1Q8CFK2 B230104I21Rik-201ENSMUST00000181143 876 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Gm8245-201ENSMUST00000182434 987 ntBASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Gm28119-201ENSMUST00000185538 298 ntTSL 5 BASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Gm8524-201ENSMUST00000186232 379 ntBASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Gm18875-201ENSMUST00000188563 882 ntBASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Gm10416-201ENSMUST00000197379 645 ntBASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Gm18430-201ENSMUST00000197534 682 ntBASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Gm44833-201ENSMUST00000208368 331 ntBASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Gm19092-201ENSMUST00000209036 969 ntBASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Gm9231-201ENSMUST00000220817 1009 ntBASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Gm19189-201ENSMUST00000221689 754 ntBASIC8.48□□□□□ -1.05
Brf1Q8CFK2 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC8.48□□□□□ -1.05
Brf1Q8CFK2 AC125405.2-201ENSMUST00000227862 383 ntBASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Cfap126-201ENSMUST00000027959 1034 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Tmem213-201ENSMUST00000031851 631 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Insig2-202ENSMUST00000071064 1292 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Brf1Q8CFK2 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Gm23734-201ENSMUST00000083753 109 ntBASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Psma2-201ENSMUST00000170836 2911 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Gm42653-201ENSMUST00000200644 2839 ntBASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Fbxw10-205ENSMUST00000176577 3254 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Brf1Q8CFK2 Gm5702-201ENSMUST00000185629 2469 ntBASIC8.47□□□□□ -1.05
Brf1Q8CFK2 Tor1aip2-202ENSMUST00000065648 2529 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Brf1Q8CFK2 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Brf1Q8CFK2 Gm14802-201ENSMUST00000121944 1885 ntBASIC8.47□□□□□ -1.05
Brf1Q8CFK2 A630072L19Rik-201ENSMUST00000180617 3405 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Brf1Q8CFK2 Pde10a-204ENSMUST00000115715 2783 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Brf1Q8CFK2 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Brf1Q8CFK2 Serpinb8-201ENSMUST00000000514 3001 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Brf1Q8CFK2 Sec24c-202ENSMUST00000223751 4196 ntBASIC8.47□□□□□ -1.05
Brf1Q8CFK2 AC107453.1-201ENSMUST00000227490 3268 ntBASIC8.47□□□□□ -1.05
Brf1Q8CFK2 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Brf1Q8CFK2 Trav13n-4-201ENSMUST00000103634 267 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Brf1Q8CFK2 Gm25379-201ENSMUST00000104338 114 ntBASIC8.47□□□□□ -1.05
Brf1Q8CFK2 Gm23527-201ENSMUST00000104570 130 ntBASIC8.47□□□□□ -1.05
Brf1Q8CFK2 Gm14745-201ENSMUST00000118480 1096 ntBASIC8.47□□□□□ -1.05
Brf1Q8CFK2 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Brf1Q8CFK2 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Brf1Q8CFK2 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC8.47□□□□□ -1.05
Brf1Q8CFK2 Gm23077-201ENSMUST00000157854 116 ntBASIC8.47□□□□□ -1.05
Brf1Q8CFK2 Gm17022-201ENSMUST00000166415 922 ntBASIC8.47□□□□□ -1.05
Brf1Q8CFK2 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Brf1Q8CFK2 Gm28958-201ENSMUST00000185864 703 ntBASIC8.47□□□□□ -1.05
Brf1Q8CFK2 Gm37270-201ENSMUST00000194277 330 ntBASIC8.47□□□□□ -1.05
Brf1Q8CFK2 Gm30517-201ENSMUST00000197350 772 ntBASIC8.47□□□□□ -1.05
Brf1Q8CFK2 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC8.47□□□□□ -1.05
Brf1Q8CFK2 Gm42804-201ENSMUST00000199701 178 ntBASIC8.47□□□□□ -1.05
Brf1Q8CFK2 Gm45181-201ENSMUST00000207878 449 ntTSL 3 BASIC8.47□□□□□ -1.05
Brf1Q8CFK2 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC8.47□□□□□ -1.05
Brf1Q8CFK2 AC156790.1-201ENSMUST00000226572 559 ntBASIC8.47□□□□□ -1.05
Brf1Q8CFK2 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Brf1Q8CFK2 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Brf1Q8CFK2 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Brf1Q8CFK2 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Brf1Q8CFK2 Gm44553-201ENSMUST00000206316 2037 ntBASIC8.47□□□□□ -1.05
Brf1Q8CFK2 Fbxo16-204ENSMUST00000226005 3700 ntAPPRIS ALT2 BASIC8.47□□□□□ -1.05
Brf1Q8CFK2 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Brf1Q8CFK2 Huwe1-201ENSMUST00000026292 14579 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Brf1Q8CFK2 Sla-201ENSMUST00000100572 2626 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
Brf1Q8CFK2 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Brf1Q8CFK2 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Brf1Q8CFK2 AC153962.2-202ENSMUST00000219391 1382 ntTSL 5 BASIC8.47□□□□□ -1.05
Brf1Q8CFK2 Sgo1-201ENSMUST00000024736 3628 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Brf1Q8CFK2 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Brf1Q8CFK2 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC8.46□□□□□ -1.05
Brf1Q8CFK2 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Brf1Q8CFK2 Heatr1-201ENSMUST00000059270 6780 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 107.4 ms